Oncorhynchus tshawytscha (Chinook salmon): 112256333
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Entry
112256333 CDS
T05605
Name
(RefSeq) teneurin-3-like isoform X2
KO
K24473
teneurin
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112256333
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
EGF-like domain-containing proteins
Other EGF-like domain-containing proteins
112256333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TEN_YD-shell
TEN_NHL
Ten_N
EGF_TEN
EGF_Teneurin
GBD_Tenm3
Teneurin_ABD
FN-plug_TEN1-4
TTR_TEN1-4
Tox-GHH
RHS_repeat
EGF_2
NHL
EGF
EGF_Tenascin
CarboxypepD_reg
RHS
Motif
Other DBs
NCBI-GeneID:
112256333
NCBI-ProteinID:
XP_024285273
LinkDB
All DBs
Position
LG08:complement(52534078..52719810)
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AA seq
2726 aa
AA seq
DB search
MEQVKEQRPFCSLSKSQRDRERNHERERDLELRYTASSTDREGACRVPTQKSYSSSETLQ
AYDHDPARLLFSGRVKEKAYQETSDYGRPGQGFSLRQLGICEPSTRRGLALCPETGLSHP
LGRYSKRTVPTENHEPTSPERTMALWGRGAKSGQSSCLSSRSNSALTITDTEIDNKSDNE
IGDQLSSQQGQPPLPPAPPTHHKQHPSITSLSRGSLANQRSLSPPPSAGLVAELQSTAEC
VQLQDSWVLDSNVALESRHFLFKTGTETTPFFSTATPGYTMATGAAYSTPARPLPRNTLS
GGAFKFKKSPKHCSWRCTALSAVGVAVLLSIILCYCIAMHFFGLNWQLQETENQPAFENG
EVKALPTQPSILTVLSDDYGRNGAAHQENSSVDTGQVEVGRRVGQGIPPGVFWRSRLAME
QPRFLKFNISVQKNALVGVYGRKGIPPSHTQYDFVELLDGSRLIAKEMRDSTEPEARGQM
EHQISLHQAGFIQYLDSGVWHLAFYNDGKSPETVSYNTIILESVMECSHNCYGNGECVSG
SCHCFPRFSGPYCSRAACPILCSGNGQYTRGRCQCYSGWKGTECDVPATQCVDPQCGGHG
ICVMGNCVCNAGHKGSHCHQVDCLDPTCSGHGACHHGECHCNPGWGGMDCAILRSTCPEQ
CSSHGTFHTETGTCICEANWTGSDCSVEMCTVDCGPHGACVSGTCHCEEGSAGSECDQRD
CHPRCTDHGVCREGKCDCHQGWTGEHCTIALDSRVSGAVKIGYKDGCPGLCNSNGRCILD
QAGWRCICQSGWRGLGCDVATETFCSDGKDNERDGLVDCMDPDCCSQSSCQGQPYCRGSP
DPTSIVSQGQGSSSTQSAPRGFYERISFLVGHGGSHVIPGDNPFNSSLASIIRGQVLTGD
GTPLIGVNVSFRDYPEYGYTVTRQDGMFDLLANGGASLTLSLKRDPFPTLHRTVWLPWKV
FHVMDTVMMKRENNNIPSCHLIGLLRPSPLILASPLSTFYRSSPKDSPIIPETQVLHEDV
AIPGSDLNLVYLSSRTSGYKPILKVLMTQERLPFGLMKVHLKVAVMGRLFQKSLPAFPDL
SYTFVWDKTDAYNQKVYGLSEAIVSVGYEYESCLDVILWEKRTAILQGYELDASNMGGWM
LDKHHVLDIQNGILYKGSGENQFISLQPPVISTVMGNGRRRSISCPSCNGQALGNKLLAP
LALAWGIDGSLYVGDFNYIRRVYPSGNVTSVMELSNNPAHRYYLATDPVTGQLYVSDTYS
RRIYRPKVLTGIKELQSNAEVVAGTGEHCLPFDETHCGDGAKATDALLTGPKGIAVDKNG
LIYFVDGTTIRRVDQHGIISTLLGSNDLTSARPLTCDISMEINQVLLEWPTDLAVSPMDN
SLYILDNNVILRITENGQVSIAAGRPIHCPLAGMDRGAAGGQRAALTPLESAVAIAVSYY
GAIFVAETDERKLSRIRMISIDGEITHLAGSPSDCDCKNDVNCDCYQTGEGYAKDARLNV
PSSLVVAPDGTLYVADLGNIRIRAVGRNGPVLTSNTNNFEVASPDAQEVYVFDANGTHQH
TTSLLTGDFKYTFSYSIENDVTAVTDSNGNTLRIRRDPNRMPVRIVAPDNQVIWLIMGTN
