Oncorhynchus tshawytscha (Chinook salmon): 112256186
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Entry
112256186 CDS
T05605
Name
(RefSeq) transcription factor Sox-3-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112256186
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
112256186
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
112256186
NCBI-ProteinID:
XP_024285015
LinkDB
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Position
LG08:60656978..60658706
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AA seq
297 aa
AA seq
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MYNMMETEIKSPLPQSNSGSAAGNKNNSANDQDRVKRPMNAFMVWSRGQRRKMAQENPKM
HNSEISKRLGADWKLLTDAEKRPFIDEAKRLRAMHMKEHPDYKYRPRRKTKTLLKKDKYS
LPGGLLAPGANAVNNGVSVGQRMDSYAHMNGWTNSAYSLMQDQLAYPQHHSPQIQQMHRY
EMAGLQYPMMSSAQTYMNAASTYSMSPAYTQQTSSAMGLGSMASVCKTEPSSPPPAITSH
SQRACLGDLRDMISMYLPPGGDSADHPSLQTSRLHSVHPHYQTAGTGVNGTLPLTHI
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtataacatgatggaaaccgagatcaagagcccactcccgcagtccaattcgggttca
gcggcgggcaacaagaacaacagtgccaacgatcaggaccgggtgaagcggcctatgaat
gctttcatggtgtggtcccgtggacagcggagaaagatggcacaagagaaccctaaaatg
cacaactctgagattagcaagcggctcggtgcagactggaaacttttgaccgacgcggag
aagagacccttcatcgacgaggccaagcgtctgcgcgccatgcacatgaaggagcatccg
gattacaaataccgtccccgcaggaagaccaagaccctgctcaagaaagacaagtattct
ttgcctggaggacttctggcgccaggtgccaacgctgtcaacaacggcgtctcggtggga
cagcggatggacagttatgctcacatgaatggctggaccaacagtgcgtactccctcatg
caggaccagttggcctaccctcagcatcacagcccacagattcagcagatgcaccggtat
gagatggcagggctccagtaccccatgatgtcctcggcgcagacctacatgaacgcagca
tccacgtacagcatgtcccccgcatacacgcagcaaacctccagtgccatgggcttgggt
tccatggcctccgtgtgcaagaccgagccgagctcaccacctccggccattacttctcac
tcccagagagcgtgtttgggggacctgagggatatgatcagcatgtacctgcctcccggt
ggcgacagcgcggatcacccgtccctgcagaccagtcggttacacagtgtacatccgcac
tatcagaccgcggggactggcgtgaacggaacgctacccctaacccacatttga
DBGET
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