Oncorhynchus tshawytscha (Chinook salmon): 112256321
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Entry
112256321 CDS
T05605
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130 isoform X1
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112256321
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112256321
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112256321
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
112256321
NCBI-ProteinID:
XP_024285254
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All DBs
Position
LG08:54438007..54512003
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AA seq
437 aa
AA seq
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MPKRWTAATPCSYLPVVLLVIVLPRCILSIRADKTISKEDHVTATVNATVLDSKGNPKQI
LTKDDGTYGQNSPKVDAKGIVIGPAPNHGVVDRQGCDPHTRFVVPPRTGHWVALLQRGNC
TFKEKILKASAFNASAVLIYNNNSNEDTVKMGHEGTGDTVAVMITESYGKEILGLLERNL
TVLVSVVVGQRGQAKNINRGSLVFVSISFIVLMIISSAWLIFYFIQKIRFTNARDRSQVG
HRRRLGDAAKKAIGKLTTRTVKKGDKETDPDFNHCAVCIEGYQLNDVVRILPCKHVFHKL
CVDPWLNEHCTCPMCKLNILKALGIMPNLPCVDNAGFDMDHRIGRSQTMASQRTALVDLS
SETSISLEPLHRGPLGTGPQIPSESGELTPRTGEINIAVTKEWFIIASFGLLSALTLFYM
IIKATASFSSPDLEWEE
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagaggtggaccgcagcaacgccatgcagctatctccctgtcgtcttgttggtg
atcgttctgcccaggtgtatactgtcgatccgtgctgacaaaaccatcagcaaggaagac
catgttactgctacggtcaatgccaccgtacttgactccaaaggcaatccaaagcaaatt
ctaaccaaggacgatggcacctacggccagaattcaccgaaagtggacgcgaaaggaatc
gtgattggacctgcaccgaatcatggagtggtggaccgccagggctgcgacccccacact
cgcttcgtggtgcccccccggacagggcactgggtggccctgctgcagcgcggcaactgc
accttcaaagagaagatcctcaaggcctccgctttcaacgcctccgccgtactcatctac
aacaacaactccaatgaggacaccgtcaagatgggccatgaaggtacgggtgacactgtg
gcggtgatgatcactgagtcgtacggcaaggagatcctgggtctgctggagaggaacctg
acggtgctggtgagtgtggtggtgggccagcgtggccaggccaagaatatcaaccgcggc
tccctggtcttcgtctccatctccttcatcgtactcatgatcatctcttctgcctggctc
atcttctacttcatccagaagatacgctttacgaacgcacgtgaccgcagccaggtagga
catagacgtcgacttggagatgcagctaagaaagccatcgggaagctgacaaccaggacg
gtgaagaaaggggacaaggagacagacccggacttcaaccactgcgctgtgtgcatcgag
ggttaccagctcaacgacgtggtccgcatcctgccctgcaaacatgtcttccataagctg
tgtgtggacccctggctgaacgagcactgtacctgccccatgtgtaagctgaacatcctc
aaggctctgggcatcatgcccaacctgccgtgcgtggacaatgccggttttgacatggac
cacaggatagggcgcagccagacaatggccagccagcggacggccttggtggacctgtcc
agtgagacgtccatcagcctggagcctctgcaccgaggccccctcggtaccggaccccag
atcccctccgagagcggagaactcaccccccgcaccggagagatcaacatcgccgtcacc
aaggagtggtttataatcgccagcttcggccttctcagcgctctcacattgttctatatg
atcatcaaggccactgccagcttctccagccctgacctggagtgggaggagtaa
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