GGLKTLTAQGQELVLLTYHGNTGLLATKTSEIGWTTFYEYDSEGRIMNVTFPTGTVKTLY
TEIYKALTVDIESSLTEEEMSITTNTSTIRAFYTLAQDQCRSSYQVGYDNSLRITYANGM
DTHYQTEPHILAGTANPTVARRNMSLPGESGQNLVEWRFRKEQARGKVIVFGRKLRVNGR
NILSVDYDRTLRTEKIYDDHRKFLLKIIYDATGHPVLWVPSSKMLPVNVSLSSNGQINAL
QRGPTTERLEYDSQGRLVSRVFADGKRWSYTYLDKSMVLLLHSQRQYIFDFDSQDRLSAV
TMPSVARYTMQTVRSVGYYRNLFHPPDSNASVAVDYSEDGLLQRVAHLGTGRQVLYKYRR
QNKLAEVLYDITRVSFTYDEMAGVLKTVNLQNEGFICSIRYRQLGPLVDRQIFRFSEDGM
VNARFDYTYDSSLRITSVQGVINETPLPIDLYQFDDISGKVEQFGKFGVIYYDINQIIST
AVMTYTKHFDTHGRIKEIQYEIFRSLMYWITFQYDDAGRCTKREIKIGPFANTTKYGYEY
DVDGQLQTVYLNDKVMWRYTYDLNGNLHLLNPGNGARLLPLRYDLRDRITRLGDVQYRMD
EDGFLRQRGSEIFEYNSKGLLARVYSKSNSWIIQYRYDGLGRRVSTKASLGQHLQYFYAD
LSYPSRITHVYNHSSSEITSMYYDLQGHLFAQEISSGEEYYIACDNTGTPLAVFTSNGLL
IKQVQYTAYGEIYFDSNPDFQLVLGFHGGLYDPLTKLLHFGERDYDIMPGRWTVPDISTW
KRVGKEPGPFNLYMFRNNNPISKVHEVREYVADVNSWLVTFGFHLHNTIPGFPVPKFDLT
HPSYELKKSQLWDDLPSISGVQQEVTRQAHALLSFERLPEVHAGRGRRGEKPWFWFSAAQ
SPIGRAVMFAIYKGTAHTHTLNVANEDCIKVATVLNNAFYLENLHFTVEGRDTHYFVKPG
LPDGDLAALRLTSGHKTLENGVNISVSQSTTVMDSRTRRFADVELGCGPLALHVRYGSTV
DEEKARVLELARQRALVSAWANEQQRVSDGEEGVRPWTEGEKRQLLSSGKVQGYDGYYVL
SIELYPELADSAKNIQLLRQSEIGKR
NT seq
8181 nt
NT seq
+upstream
nt +downstream
nt
atggaacaggtgaaggagcagcggcccttctgctcgctctccaagagccagagagaccgg
gagagaaaccacgaaagggagcgggatctggagctgcgttacaccgcatcatcgacagac
agagaaggggcttgccgggtgcctacacagaagtcctacagctctagcgagacgctgcag
gcctacgaccatgaccccgcccggctgctattctcaggccgagtcaaggagaaggcctat
caggagaccagtgactacggcaggcctggacagggcttctcgctgaggcaacttgggata
tgtgagccttccacacgcagaggcctggccctctgccctgaaacgggcctctcacacccc
cttggtcgctactccaaaagaactgtccccacagaaaatcatgagcccacatccccggaa
cgtaccatggctctctggggaaggggtgccaagtcaggccaaagctcgtgcctgtctagt
cgctccaactcagcccttaccatcacagacacggaaattgacaataagtcggacaacgaa
atcggagaccaactgtccagtcaacaaggccagcctcctctaccaccagctccgcccact
caccacaaacagcacccgtcgattacatcgttgagccgcggctcgctggccaatcaacgg
agcctgagcccgcctccctcggctggcctggtggctgagttgcagagcacagctgaatgt
gtccagctacaggacagctgggtcctggacagcaatgtggccctggagagcagacacttc
ctctttaaaacgggcacagaaacaacccctttctttagcacagcaaccccaggttacacc
atggcaacaggggcagcgtactccacaccggcacgtcccctacccagaaacaccctctct
ggaggggctttcaagtttaaaaaatcccccaagcactgttcctggaggtgcaccgccctg
agtgcagtgggcgtggctgtcctgctgtcaatcatcctctgctattgtatagcaatgcac
tttttcggcctcaactggcaacttcaagaaacagaaaaccaacccgcatttgagaacgga
gaggtgaaggctttgcccactcaaccgagcatactgacagtactctcagatgactatggc
aggaatggtgcggcccatcaggaaaacagctccgttgacaccgggcaagtggaggtgggc
aggagggtcggtcagggaataccgccaggagtgttctggcgctctcggctggctatggaa
cagccgcgcttcctcaagttcaacatctctgttcagaagaacgcactggttggggtctat
