Oncorhynchus tshawytscha (Chinook salmon): 112256316
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Entry
112256316 CDS
T05605
Symbol
canx
Name
(RefSeq) calnexin isoform X1
KO
K08054
calnexin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04141
Protein processing in endoplasmic reticulum
otw04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112256316 (canx)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112256316 (canx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
otw03110
]
112256316 (canx)
04131 Membrane trafficking [BR:
otw04131
]
112256316 (canx)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
otw04091
]
112256316 (canx)
Chaperones and folding catalysts [BR:
otw03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
112256316 (canx)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
112256316 (canx)
Autophagy
ER-phagy
Other ER-phagy associated proteins
112256316 (canx)
Lectins [BR:
otw04091
]
L-type lectins
112256316 (canx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Spore_coat_CotO
PFF1_TM
Piezo_TM1-24
V_ATPase_I
DDHD
Motif
Other DBs
NCBI-GeneID:
112256316
NCBI-ProteinID:
XP_024285246
LinkDB
All DBs
Position
LG08:54784282..54806703
Genome browser
AA seq
616 aa
AA seq
DB search
MELKVRYVLLLAVGLLSTLLLTTVTAHQEEEEDEPIMEMGGDMDVEDEMEELDHGEELLD
GEVEADMPPGPPPVPKVTYKAPEPTGEHFFAESFDMGTLDSWVLSKAKKEDIDEDIAKYD
GKWEVEDMKDGKLPGDKGLVLKSRAKHHAISAQLLRPFIFDTKPLIVQYEVNFQQGIDCG
GAYVKLLSQTPDLNLDEFVDKTPYTIMFGPDKCGEDYKLHFIFRHKNPKTGEYEEKHAKK
PDSDLRTYYTDKKTHLYTLVVNPDNSFEVLVDQAVVNSGNLLTDMTPPINPAAEIEDPDD
HKPEDWDERPKIQDPDAVKPEDWDEDAPKQIPDEDAVKPDGWLDDESEYTSDPDAVKPED
WDEDMDGEWEAPQVPNALCETAPGCGAWQRPMIDNPSYKGKWKAPMIDNPNYQGVWKPRK
IANPAFFEDLHPFRMTPFNAVGLELWSMSSDIFFDNFFITNERHTADHWANDGWGLKKAA
EGAAEPGLVNQMMTAADERPWLWVVYVLTVAVPLVLIIVFCCTGKKTAAAAADYKKTDEP
QPDVKEEEVVEKAEADQVKEEKSQPAAAEKNSDAEDSPAEEVNEEEEEEEEEEEFTEEKQ
EDDLRRSPRNRKLRKD
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggagctgaaggtgaggtatgttctgctgctggccgtgggcctgttgtcaacactgcta
ctgaccacggtgaccgcccaccaggaggaggaggaggacgagcctatcatggagatgggg
ggtgacatggatgtggaagacgagatggaggagcttgaccatggggaggagcttctggat
ggggaggtggaggcagacatgcccccgggaccaccaccagtccctaaagtgacctacaaa
gctcccgagcccacgggggaacactttttcgccgagtcctttgacatggggacccttgac
agctgggtcctgtcaaaggccaagaaggaggacattgatgaggatatcgccaagtatgac
ggtaaatgggaggtggaggacatgaaggacggcaagctgcccggcgacaagggcctggtc
ctcaagtcccgtgccaaacatcacgccatctcagcccagctcctcaggcccttcatcttc
gacaccaagcccctcatcgtccagtatgaggtcaacttccagcaagggatcgactgcggc
ggcgcctacgtcaaactgctctcccagacacccgaccttaacctggatgagtttgttgac
aagactccctacaccatcatgtttggaccagacaagtgcggcgaggactacaagctgcac
ttcatcttccgccacaagaaccccaagactggcgagtacgaggagaagcacgccaagaag
cctgactcagacctgcgcacctactacaccgacaagaagacccacctttacactctggtg
gtgaacccagacaacagctttgaggtgctggtggaccaggcggtggtgaacagtggtaac
ctgctgacagacatgaccccccccatcaacccggctgccgagatcgaggaccccgacgac
cacaagccagaggactgggatgagagacccaagatccaggaccctgacgcagtcaaaccc
gaggactgggatgaggatgcaccgaaacagatcccagatgaggacgcagtgaagccagac
ggctggctggatgatgagtccgagtataccagcgaccccgacgcagtcaagcccgaggac
tgggatgaggatatggatggtgagtgggaggcccctcaggtccctaacgccctctgtgaa
accgcccccggctgtggcgcctggcaacggcctatgattgacaaccccagctacaagggc
aagtggaaggcccccatgatcgacaatcccaactaccagggtgtgtggaagcccaggaag
atcgccaacccagccttcttcgaggacctccatcccttcagaatgacccccttcaacgcc
gtgggcctggagctgtggtccatgtccagcgacatcttctttgataacttcttcatcacc
aacgagaggcacacggccgatcactgggccaatgatggttggggcctgaagaaggctgcc
gagggagccgctgagcccggtctggtgaaccagatgatgaccgcagcagacgagcgtccc
tggttgtgggtggtctacgtgcttaccgtggccgtgcctctagtcctgatcatcgtcttc
tgctgcactggaaagaagactgctgcagctgcagccgactacaagaagacagacgaaccc
cagccagacgtgaaggaggaggaagtggtggagaaggctgaagcagaccaagtcaaggag
gagaagagccagccagctgcagcagagaagaatagtgatgcagaagacagtcctgcagag
gaagtaaatgaggaggaagaggaggaggaggaggaagaagagttcactgaagagaaacaa
gaagatgacctcagaaggtcccccagaaacaggaaattgagaaaggactga
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