Oncorhynchus tshawytscha (Chinook salmon): 112256183
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Entry
112256183 CDS
T05605
Symbol
mcf2a
Name
(RefSeq) proto-oncogene DBL isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112256183 (mcf2a)
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112256183 (mcf2a)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
CRAL_TRIO_2
PH
SH3_1
SH3_2
Spectrin
CRAL_TRIO
ADIP
Motif
Other DBs
NCBI-GeneID:
112256183
NCBI-ProteinID:
XP_024285008
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All DBs
Position
LG08:60848159..60880809
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AA seq
1162 aa
AA seq
DB search
MGPASLQEETEQEPGGEMECYHSLLQAGSQLENTLQQVSVPMSMKEVDGYIEKQVAYLSG
GRGEDSSVIITLPEYSAFSDIPEESLAKVLTYLTLIPRARQPGVKFIIILDRRLDTWTSI
KTALARIAASFPGNLHLVLVLRPTSFFQRTVTDLGFRFSQEDFMLKMPVVMLSSVTDLLR
YIDENQLTSEFGGTLDYCHSDWIVLRTAIESFAVTVKDIAQMLQAFGTKLAETELPDEGT
AIVHLLSTHTDKYRKLKEAIWSVSKEGRHLLASLEASGREEDSLWDIRLDWETVQRLLAQ
LRDMESAFDGFFEKHHLKLQQYLQLLRYEHSFQEMELSLERLATQEREVSLSGETLTQTE
QTLRDLDSLEAHAQEEMARAQTIILHGHQLAACHHYAMALIVQRCNELRHRCDTLSKALR
AKHTHLSQTYQLMLRLDQAQSWCDDGAYLLAQQLVEKFQSKEGAQAALKDIDRFLEGAPS
LLSSGHDLLAVEFESVLTPEIQVQIGKTFEKHTAVQEMIHNRQVCLRKLADKHIRPIQLV
APRPENPPRSKSPLFSPKHGVDGLKFSFDLSLPGKRTSRKSPGSRKIEVMHDYQENRSSL
LSSLEGEDSPDLLKRHVMRELIETERVYVEELLSVLLGYRGEMENPGLSGLLPPILQSKK
DILFGNMPEIYNFHSRVFLQDLEGCLETPEGVGACFLERKENFQVYECYCQNKSRSESLW
RQFSDCAFFQECQKKLEHKLGLDSYLLKPVQRLTKYQLLLKELLKYSPGGCEGTSELQGA
LAAMLDLLKSVNDSMHQIAITGYQGELSDLGRVLMQGSFSVWISHKKGPTRMKELARFKP
MQRHLFLYERALLFCKRREEHGEGADKTPSYSFKHCLKMSAVGITENVKGDVKKFEIWYS
GREEVYLVQAPTVEVKMAWLNDLRRILTNQQKLLKGFGCHSHHSPKHTQQRVGLIHLRHP
LSGSLFLSDEHCVNNQMPEHIQLSPPLSESKQQRASISSEDTESGRSSPDPQSHSPQHRR
NRRSWPGAPHSVDICEGLEEWGGGEDPSQPSDTEEEDATQLAPGRYKALAECSRYGPDDL
TIKSGDVIQLQHEDGEGHWLVKNLSRRQEGIIPVPNLHMILGNGSRGQSTRLGGKIQGRP
ESSAPLRGKMLSSSARGTWESG
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgggcccagcttcactgcaggaggagaccgagcaggagccagggggagaaatggagtgc
taccacagccttctgcaggctggctctcagttagagaacacactgcagcaggtgtcagtc
cctatgagtatgaaggaggtggacggctacattgaaaagcaggtggcctacctgtcaggt
gggcgtggtgaggactccagcgtgattatcaccctcccagaatactctgctttcagcgac
attccagaggagtctttagctaaagtcttaacatacctcaccctcatacctcgagcacga
caaccaggtgtaaaattcatcatcattttagacagacgactggatacttggacctcaatc
aaaacagcacttgccagaattgcggcctccttccctgggaacctccacctggtgctggtg
ctgagacccaccagcttcttccagcgcaccgtcacagacctgggcttccgcttcagccag
gaggacttcatgctcaagatgccagtggtgatgctgagctctgtgacagacctactgaga
tacattgatgagaatcaattgacctcagagtttggtggaaccctggattactgccacagt
gactggatcgtcctgagaacagccatagagagctttgcggtgacagttaaggacatagct
cagatgctgcaggcatttggcacaaagctggcagagacagagctgccagatgagggcacc
gccatcgtacacctcctctcaacccacactgataaatacaggaaactcaaggaggcgata
tggtctgtatcaaaggagggtcgccacctgctggctagcctggaggcctctgggagagag