gggaggaagggtatcccaccatctcacacacagtatgactttgtggagctgctggatggc
agcagactcattgccaaagagatgcgggattccacggagccggaagccaggggccagatg
gagcaccagatcagccttcaccaagctggcttcatccagtacctggactctggggtgtgg
catctggccttctacaatgatgggaagagcccggagacagtatcatacaacaccatcatc
ctagagtcagttatggagtgctcacacaactgttatggaaacggtgaatgtgtgtcgggc
tcatgtcactgtttcccaaggttcagtggaccatactgctcaagagctgcctgtcccatc
ctatgcagtggcaacggccagtacacaagggggcgctgtcaatgctacagtggatggaag
ggcacagagtgtgatgtgcctgctactcagtgtgtggacccccaatgtggcggtcatggg
atctgtgtgatgggtaactgtgtgtgcaatgccggccacaagggaagccactgtcaccaa
gtggactgtctggacccgacctgctcgggccacggagcctgccaccacggtgaatgccac
tgtaacccgggctggggcggaatggactgtgcgatcctgagaagcacgtgtcctgaacag
tgctccagccacggaactttccacaccgagacgggaacctgcatctgtgaggctaactgg
acaggctccgactgctctgtagagatgtgcacggtggattgcggcccccacggagcatgt
gtcagtgggacgtgtcactgtgaggaaggatcggcaggctcagagtgcgaccagagggac
tgtcacccacgctgtacagatcatggcgtctgccgagaaggcaaatgtgactgtcaccag
ggctggacaggagagcactgcactattgctctggattcaagagtatcaggagcggtcaag
ataggatataaagatgggtgccctgggctgtgcaacagcaatgggaggtgcattctggac
caagccgggtggcgctgcatctgccaatcaggatggagagggctaggatgtgatgttgcc
acggagaccttctgctcagatggaaaggacaacgagagggatggactagtggactgtatg
gacccagactgctgttcgcagagctcctgccagggccagccctactgccgcggatcccca
gatcccacaagcatcgtgagccaaggtcaaggctcctcctccactcagtcggcccccagg
ggcttctacgagcgcatcagcttcctggttgggcatggcggtagtcacgtgatacctggg
gacaaccctttcaacagcagcctggcgtcaattatccggggtcaagtactgacgggagac
gggacgcccctcatcggcgtcaacgtgtccttccgggactaccctgagtatggctacacc
gtgacacgccaggacgggatgtttgacttgttggccaatggtggtgcctcgctgaccctg
agtttgaaacgtgatccttttcccacactgcaccgcactgtttggttgccctggaaggtg
ttccatgtgatggacacggtgatgatgaagagggagaacaacaacatccccagctgtcac
ctcattggactgctcaggcccagccccctcatcctggcctcccccctgtccaccttctac
aggagttctcctaaggacagccccatcatccctgagacccaggtcctccatgaggatgtg
gccatacccggaagtgacctcaatctggtttacctgagctcccgcacatccggctacaag
cccatcctcaaagtcctcatgacccaagaacgactcccgttcggactaatgaaggtccat
ctgaaggttgctgtcatgggcagattgttccagaaatcgttacctgcctttccagacctt
tcgtacacattcgtctgggacaagacggacgcctacaaccagaaggtctacggcttgtca
gaggcgatagtgtctgtgggatatgagtatgaatcttgcctggatgtgatcctctgggag
aagaggacagccattttacaaggttatgaactggatgcctctaacatggggggatggatg
ttggacaagcaccatgtattggacattcaaaatggtatcctctacaaaggcagcggtgag
aaccaattcatctcgctgcagccgcccgtcatctctacagtgatggggaacggtcggcgc
cgtagcatctcgtgccccagctgcaacggccaggccctgggcaacaagctattggcgccc
ctggctctggcgtggggcatcgacggcagcctctacgtgggcgatttcaactacatccga
cgcgtctacccgtcgggcaatgtcaccagcgtcatggagctcagtaacaaccctgctcac
cgctattacttggccactgacccggtgactgggcagctgtatgtgtcagacacctactca
