Oncorhynchus tshawytscha (Chinook salmon): 112256320
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Entry
112256320 CDS
T05605
Name
(RefSeq) TBC1 domain family member 9B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112256320
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112256320
Endosome - Golgi transport
Rab GTPases and associated proteins
112256320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
112256320
NCBI-ProteinID:
XP_024285252
UniProt:
A0A8C8JIJ1
LinkDB
All DBs
Position
LG08:54526675..54549853
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AA seq
1231 aa
AA seq
DB search
MWITPEEVLLANALWVSERANPFFILQRRKGHGKGGGITGLLVGTMDVVLDSSARVAPYR
ILHQTGDSQIFWSIACGSSRKEITGHWEWLETNLLQTLSIFDNDEDITTFVKGKVSGIIA
EENKSKAAQEDEDSGKFREAEQKMRKLFGMPGEEKLVNYYSCSYWKGRVPRQGWVYLSVN
HLCFYSFLLGKEVTLVVQWTEVTRLEKNATLVFPESVRVSTRHTEHYFSMFLNINDTFKL
MEQLATIAMRQLLDNEGFSADRTLPKACKTLKNVSALKRDLDARAKNERYRALFRLTPDE
RLDGHTDCTLWTPFAKMHIVGQLFVSNNYICFCSREEDLCQLIIPLREVSIVEKADSSSV
LPCPVSISTKNKMTFLFANLKDRDFLVQRISDFLQRTPDKLWSDGHPLALSGYSVSPSPS
TTPLSSSLPTPAGAGGEPSQGRHYSPSLPTATQGLLRIYQKDDPEDHGPKATKEKMKEES
WNIHFFEFGRGVCMYRTSKTRELVLNGIPESLRGELWLLFSGAQNEMATHPGYYAELVEQ
AMGRCTLATEEIERDLHRSMPEHHAFQNEMGIAALRRVLTAYACRNPGIGYCQAMNIVTS
VLLLYCTEEEAFWLLVALCERMLPDYYNTRVVGALVDQGVFEELTRECLPLLYEHMQELG
VISTISLSWFLTLFLSVMPFDSAVLLVDCFFYEGIKVIFQVALAVLHANMDTLLGCTDEG
EAMTILGRYLDNVVNKQTVSPPIPHLHALLTSGDEPPPEIDVFQLIKSSYDKFGSLRADV
IEQMRFKQRLKVIQSLEDTAKRSVVRAIMTDSAFSIEELEELYVLFKAKHIMSCYWGASC
TAAERHDPSLPYLEQYRIDLEQFCQLFGALGTWLCGTHTVTLAARHFRLLDSNKDGLINF
KEFVTGLSGMYHGDMTEKLKLLYKLHLPPALCPEEAESALEAAQFFTDDDSPQESPFLSD
LDFLVQEVTSGEEMKEAGEASGCGDAEEKKEVKDYKYYLRMWAKEKEPKIETIKDLPRMN
QEQFIELCKTLYNMFSEDPLEQELYHAIATVASLLLRIGEVGKKFTNNGAKKSTDTTYTQ
APTLSAELPQPEKEESNGESSSGQSLVCKALAEAQLETPPQQTSDEEVKDDTSVSSYSMV
STGSLQCEDIADDTVLIGCAGDQQRRGSTLDGDWSITFEQVLASMLTEPPLVDYFEKKGD
IQARMATCKMQRGVERQVSSSSDHELAQLST
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgtggataactccagaggaggtgttgctggccaacgctctgtgggtgagcgaaagggcg
aacccctttttcattctccagcggagaaagggccatggcaaaggagggggcatcactgga
ttgttggtgggcaccatggatgtggtcctggactccagtgccagagtggctccctatagg
atcctgcaccagacaggggactcccagatcttctggagcatcgcttgtggctcctcccgg
aaggagatcacggggcattgggagtggctggagaccaacctgctccagacgctctccatc
tttgacaacgacgaagacatcaccaccttcgtcaaggggaaggtctcgggcatcatcgcc
gaggagaacaagagcaaagcggctcaggaggacgaggactcgggcaagttccgcgaggcc
gagcagaagatgcggaagctgtttggcatgcccggcgaggagaagctggtcaactactac
tcctgtagctactggaagggccgtgtgccccgccagggctgggtctatctcagcgtcaac
cacctctgcttctactccttcctcctggggaaagaagtgaccctggtggtgcagtggacg
gaagtgacacgtcttgagaagaacgccacgctggtgtttccggagagtgtgcgggtgagc
acacggcacacggaacactacttctccatgttcctcaacataaacgacaccttcaagctc
atggagcagctggccaccattgccatgcgccagcttctggacaacgagggcttctccgcc
gaccgtaccctgcccaaggcatgcaagacgctcaagaacgtctcggcactcaagagggac
ctggacgcacgggccaagaacgaacgctaccgggcgctgttccgcctgaccccggacgag
