Oncorhynchus tshawytscha (Chinook salmon): 112256246
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Entry
112256246 CDS
T05605
Name
(RefSeq) zinc finger CCHC domain-containing protein 7 isoform X1
KO
K12597
protein AIR1/2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
112256246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112256246
03016 Transfer RNA biogenesis [BR:
otw03016
]
112256246
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
112256246
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
112256246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
112256246
NCBI-ProteinID:
XP_024285113
UniProt:
A0A8C8G3V3
LinkDB
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Position
LG08:57843574..57849632
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AA seq
497 aa
AA seq
DB search
MMMGHQNDEEEGGNKDNRFYIEASSSSEGELGFSQYKQSSSPRAPQATGGNSPLVLAFPL
SSGRALRDVSPLDSSPSPNSRLSLHSEQDLVLEYDDEALEEWMILGAEEQEGDEDIQLNL
GYWSSSSESHSGTEDEELNAKYALKHNWAIIEKDKPRPYRYFTSDRNLTCHNCNKTGHLA
KGCTTPRRRPTCVLCGLQGHVQRACPGRHCHSCGLPSHGYQPCPEPPFWNQHCHRCGMAG
HLSDACPDTWRQFHFTTQQEVPLRPHVDHTHKHCRHNAHCYNCSRRGHLGHECTQRRMIS
GTFASLPYVCHYDNKQDIVKLNTRIHRKARELRVEGFMPLLEHQRTYVTPGGSSEEERPS
PAPGRRRSLEGRRKTWPERRRERREVKKLRREAQARRAVGMTKWGSDEVVYTRDHFKNPH
REPIPPPQKKRRREESRESKSEERSRKGRSKESSRKNREAERWKKRGGLKRGYLYPRDDL
GPMNDYLLSPKNRVRIL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgggccaccagaatgatgaggaagagggtggtaataaagacaacagattctac
atcgaggcctccagtagctcagaaggtgagctggggtttagtcagtacaaacagtccagc
tcaccgagagctccccaggccactggaggaaactctcccctagttctggccttccctctc
tcgtctggccgggctctacgggacgtgtcgccactggacagcagcccaagcccgaactcc
aggctaagcctccactcagagcaggacctggtgctggagtatgatgatgaagccctagag
gagtggatgatcctgggagcagaggagcaggagggagatgaggacatccagctcaacctg
gggtactggagcagcagctcagagtcacattctggaacagaggatgaagaactgaatgca
aaatatgctctcaaacacaactgggccataatagagaaggacaagccacgcccataccgc
tatttcacctctgaccggaatctcacctgtcacaactgcaacaagactggacacctggcc
aagggctgtaccaccccgaggaggcgacccacctgtgtgttgtgtgggctccagggccat
gtccagagggcctgtccaggccggcactgccacagctgtgggctcccctcacacgggtac
cagccctgccctgaaccccctttctggaaccagcactgccaccgctgtgggatggctggc
cacctatcagatgcttgtccggatacatggagacaattccacttcacaactcagcaggag
gttcccctcaggccacacgttgaccacacccacaaacactgcagacacaacgctcactgc
tacaactgctccaggagaggacacctcggccatgagtgtactcagaggaggatgatcagt
gggacgtttgcctcgctcccctacgtctgtcactacgacaacaagcaggacatcgtcaaa
ctgaacaccaggatacacagaaaagccagagagctaagggtggagggcttcatgcctctg
ttagagcaccagaggacctacgtgacaccagggggcagtagtgaagaggagcggccctcc
ccagcaccagggaggaggagaagcctggagggcaggaggaagacgtggccggagagacgc
agggagagacgggaggtgaagaagctgaggagagaggcccaagccaggagggcggttggg
atgaccaaatggggctcagacgaggttgtttacaccagggaccactttaagaacccccac
agagaacccatacctccccctcagaaaaagagacgccgtgaggaaagcagggagagcaag
agtgaggagaggagtaggaagggcagaagtaaagagagcagtaggaagaatagagaagca
gagaggtggaagaagagaggagggctgaagcgtgggtacctgtacccccgtgatgacttg
ggacccatgaatgattacctcctctcccccaaaaatagggtgcgaattttataa
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