Oncorhynchus tshawytscha (Chinook salmon): 112256251
Help
Entry
112256251 CDS
T05605
Name
(RefSeq) syntaxin-3 isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112256251
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112256251
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112256251
Membrane trafficking [BR:
otw04131
]
SNARE
Syntaxin (Qa)
Stx-PM
112256251
Exosome [BR:
otw04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
112256251
Exosomal proteins of other body fluids (saliva and urine)
112256251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
Syntaxin_2
Relaxase_C
ArAE_1_C
EspB_PE
AAA_13
DUF6115
YtxH
DUF6827
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
112256251
NCBI-ProteinID:
XP_024285120
LinkDB
All DBs
Position
LG08:57777594..57801639
Genome browser
AA seq
342 aa
AA seq
DB search
MKDRLEQLKATCDNDDEEVEIAIDNAAFMDDFFSQIDDIRISIDKIDENVSEVKKLYSVI
LSAPTSDQKTQDDLEAVTNNIKKMANNARNKLKTIERDLASEEEERISADMRIRKSQHAV
LSRKFVEVMTKYNEAQVDFRERSKGRIRRQLEITGKATTDEELEEMLEGGNSAVFTSGIM
DSGISKQALSEIEARHKDIVRLESSIKELHDMFVDIAMLVESQVHVSSSDPSIQSLIDSS
IHYFISAFLNPTVLLSLFLSRLRPRSLSVICFSFLFSSTLFPFSFRSAFFLSMLWDRSSL
FVCVYPSIHLSPSHHSFIFSRSLHSQSHLIQHLSSLQWSVNH
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgattggaacaacttaaagcaacatgtgacaatgacgatgaggaagtggaa
attgctattgacaatgcagcttttatggatgactttttctctcagattgacgacatcagg
atcagcattgataagattgatgagaatgtgtctgaagtcaagaagctctactcggtcatc
ctgtctgcccccacatcagaccagaaaacacaggatgacttggaggctgtcaccaacaac
atcaagaagatggctaacaacgcccggaacaaactcaaaaccatcgagagggatctggcg
tctgaggaagaggaaaggatttcagccgacatgcggatacgcaaatcacagcatgcagtg
ctgtccaggaagtttgtggaagtgatgaccaagtacaatgaggcccaggtggacttcagg
gagaggagtaaaggacgcatccggagacagctagagatcactggaaaagccacgacagat
gaggagctggaagagatgttagaggggggaaactctgctgtcttcacttcagggatcatg
gactctgggatctcgaagcaagctctcagtgagatcgaggcgcgacacaaagacattgtg
cgtctggagagcagcatcaaagagctgcatgacatgttcgtagacatcgccatgctggtg
gagagccaggtacacgtctcgtcctccgatccgtctattcagtcattaattgattcctcc
atccactatttcatatcagcatttttaaaccctactgtcctactgtctttgtttctgtct
cgtttgcgtcctcgttccctgtctgtcatctgtttttcctttctcttttccagtaccctc
ttccctttctccttccgcagtgcttttttcctctccatgctttgggacagaagttccctg
tttgtgtgtgtctatccatccatccatctgtctccctcccatcactcattcatcttcagt
aggagtctacattctcagtcacatttgattcaacatcttagtagcctacagtggtctgtg
aatcactaa
DBGET
integrated database retrieval system
