KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112256067
Entry
112256067         CDS       T05605                                 
Name
(RefSeq) lysine-specific demethylase 3B isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:otw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:otw03036]
    112256067
Enzymes [BR:otw01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     112256067
Chromosome and associated proteins [BR:otw03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    112256067
SSDB
Motif
Pfam: PWWP_KDM3B Tudor_KDM3B JmjC DUF7030 Cupin_2 C1_2
Other DBs
NCBI-GeneID: 112256067
NCBI-ProteinID: XP_024284791
LinkDB
Position
LG08:66679162..66702059
AA seq 1840 aa
MGDSLELIGKRLLLLLSDGRSAAGPEAEQSTWTRDWLRGTVRAVSVIGLASPGVEVSGGE
ATTTAAAGLTVFVEFEDCAWRRRSWVQVYGEEVRAVLVESAIVWANCSQPNQNHPAAGVT
SGTAWPALAFRCLVDRVGLGSLVPVEFFGSRTLDFLPDGNSLQRFETAKDVRHSLLLEQP
SLQAAVSSWHSDFELQEILRKGSYTVQGRKVQVYQCEFEEHWALGLVSRHDPKSHIMEIT
MDQGEETQVVDPRVIHVMLAEDYFDEKGKNARRRKESDGGKGESGRRRRTASEGEEDMTL
KRFKGSGEGAADGQNGSGSTKASEEGMVTWGAELAGGGRRVNSSSSEVTQVYASPNSTSS
QMDQSNTPPRYTKENGRAISTQDRQGSADSTTTATPTPPPLKQAPSPFSNTSFPSLGQMP
SLVPGALAPKPSPAGPTLEREEPSQSTNPKMAALVSPGPVTISSPSQASAPSVALSASLG
FSPKPPVWKGTTNQSEGSKTPILAAAGFRLPQSKPAGASVFGEVSSKTSASSNTPSASQD
SSRPFGFAFGGTKNNKAQPQQQDQNLFFQCMTGQKTGQNPGGPNQTPGQSQSKDTNYFTA
VSESLSKKPPSLFKPSVLAPASAGLFSSATASLKEQSKVPETQSAGNGVLNKNFAGDKLS
PSFSSGSGGMRCSGLVMGAMDTPALGGANNRSGSNGVAVGGFGTKTDSHQNLFLQGSKEP
SNPFLAYGEKLSHSPFSGKPAPLEPETLGPSSASESKSNLFTMVELPKGILSSPFVSLSA
ATASSSSSPAPGFTQRPKSVTSSKPKESSSTGDQGSSVEGGSLDDRPSSTLGFPMFGSAV
AGGSGENAPMPFDQGQAQKFALEERGQASKRDSDSSDNSDLSDLSETEEGLERGHAPGGL
VGPVKEGAMLLQKGKGPGVAKSRPRNKPFKVGQSVLKDVTKVRRLKQSGESFLQDGSCIN
VAPHLHKCRECRMERYRKYREQEPDDDDPNVACRFFHFRRLAFTRKGILRVEGFLSPQQS
DAMAMGLWLPSPSVQEGLDLDTSKYILANVGDQFCQLVMSEKEAMMMVEPHQKVAWKRAV
RGVREMCDVCETTVFNIHWVCRKCGFGVCLDCYRQRRNRPMEEVDEGPDDEVFSWLKCVK
GQRHEPQNLMPTQIIPGTALYNIGDMVHSARGKWGIKANCPCTSRHHRPLVRPSAPNGIS
QQSAVSSSTGSSGSGPITGGGGPAGSTTPKPEGAEMTVVKTEPTSTTTSEGGGGVDTNGA
NHTSATPNPAQTPTPKDPRPSTGEGNSTALHWLADLATQKAKVEDTKDSGSMRSVMGRDT
RSPFGLDSFSALSKPSSSSSSPKLFNSLLLGSSNSQPKPEGSSLRDLLNSGPGRLPQGPG
DSGVTFPSVFSTSVAGDKLKGSLPNFLDHIIASVVETKKAEGRRLGEGGSELGGVGRRDG
VMGLSVLDPHTSHSWLCDGRLLCLQDPSNTNNWKIFRECWKQGQPVLVSGIHKRLKGALW
RPEAFSEEFGDQDVDLVNCRNCAIISDVKVRDFWDGFQIISKRLKGSDGQPMVLKLKDWP
PGEDFRDMMPTRFDDLMDNLPLPEYTKRDGRLNLASRLPNFFVRPDLGPKMYNAYGLMET
EDRSVGTTNLHLDVSDAVNVMVYVGIPEGEGDHVKEMDIAGCKEVMTTIEEGDVDEMTKR
RVYEAKEKPGALWHIYSAKDAEKIRELLRKVGEEQGQENPPDHDPIHDQSWYLDGVLRRR
LYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNLYSCIKVAEDFVSPEHVKHCFRLTQEFR
HLSTTHSNHEDKLQVKNIIYHAVKDAVGTLRAHEPKLARS
NT seq 5523 nt   +upstreamnt  +downstreamnt
atgggggactctcttgaactgattgggaagcgacttctactgctcctcagcgatggaagg
tccgcagccggacccgaagcggagcagtccacttggactcgcgactggctccggggaacc
