Oncorhynchus tshawytscha (Chinook salmon): 112256279
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Entry
112256279 CDS
T05605
Name
(RefSeq) elongator complex protein 1 isoform X1
KO
K11373
elongator complex protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112256279
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
112256279
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_WDR19_1st
Beta-prop_EML_2
Beta-prop_WDR35_TULP_N
Beta-prop_NUP159_NUP214
TPR_GEMI5
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
112256279
NCBI-ProteinID:
XP_024285192
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Position
LG08:complement(56890665..56901496)
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AA seq
1322 aa
AA seq
DB search
MRNLRLLKSLRCLKLQGPGTPQCFTVRTDTGTLLIASEYSVTELDTRAGQVVNEVSLTVE
RYLPEDGGGTVVGIQDLPDQESVCVATATGDVILYNLNTNQLECVGSVDSGLSAMSWSPD
QELVTLTTGQDTIIMMTKNFEPITEVGIHQDDFGEGKFITVGWGKKETQFHGSEGKHAAQ
RKTIEVQPAMSWDDRRPRVTWRGDGQLFAVSSVCPLTGARKVRVWNRECVLQSTSETVNG
LEQSLCWKPSGSLIAATQRHPNKHSVVFMEKNGLLHGDFTLPFGKERVKVKELLWNSDST
VLAVWLEDMTPGEGCQVNTYIQLWTVGNYHWYLKQNLYFGSDPQRAPAYVSWDPERPLRL
HLVTRGWVSLNYDWGWSTDHSHGEDGHDNANVAVIDGDKLLVSTFRQCVVPPPMCAYDLQ
LPAPVNLVTFQRQRTNELAALTADGHISVYGQGTEKLSEPAAGLGGFRSVTHAPHLKTTY
RVAVDQEEPLALRLLLWLREDVFLGVGACTDGPSQSKMLILGPSEAQGPQPTLEIRSHVE
VEGHVISMCHSSKTGTVALQLEDGQIRKFLWDSLKPSVVEWQDSTGCRINFPDPCVQTAL
FTIEEEHLLGLTDRSHLFVGETEVASNVSSFVVYDDFLLLTTHSHTCRCFRLTTLTVKGL
QVALAADGGQNQNDQNDETLRKIERGSRIVTVVPQDTRLILQMPRGNLETIRHRALVLAQ
LRKWLDSQRFREAFECMRKLRINLNLIYDHNPKVFLESVETFLRQLDSINHINLFLTELK
EEDTTTTMYPCPVNTTGQSAPAACGKKVDIVCDALRCTMESMDQHKYCLSILTSHVKKTV
PELEVALQKVHELRVNPPSAANAVSAEEALKYLLFLVNVNELYEHSLGTYDFDLVLMVAE
KSQKDPKEYLPFLNMLKTLEPNYQRYSIDKHLKRYRKALHHLSKCGEEHFTEALNLVKDQ
RLYSEALGLYPTDSPQYKALSCAYAEYLVEQQQAEQAGLLLWRCGEATRALQAFVGSASW
RNALCVAEQIPLPSDQLALLARDLAEKLIELRRYTEAALLLERYAKDCEEAISALITGAV
WEEALRLVYLYNRHDIIETNFKPALLEACSSQTSYLEAQKAMFTRHKTRLSVVRELKEKA
RLELLDEDVPDCPEAELYSEASSVMTGSHAGSKYSHSNSRISSRSSKNRRKAERKKLSLK
EGTPLEDMALLHALAEIIHSVDKMREEVHSLLKALVLFQFDGQAGRLQHAYGEALQMIEV
ALPEVWQEGLQQTQAPITGPNSTANSIMASFQQPRPSATQDSETPPTPKMRNGVKWKLSI
LK
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacttgaggttgctgaagagccttcgttgcttgaagctgcaaggcccgggcacg
ccgcaatgtttcactgttcggacggacacaggcaccttgctcatcgcttcagaatactcc
gtcacagagttggacacacgagctggccaggtggtgaatgaggtgtcgttgacagttgag
cgctatcttccagaggatggcggtgggacagttgttggtatccaagacttaccagaccag
gagtctgtgtgcgtggcaacagccactggtgatgtcattctctacaatctcaacactaac
cagctggagtgtgtgggcagtgtggacagtggtctgtcagccatgagctggagcccggac
caggagctggtcactctcaccactggtcaggacaccattatcatgatgaccaaaaacttt
gaacccatcacagaggttgggatccatcaggatgactttggagaggggaaatttatcaca
gtgggctgggggaagaaagagacacagttccatggctcagagggaaagcacgctgcccag
aggaagactatagaggtgcagccagccatgtcgtgggacgaccgcaggccgagggtgacg
tggagaggagacgggcagctcttcgctgtgagctcagtttgccccctgactggtgccagg
aaggtcagagtgtggaacagagagtgtgtcttgcagtcaacaagtgaaaccgtcaacggt
ctggagcagtcactgtgttggaaaccgtcaggtagtttgatagcggccacacagcgtcat
cctaacaagcacagtgtggtgtttatggagaagaacggcctcctacacggcgacttcacc
ctgccctttggcaaagaacgggtcaaggtgaaggagctgctatggaacagtgactcgact
gtgttggctgtgtggctggaggacatgacaccgggagaggggtgtcaagttaacacatac
