Oncorhynchus tshawytscha (Chinook salmon): 112256225
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Entry
112256225 CDS
T05605
Name
(RefSeq) histidine--tRNA ligase isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
112256225
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
otw01007
]
112256225
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112256225
Enzymes [BR:
otw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
112256225
Amino acid related enzymes [BR:
otw01007
]
Aminoacyl-tRNA synthetase
Class II (A)
112256225
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
112256225
Prokaryotic type
112256225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
tRNA-synt_2
WHEP-TRS
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
112256225
NCBI-ProteinID:
XP_024285082
UniProt:
A0A8C8FPR0
LinkDB
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Position
LG08:59641613..59646351
Genome browser
AA seq
523 aa
AA seq
DB search
MINLGMASLRLYAGLVGYPSGFCARSLRTLSGMTVSQIDEEVAKLLELKVQLGGDEGRHQ
FTLKTAKGTRDYNPKQMAIREKVFNTIISCFKRHGAENIDTPVFELKETLTGKYGEDSKL
IYDLKDQGGELLSLRYDLTVPFARYLAMNKVTNIKRYHIAKVYRRDNPAMTRGRYREFYQ
CDFDIAGQYDPMIPDAECLKIVHEILSELELGDFRIKVNDRRILDGMFAVCGVPDDKFRT
ICSTVDKLDKVSWEDVRSEMVKEKGLSEEAADQIGQYVSLQGGMDLAERLLQDAKMSQSK
QACAGLTDMKQLFSYLQLFQVTDKVVFDLSLARGLDYYTGVIYEAILTQTGPVPVAAAQN
GAGEKAEEGVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERVFSIMEQKAEASAE
KVRTTETQVMVASAQKNLLEERLRLTAELWNAGIKAEVMYKKNPKLLSQLQHCEDSGIPL
VAILGEQELKDGVVKLRTVHSREEIDVSRDKLVEEIKRRTSDV
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgattaacctgggtatggcgtccctgcgtctttatgcggggttggtgggctatccgtct
ggattttgtgcccgctctctacgcaccctctctgggatgactgtgtctcagattgatgag
gaagtggccaaactgctagagctgaaggttcagcttggaggagatgaaggcagacaccaa
ttcacgctcaagaccgcaaagggaaccagggactataaccctaagcagatggccatcaga
gagaaagtcttcaacaccatcatcagctgttttaaacgccacggagccgagaacatcgac
acacccgtctttgagctgaaggaaacgttgacaggaaagtatggtgaggattctaagctc
atctacgacctgaaggaccaaggaggagagctgctgtcccttagatacgatctcactgtg
cctttcgcccgttacctggccatgaacaaggtcaccaacatcaagcgctaccacattgcc
aaggtctatcgccgtgacaaccccgccatgacccgcggccgctacagggagttctatcag
tgtgattttgacattgcaggccagtacgaccccatgatcccagacgctgagtgcctgaag
atcgtccacgagatcctgagtgagctggagctgggagacttccgcatcaaggtgaacgac
agacgtattctcgatgggatgtttgcagtgtgtggagttccggatgacaagttccgcacc
atctgctccacagtggacaaactggacaaggtgtcttgggaggatgtgaggagtgaaatg
gtgaaggagaagggtctgtctgaggaagcagccgatcagatcggacagtatgtcagcttg
cagggggggatggacctagctgagcgcctgctgcaggatgctaagatgtcacagagcaag
caggcatgtgccggcctcacagacatgaagcagctcttcagctacctgcagctcttccag
gttacagacaaggtggtgtttgacctgagtctggcccgtgggttggactactacacaggt
gtgatttatgaggccattctgacccagaccggcccagtcccagtggcggcagcacagaac
ggggcgggcgagaaggctgaggaaggtgtgagcgtgggtagcgtggcgggcggtgggcgc
tacgacggcctggtgggcatgttcgaccccaagggcaggaaggtgccgtgtgtgggggtc
agcatcggcatcgagagggtcttctccatcatggagcagaaggctgaggcatcggcggag
aaggtgcgaaccacagagactcaagtcatggtggcctcggcacagaaaaatcttctggag
gagagactccgactgaccgctgaactgtggaacgctgggatcaaggcagaggtgatgtat
aagaagaaccccaagctgctgagccagctgcagcactgtgaggactctgggatccccctg
gtggcgatcctgggggagcaggagctcaaggacggggtggtgaagctccgaacggtccac
agccgagaggagattgacgtgtccagagataaactagtggaggagatcaagagaaggacc
tcggacgtctaa
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