gtccgggctgtcagcgtcataggtttggccagcccaggggtagaggtgagcggaggagag
gcgacaacaacagcagctgcggggctgacggtgtttgtggagtttgaggactgtgcgtgg
cgcaggcgctcctgggtacaggtgtatggggaggaggtgagagctgtactggtagagagt
gccattgtctgggctaactgcagtcagcccaaccagaaccaccctgcagctggagtaacc
tctgggacagcctggccagctctggcattccggtgtctagtggaccgtgtgggtctgggt
tccctggtcccagtggagttctttgggagcagaaccctggacttcctccctgacgggaat
tcactccagagatttgagacagcgaaagacgtgaggcactctctcctactggagcagcct
tctctgcaggctgcagtttccagctggcacagtgactttgagctgcaggagatcctcagg
aagggctcctacaccgtccagggccggaaggttcaggtgtaccagtgtgagtttgaggag
cactgggccctgggcttggtctctcggcacgaccccaaatcacacatcatggagatcacc
atggaccagggagaggagactcaggtggtggatccccgggtaatacatgtgatgctggct
gaagattactttgatgagaaagggaagaatgctcgacggaggaaggagagcgacgggggg
aagggcgagagcggccgtagacggaggacagcctcggagggcgaggaggacatgaccctg
aagcgctttaagggttcgggagagggagccgcagacggacagaacgggagtggctccacc
aaggcctctgaagaggggatggtgacatggggagcagagttagcaggaggaggacgcaga
gtgaacagcagttcctctgaagtcacacaggtttacgcctccccgaacagcacttcctcc
cagatggaccaatcaaacactccgcctcgctacaccaaggagaatggacgtgccatctcc
acacaagacagacaggggtctgctgactccaccaccacagccacccccactccaccccca
ctcaaacaagccccctcccccttctccaacacttccttcccctctctgggccagatgccc
agcctggtccctggagctttggccccaaagccctccccagcaggacccaccctagagaga
gaagagccatcccagtctaccaaccccaagatggctgccctagtctccccaggcccggtg
accatatcatccccatctcaagccagtgcccccagcgtggctctctctgcctcccttggc
ttcagccccaaaccccctgtctggaaaggaacaaccaaccagtcggagggctctaagact
cccatcctggctgcggctgggttccggctgccccagtccaagcctgctggggcttccgtg
ttcggagaggtgagctccaagaccagcgcttcctccaacacaccgtcagcctcccaggac
tcctctagacccttcggatttgcctttggaggcaccaagaacaacaaggcccaaccgcag
cagcaagaccagaacttattcttccagtgtatgacgggtcagaagactggccagaaccct
ggtggtccgaaccagactccaggtcagagccagtctaaggacaccaactacttcaccgca
gtgtcagagagcttgagtaagaagcctcctagcctgttcaagccctctgttctggccccg
gcatcagctggcctgtttagctcagctacagcttctctcaaagagcagtccaaagtgcct
gagacccaatcggcaggcaacggagtgctcaacaagaattttgcaggggacaaactctca
ccttccttcagcagtggctctggggggatgaggtgttctggtctggtcatgggggcgatg
gacaccccagctctgggtggtgctaacaacaggagtggcagtaacggtgtcgcggtgggc
ggcttcggcaccaagacagacagccaccagaacctgttcctccagggctccaaagagccc
tccaaccccttcctggcctacggggagaagctctcccacagtcccttcagtggcaaacca
gcccctctggagcctgagaccctgggcccgtcttcagcttcggagagcaaatccaacctg
ttcaccatggtcgagctgcccaagggcattctgtcttccccctttgtctccctctcagct
gccactgcctccagttcttcctccccagcccctggcttcacccagaggcccaagtcagtc
acctcctccaagcccaaggagagttcctccacaggagatcagggctcctcagttgagggt
ggttctctggatgaccgacccagctccaccttgggcttccccatgtttgggagtgcagtc
gctggagggagtggtgagaatgcacccatgccttttgaccagggccaggcacaaaagttt
gccctggaggagcgaggtcaggcatctaaacgtgactctgactccagcgacaacagcgac
ctgtcggacctaagtgagacagaggagggtctggagaggggtcatgcacctgggggcctt
gtggggcccgtcaaggagggagccatgctgctgcagaagggtaaagggcccggggtggcc
aagagccggccacgcaacaagcccttcaaagtgggccagtcagtgctgaaggacgtgact
aaggtgcgtcgtctgaagcagtcaggagagtcgttcctgcaggacggctcctgtatcaac
