Oncorhynchus tshawytscha (Chinook salmon): 112256324
Help
Entry
112256324 CDS
T05605
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112256324
Membrane trafficking [BR:
otw04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
112256324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
Ig_2
ig
LRR_EndoS
LRRNT
V-set
LRR_9
LRR_Zer-1
Ig_6
Receptor_2B4
Big_6
Motif
Other DBs
NCBI-GeneID:
112256324
NCBI-ProteinID:
XP_024285259
UniProt:
A0A8C8JR18
LinkDB
All DBs
Position
LG08:53778826..54162509
Genome browser
AA seq
614 aa
AA seq
DB search
MADCMSKVMLHTALSCWQPFLGLALVAVFMGSALGCPARCDCSAQSKSVLCHRKRLPSIP
DGIPIETRILDLSKNKLQAVNPDDFAPYPGLEDLDLSGNVISYVEPGAFNPLYSMHSLSL
KSNRIKLIPMGVFTGLSNLTRLDVSDNNIVILLDYMFQDLNNLKFLEVGDNDLVYISHRA
FSGLLSLETLTLERCNLTVVPTEALSHLHNLVRLHMRYLSISTLHAYSFKKLFRLRHLEI
DSWTSLDSVPANTLHGLNLTTLFITNTNLSSFPYQAIKHLHYLTLLNLSFNRIRHIEGRM
LSELVHLRELHLVGAQLSTVELYAFQGLRWLKVFNVSHNRLDTLEKGVFQAPEALEVLLI
DDNPLVCDCRLMWILQRRQSIYFGDSQPECSTPEGIRGRPFREFKETLLSYYVTCTKPKI
RENKTQTIAVDEGQPVRLYCSVEGTPRPVVSWLSPRRRLLTNKSHGRVMVHNNGTLEIKA
AEVQDGGVYLCMATNTAGNDSLMTSLAVKSLGSLYANRTQYYTDPSNATTNGTVNVTYGL
DLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDIEYVPRSKSNGTSLDGGA
EGEAGPRRFNMKMI
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggccgactgtatgagtaaagtcatgctgcacacggccctctcatgctggcaaccgttc
ctgggactggcacttgtggccgtcttcatgggttccgccttgggatgtcccgcccgctgc
gactgctcggcccagagcaagtcggttctgtgccaccgcaaacgcctacctagcatccca
gacggtatccccatcgagaccaggatcctggacctgagcaagaacaagctgcaggccgtc
aacccggatgactttgccccctatcctggtctagaggatttggacctcagtgggaacgtt
atcagctatgtggagccgggggccttcaaccctctgtacagcatgcactcccttagtctc
aaaagcaatcgtattaagctcattcctatgggtgtcttcacaggcctgtccaacctcacc
cggttggatgtcagcgacaacaatattgtcatcctgctggactacatgttccaggacttg
aacaatctgaagttcctggaggtgggtgacaatgacctagtgtacatctcccaccgggcg
ttcagtggactgctgagcctagagactctaaccctggagagatgcaatctgacagtggtg
cctactgaggccctgtcccacctgcacaacctggtaagacttcacatgcgatacctcagc
atcagcaccttgcatgcctactccttcaagaagttgttccgattgcgccacctggagatt
gacagctggacctcgctggacagtgtgccggccaacacgctgcacggcctcaatttgacc
acgcttttcatcaccaacaccaacctgtcctccttcccataccaggcaatcaagcacctg
cactacctgacgctcctcaacctgtccttcaaccgcatcagacacatcgaaggcaggatg
ctgtcggagttagtgcacctaagggaactgcatctggtcggggctcagttgtcgaccgtt
gaactgtacgcatttcagggcctccggtggctcaaggttttcaacgtctcccacaaccgt
ttggacaccctggagaagggtgtcttccaagctcctgaggctctggaggtactcttgatc
gatgacaaccccctggtttgtgactgccgcctcatgtggatcctgcagaggaggcagtcc
atctactttggtgactcgcagccggagtgcagtacccccgagggcatccgcggcaggcct
ttcagggagttcaaggagaccctgctctcctactatgtgacatgcaccaagcccaaaata
cgggagaacaagacgcaaacaattgccgtagacgaaggtcagccagtgagactgtactgc
agtgttgaggggacccccaggccggtggtgtcgtggctgtccccacgccggcgcctcctc
accaacaagagccacggtagagtcatggtccacaacaatgggacgctggagatcaaggcg
gccgaggtgcaggacggcggggtgtacctttgcatggcaaccaacactgcgggtaacgac
tcattaatgacctccctagcagtgaaaagcctggggtcgctctacgcaaacaggacccag
tactacacagatcccagcaatgccactaccaatgggactgtcaacgtgacctacggcttg
gacctaaagactatcttagtgtcgacagcaatgggttgtttcacattcctgggggtggtt
ttgttctgcttcctcctcctgttcgtttggagtcgggggaaagggaagcataaaaacaac
atagatattgaatacgtacctcggtccaagtctaatggcacctctttagatggtggagca
gagggggaagctggaccccgtcgctttaacatgaaaatgatctaa
DBGET
integrated database retrieval system