cgcctggacggacacacagactgcacgctgtggacgcccttcgccaagatgcacattgtg
ggccagctgtttgtctccaacaactacatctgcttctgcagccgtgaggaggacctctgt
cagctcatcatccccctcagagaggtgtccattgtggagaaggcagacagcagcagcgtc
ttgccctgccccgtgtccatcagcaccaagaacaagatgaccttcctcttcgccaacctc
aaagaccgcgacttcctggtccagcgcatctccgacttcctgcagcgcacacctgacaag
ctgtggagcgacggccacccgctggccctcagtggctattcagtttctcccagccccagt
accaccccactttcctccagcctccccacacccgcgggcgcagggggggaaccgtcccag
gggcgccattacagccccagcctgccaacagccacacagggcctgctccgcatctaccag
aaggacgacccagaggaccacgggcccaaagctaccaaggagaaaatgaaagaggagtcg
tggaacatccacttctttgagtttggcaggggggtgtgtatgtaccgtacctccaagacc
agagagctggtgctcaacggtatccctgagagcctccgaggggagctgtggctgctcttc
tcaggagctcagaatgagatggccacccaccctggctactatgctgagctggtggagcag
gccatgggccgctgtaccctggccacggaggagatcgagagggacctgcaccgctccatg
cccgagcaccacgccttccagaatgagatgggcatcgctgccctccgcagggtcctcacc
gcctacgcctgccgcaaccctggcataggatactgccaggcgatgaacattgtgacgtcg
gtgctgctgctgtactgtacagaggaggaggccttctggctgttggtggctctgtgtgag
aggatgctgccagactactacaacaccagggttgtgggtgctctcgttgaccaaggtgtg
tttgaggagctgactcgtgagtgcctccccctcctctacgagcacatgcaggagctgggt
gtcatctccactatctccctctcctggttcctcacgctgtttctcagcgtcatgcccttt
gacagcgccgtgctcctggtcgactgcttcttctacgagggcatcaaggtcatcttccag
gtggcactggccgtgctgcacgccaacatggacacgctgctgggctgcaccgacgaggga
gaggccatgaccatactcggacggtacctggacaatgttgtcaacaagcagactgtgtct
cctcccattccccacctccacgccctgttgaccagtggtgatgaaccaccacctgagatt
gacgtgttccagctcatcaagtcatcctatgacaagtttggaagtctgcgtgctgatgtc
atcgagcagatgaggttcaagcagaggttaaaggttatccaatcgctggaagacactgcc
aagaggagtgtggtgagggccatcatgaccgattcagcctttagcatcgaggagctagaa
gaactctatgttctcttcaaggccaagcacattatgagctgctactggggggccagctgc
acggcggcggagcgccatgaccccagcctgccctacctggagcagtaccgcatcgacctg
gaacagttctgccagctgttcggggccctgggcacctggctgtgtggcactcacaccgtc
acactggccgctcgccacttccgcctgttggacagcaacaaggacggcctcatcaacttc
aaagagtttgtcacgggcctgagtgggatgtaccatggagacatgacagagaaactgaag
ttactgtacaaacttcacctgccaccagcattgtgtccagaggaggctgagtcggcacta
gaggctgcgcagttcttcactgacgatgacagtccacaggaatctcccttcctgtctgat
ctggacttcctggtgcaggaagtgacctcaggagaggagatgaaagaggctggggaagcg
tcgggatgcggagatgcagaggagaagaaagaggtgaaggactataagtattacctgagg
atgtgggccaaggagaaggagcccaagattgagaccattaaagatcttcccaggatgaac
caggagcagttcatagagctgtgtaaaaccctgtacaacatgttcagcgaggacccactg
gagcaggagctctaccacgccatagccactgtggccagcctgctgctgcgcatcggagag
gtgggcaagaagttcaccaacaacggtgccaagaaatcaaccgacaccacctacacccag
gctcccaccctttccgctgaattgccccagcccgaaaaagaagagtcgaatggggaaagc
agctcaggacagtccctggtctgcaaggctttggcggaggcccagctagaaacgccgccc
cagcagacgtcggacgaagaagtgaaggatgacacgtcggtctcgtcctactccatggtg
agcacgggttcgctgcagtgcgaggacatcgccgatgacacggtcctaattggctgcgcc
ggcgaccagcagcggcgaggcagcacgctggacggcgattggtccatcaccttcgagcag
gtgctggcgtcgatgctcaccgagccgcccctggtggactactttgagaagaagggagac
attcaggcaaggatggcaacctgtaagatgcaaagaggggtggagaggcaggtgagctcg
tcaagcgaccatgagttggcccagctctcgacctga
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