gtggcgccccacctccacaagtgtcgcgagtgtcgcatggagcgctacaggaagtaccgg
gagcaggagcctgacgacgatgaccccaacgtggcctgtcgcttcttccacttccgcagg
ctggcattcacacgtaagggcattctgcgtgtggagggcttcctgagcccccaacagagc
gatgccatggccatgggactgtggcttccctcgccgtccgtacaggagggcctggacctg
gacacctccaagtacatcctggccaacgtgggagaccagttctgtcagctcgtcatgtct
gagaaggaggccatgatgatggttgagccacaccagaaagtggcgtggaagcgtgcggtg
cgcggtgtcagggagatgtgtgacgtatgtgagaccaccgtcttcaacatccactgggtc
tgcaggaagtgtggcttcggggtgtgcctggactgctaccggcaacgcaggaaccgcccc
atggaggaggtggacgaggggcctgatgacgaggtgttctcctggttgaagtgtgtaaag
ggccagagacacgagcctcagaacctcatgcccacacagatcatacctggaactgctctc
tataacataggggatatggtgcactcagctaggggcaaatggggcatcaaggcaaactgc
ccctgcaccagccggcaccacaggcccctagtgcgccctagcgcccccaatggcatctca
cagcagtctgctgtctcttccagcacggggagcagtggtagtggaccaatcacaggtggc
gggggtccagcgggttcaaccactcctaagccagagggggcggagatgacagtggtcaaa
acagagcctacttccaccacaacgtcagaagggggaggaggggttgatactaatggggcc
aaccataccagcgccactccaaaccctgcccagacccccacccccaaagaccctcgcccc
tccacgggtgagggaaactccaccgccttgcactggttggcagaccttgccactcagaaa
gccaaggtggaggacacaaaagattctgggtcgatgcgctctgtgatgggccgggacaca
cgctctcccttcggcctggactcgttcagcgccctgtccaagccttcgtcttcctcctcc
agtcctaaactgttcaacagcctgctgctgggctccagcaacagccagcccaaaccagag
ggctccagcctccgagacctgctcaactctggacccgggaggctcccccagggccccgga
gactctggagtaaccttcccatctgtcttctccacctcagtagctggggacaagttgaag
ggcagcctgcctaacttcctggaccatatcatcgcctcggtggtggagaccaagaaggcg
gagggccgtcgtttgggggagggcggcagtgagctaggcggggttggccgtagggacggg
gttatgggcctcagcgtgctagacccccacacctcccactcctggctctgtgacggacgc
ctgctttgcctgcaggacccctccaacaccaacaactggaagatcttcagagagtgttgg
aaacagggccagccggtgctggtgtctggtatccataagcgtctgaagggggctctgtgg
cggcctgaggccttcagcgaggagtttggggaccaggatgttgacctggtcaactgtcgg
aactgtgccatcatctctgacgtcaaggttcgagacttctgggacggcttccagatcatc
tccaagcgtctgaagggtagtgatggtcagcccatggttttgaagctgaaggactggcct
cctggagaagacttcagagacatgatgcccacacggtttgatgacctaatggacaacctc
cccctcccagagtacactaagagagacggccgtctgaacctggcctcccgcctgcccaac
ttctttgtcaggccagacctggggcctaagatgtataatgcctatggtctgatggagaca
gaagaccggagtgttggcaccaccaacctgcatctggacgtgtctgatgccgtcaacgtt
atggtgtacgtgggcatccctgagggagagggagaccacgtcaaggagatggatatcgct
ggatgtaaagaggtgatgaccaccatcgaagagggtgatgtggatgagatgaccaagagg
agggtgtatgaggccaaggagaagcccggggcactctggcacatctactctgccaaggac
gccgagaagatccgcgagcttctccgcaaggtgggtgaggagcagggccaggagaatccg
ccggaccatgaccctatccacgaccagagctggtacctggacggggtgctgcgcaggagg
ctgtatgaggagtatggtgtgcagggctgggccatcgtacagttcctgggagacgcagtc
ttcattcctgccggggctccccaccaggtccataacctgtacagctgtatcaaggtggcg
gaggactttgtgtctcctgagcacgtgaagcactgtttcagactgacccaggagttcaga
cacctgtccaccacacactccaaccacgaggacaagctgcaggtgaagaacatcatctac
catgccgtaaaggacgctgtggggacactgagggcccacgaacccaagctagcacgctct
tag

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