Oncorhynchus tshawytscha (Chinook salmon): 112256168
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Entry
112256168 CDS
T05605
Name
(RefSeq) transcription initiation factor TFIID subunit 7
KO
K03132
transcription initiation factor TFIID subunit 7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112256168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
otw03021
]
112256168
03036 Chromosome and associated proteins [BR:
otw03036
]
112256168
Transcription machinery [BR:
otw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
112256168
Coactivators
SAGA/TFTC/STAGA complex
112256168
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
112256168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII55_N
Period_C
Motif
Other DBs
NCBI-GeneID:
112256168
NCBI-ProteinID:
XP_024284972
LinkDB
All DBs
Position
LG08:61627867..61641299
Genome browser
AA seq
371 aa
AA seq
DB search
MQNKKTKSTSKIKVGKVGSKNKDDAPHELESQFVLRLPTEYASTVRCIAQSSSMNLKDRL
TIELHADGRHGIVRVDRVPLACKLVDLPCILESLKTVDKKTFYKTADVCQMLVCTLDGDL
YPPLEEPTGTVDPKKKKDKDKDKKFVWNHGITCPLKNTRKRRFRKTAKKKYIESPDVEKE
VKRLLSTDAEAVSVRWEVIAEDETKEADNHGSLANLDSSPGTSGHKMGHGSSAQRDELRE
IFNDISSSSDDEEDEGDLRHEDEDLNIMDMEEDLVRQLQDKLNESSDGARDEADRNNQIV
MEYQMQIDGVKAKLKETRARKKQQEDLIMKVENQALKNRFQALLNEIIHQEEREMEQLAS
LQEQLDSLIEK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacaaaaagaccaaatcgacctccaaaataaaagtggggaaggtcggttcgaaa
aacaaagatgatgcaccccatgagctggagagtcaatttgtcctgcggctgcctacggaa
tatgcctcaacagtgagatgtattgcccagtctagcagcatgaacctcaaagacagactc
accattgaactgcacgctgatggtcgtcatggcatcgtgagagtggatcgtgtacctttg
gcgtgtaaactggtggatctgccctgcatcctggagtctctgaaaacagtggacaagaag
accttctataagactgctgacgtctgtcagatgctggtgtgcacgttggatggagacctc
taccctcccttggaggaacccaccggtactgtagaccccaagaagaagaaggacaaagac
aaggacaagaagtttgtgtggaaccatggcatcacctgtcctctaaagaacacaaggaag
agaagattcaggaagactgcaaaaaaaaagtacatcgagtctcccgacgtggagaaggag
gtgaagagattactgagcacggacgcagaggccgttagtgtccgctgggaggtgatagct
gaggatgagaccaaggaggcagacaaccacggctctctggccaacctggactcatcacct
gggacatcgggacacaagatggggcatggctcctcagcccaacgtgacgagctgagggaa
atcttcaacgacatcagcagcagcagcgatgatgaggaggacgagggggaccttcgtcat
gaggacgaggacctgaacatcatggacatggaggaagacctggttagacagctccaagac
aaactcaacgagtcatcagacggtgctcgggacgaggcagacaggaacaaccagatagtg
atggagtaccagatgcagatagacggtgtgaaggccaagctgaaggagacgcgcgcccgc
aagaaacaacaggaggacctcatcatgaaggtggagaaccaggccctgaagaaccgcttt
caggctctgcttaatgaaattatccaccaggaggagagagagatggagcagctggcctcg
cttcaggagcagctggactcactgatcgaaaagtga
DBGET
integrated database retrieval system