gaggattcactatgggatatcaggctggactgggagactgtgcagaggctactagcccag
ctgagggacatggagtcagcctttgacggcttctttgagaagcatcatctgaagctccaa
cagtacctccagctgctcagatacgaacacagcttccaggagatggagttgtctctggag
cgtctggcgacccaggagagggaggtgtcgttgtcaggggagacgctgactcagacagaa
cagacactcagggacctggacagcctggaggctcacgcacaggaggagatggcccgtgcc
cagaccatcatcctccatggtcaccagctggcagcctgtcaccactacgccatggccctg
atcgtgcagcgctgcaacgagctacgtcaccgctgtgacacgctcagtaaggctctgagg
gccaaacacacacacctctcccagacctaccagctgatgctacgcttggatcaggcccag
agttggtgtgacgacggggcctacttgttggcccagcagctggtggaaaagttccagtct
aaggagggggcccaggctgctctgaaggacatagacagattcctggagggggctccgtct
ctcctcagctcaggacatgacctcctggccgtggagtttgagtctgtcctcaccccagag
atacaggtccagatagggaagacatttgagaagcacacagcggtgcaggagatgatccac
aacagacaggtctgtctgaggaagctggctgataaacacatccgtcccattcaactggtg
gccccccggccggagaacccaccccgttccaagtccccactattctcccccaaacatggg
gtcgacggtttgaagttctccttcgatctatcacttcctgggaagaggacgtcacggaaa
agccccggctccagaaagattgaggtgatgcatgactaccaggagaataggagctccctg
ctctccagcctggagggagaggacagcccagaccttctcaaacgtcacgtgatgagggag
ctaatcgagacagagagagtctatgtggaggagctgctgtcagtgctgctgggatacagg
ggagagatggagaatccaggcctttcagggctcctgccccccatcctgcaaagtaagaaa
gacatcctgtttggaaacatgcctgagatctacaacttccacagcagggtgttcctgcag
gacctggagggctgcctggagaccccagagggagtaggggcctgctttctggagcggaag
gagaatttccaggtgtatgagtgttactgtcagaataagtctcgctctgagtccttgtgg
aggcaattctccgactgtgcctttttccaggagtgtcagaagaagctggagcacaaactg
ggcctggattcttacctgctgaaaccagtacaacgccttaccaagtaccagctactactg
aaggagctactgaagtacagtccaggaggctgtgaggggacctcggagctacagggggcg
ctagcagccatgctggacctcctcaagtcagtcaatgattccatgcatcagatcgccatc
acgggctaccagggagagttgtctgacctgggccgggtgctgatgcagggctccttcagt
gtgtggatcagccataagaaaggccccacccgtatgaaggagctggcccgcttcaagccc
atgcagagacacctgttcctgtatgagagagccctgctcttctgcaagcgcagggaggag
catggagagggtgcagacaagaccccctcctacagcttcaagcactgtctcaagatgagt
gcggtggggattacagagaatgtcaagggagatgtgaaaaagtttgagatctggtacagt
ggcagggaggaggtgtacttagttcaggcccccacagtggaggttaagatggcttggctc
aatgatctgcgaaggatcctcaccaaccagcagaaacttcttaaaggttttggatgtcac
tcacatcactctccaaagcacacccaacaaagagttggtttaattcacctcagacatcct
ctctctggttctctttttctctcagatgagcattgtgtcaacaaccagatgccagaacac
attcaactgtctccgcccttgtctgagagcaaacagcagagggcgtcgatcagctccgag
gacactgagtcagggaggagcagtccagacccccagtcccactcccctcaacaccgacgc
aaccgacgcagctggcccggtgcacctcactcagtagacatctgtgagggtctggaggag
tggggtggaggtgaggacccctctcagccttcagacaccgaggaggaggacgctactcag
ctggctccaggcagatataaggccttggctgaatgttcacgatacggcccagatgacctc
accatcaagagcggtgatgtcatccagctgcagcacgaggacggcgaaggccactggctg
gtgaagaacctgagtcgcagacaggagggtatcatcccagtccccaacctgcacatgatt
ctgggaaacggcagtagaggacagtccaccagactaggaggtaagatccagggaaggcca
gaaagctcagctccccttagagggaaaatgctgtcttcaagtgctcgcgggacctgggaa
agtggttag
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