attcagctgtggacagtaggtaactaccactggtacctgaagcagaacctgtacttcggc
agcgacccccagagggcaccagcctacgtgagctgggatcctgagaggcccctgcggctg
cacctggtgacccgaggctgggtcagcctgaactacgactggggctggagcaccgaccac
agccacggggaggacgggcatgacaacgccaacgtggccgtgatcgatggcgacaagctc
ctcgtgtcaacgtttcgtcagtgtgtggtgcccccgcccatgtgtgcctacgaccttcag
ctgcccgcccccgtcaacctggtgaccttccagcgccagaggaccaatgagctggcagcg
ctcacagccgacggacacatctctgtctacggccaaggtactgagaaactgagtgagcct
gcagccggattgggaggattccgatctgtcacacacgcccctcatctaaagacaacctac
agggttgcggtggatcaggaggaacccctggctctgcgtctgctgctgtggctgagagag
gatgtgttcctgggggtgggggcctgtacagacgggccgtcccagtccaagatgctcatc
ctgggaccctcagaggcccagggcccacagccaaccctggagatcaggtcacatgtggag
gttgaaggtcacgtgatcagcatgtgtcacagctccaagacgggcacggtggcgctgcag
ctggaggacggccagatcaggaagttcctctgggactctttgaaacctagtgtggtggag
tggcaggactcaacaggctgcagaattaacttcccagatccctgtgtgcagacggccctc
tttaccatagaagaggagcatctgttagggcttacggaccgatctcacctgtttgttggt
gagacagaggtggcctccaacgtttcctccttcgtggtctacgacgacttcctgctgctc
accacacactcgcacacttgccgctgcttccgactcaccacgctcactgtcaaagggctg
caggtggccttggctgccgacggaggtcagaatcagaatgaccagaatgacgagactctc
cgcaagatagagaggggctccagaatcgtcactgtggtcccccaggacaccaggctcatc
ctacagatgcctcgcggtaacctggagaccatccgccatcgagcactggtgttggctcag
ctccgaaagtggctggacagtcagaggttccgagaggcctttgagtgcatgaggaagctg
cggatcaacctcaacctgatctacgaccacaaccccaaggtgtttttagagagcgtggag
actttcctgagacagctggactctatcaatcacatcaacctgttcctcacagaactcaag
gaggaagataccactacaacaatgtacccttgtccagtgaacactacaggacagtcagcc
cctgcggcttgtgggaaaaaggtggatattgtctgtgatgcgttacgctgcaccatggaa
tctatggaccagcataagtactgtctgtctattttgacgtcacatgtgaagaagactgtt
cctgagctggaggttgccctgcagaaagtccacgagcttcgagtgaacccacccagtgct
gccaacgcagtgagtgcggaggaggctctgaagtacctcttgttcttggtcaatgtcaac
gagctgtatgaacactctctgggcacctacgactttgacttggtcctcatggtggccgag
aagtcccaaaaggaccccaaagagtaccttcccttcctgaacatgctgaagactctagag
cccaactaccagcgctattccatcgacaaacacctcaagagatacaggaaggccttgcat
cacctcagcaagtgtggtgaagagcacttcaccgaggccctgaatctggtgaaggaccag
aggctgtatagtgaagccctgggtctctacccaacagacagccctcagtacaaggcgctg
agctgtgcctacgccgagtacctggtagagcagcagcaggcggagcaggcagggttgttg
ctgtggcgctgcggcgaggcgacccgcgccctccaggcctttgtgggcagtgccagctgg
aggaacgccctctgtgtggcagagcagatccccctgccatccgaccagctggcattgctg
gccagggacctggcagagaaactgatagagctcagaagatatacggaggcggccttattg
ttggagcggtatgccaaggactgtgaggaggccatctcagctctgatcacaggtgcagtc
tgggaagaagcacttcgattggtgtatttgtacaacagacacgacataattgaaacaaac
ttcaaaccagctctcttggaagcatgtagttctcagacctcttacctggaagctcagaag
gcgatgttcactcgtcacaaaacccgtctgtccgtggtacgggagcttaaggaaaaagcc
aggctggagttactggatgaggatgtcccagactgtccggaggcagagctctactcagag
gccagtagtgtgatgacaggcagccatgctggctccaagtactcgcatagtaactcccgc
atctcctcgaggtcgtctaagaatcgccggaaggccgagcgcaagaagctgagtctgaag
gaagggacccccctagaggacatggccctgctgcatgccctggcagagatcatccactct
gtggacaagatgagagaagaggtgcacagcctgctgaaggccctggtgctgttccagttt
gacggacaggcggggaggttgcaacatgcctatggggaggctctccagatgatagaggtg
gcccttcccgaggtgtggcaggagggtcttcagcagacccaggcaccgatcacaggtcct
aactccacagccaatagcatcatggcttcatttcaacagccaagaccctcagcaacccaa
gattcagagaccccaccaaccccaaaaatgagaaatggtgtcaagtggaagctgagtatt
ctgaagtag
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