cggaggatctaccggcccaaggtcctgacggggatcaaggaacttcagagtaacgcagag
gtggtggcagggaccggggagcactgtctgccatttgacgagacccactgtggggatgga
gccaaggccacggatgccctgctcactgggccaaaaggtatcgctgtggacaagaatgga
ctgatatactttgtggacggcaccacaatccggagagttgaccaacacggcatcatatcc
accctcctgggctccaacgacctcacgtcggcacgcccccttacctgtgacatcagcatg
gaaatcaatcaggtgctcctggagtggcccaccgacctagcagtcagccccatggataac
tccctgtacatcctggacaacaatgtaatcctacgaatcactgagaacggccaggtcagc
attgcagcgggccggcccatccactgcccgttggccgggatggaccgcggggcggccgga
ggtcaaagggcagcgctgacgcccctggagtccgccgttgcaatcgccgtgtcctactac
ggtgccatcttcgtcgccgaaaccgacgaacggaagcttagtcgaatccgaatgatatcc
atcgacggtgaaataacccatctggcagggtcgccctctgactgtgattgtaagaacgac
gtcaactgcgactgctaccagaccggcgagggctacgctaaagacgctcgtctcaacgtc
ccatcctctctggttgtggcgcctgatggcaccctgtacgtggcagacctgggcaacatc
cgcatacgggctgtcggtaggaacgggccagtgttgacctctaacaccaacaactttgag
gtggcgtcgcctgatgcccaggaagtgtatgtctttgacgccaatggtacccaccaacac
accaccagcctcctgacgggtgactttaagtacaccttcagctacagcatcgagaacgac
gttacagctgtgaccgatagcaacgggaacaccctgaggatccgccgagaccccaaccgc
atgcccgtgcgcatagtcgccccggacaaccaggtcatctggctgatcatgggaaccaac
ggtgggctaaagaccttgactgctcagggccaggaactggtgctactcacctaccatggt
aacactggcctactggctaccaagacctctgaaattggctggaccacattctacgagtat
gacagcgaaggcaggataatgaacgtgacattccccacgggaacagtgaaaaccctgtac
accgaaatctacaaggccttgactgtggacattgagagctccttgactgaagaggaaatg
agtattaccaccaatacctccaccatccgtgccttctatacactggctcaggatcaatgt
agaagcagttatcaggtgggctatgataactctctgaggatcacctatgccaacggaatg
gacacccactaccagactgagccccacatcctggcgggcactgccaaccccacagtggca
cggcgcaacatgagtttgccaggggagagtgggcagaatctggttgagtggcgcttccgc
aaggagcaggccaggggcaaagtcatcgtttttgggcgtaagctaagggtgaacggccgg
aacattctgtcggttgattacgaccgtacgctgaggacggagaagatatatgacgaccac
aggaagttcctgctgaagattatctatgacgccactggccaccctgtgctgtgggtgccc
agcagtaagatgctgcccgtgaacgtcagcctgagcagcaatgggcagatcaatgccctc
cagagggggccgaccacggagcggttggagtatgacagtcagggacgcctcgtgtccaga
gtgtttgctgacgggaagaggtggagttacacctatctggacaagtcgatggtgctcctg
ctccacagccagcgtcagtacatcttcgactttgactctcaggatcgactatctgcagtc
accatgcccagtgtggcacgctacaccatgcagacggtccgctcggtgggctactaccgc
aacctctttcacccacccgacagcaatgcctctgtcgctgtggactacagcgaggacggc
ctcctccagcgagtggcgcacttaggcacgggacgccaggtcctctacaagtatcggcga
cagaacaagctagccgaagtcctgtatgacatcacgcgggtcagcttcacctatgacgag
atggcgggcgtgctaaagacggtcaacctgcagaacgagggctttatatgttcgatccgc
tatcgtcaattgggccccttggtggaccggcagatcttccgcttcagcgaggacggcatg
gtcaacgcccgcttcgactacacctatgacagcagcctgcgcattaccagcgtgcagggt
gtcatcaatgagaccccactgcccatcgacctctaccagttcgacgacatatccggcaaa
gtcgagcagttcggcaagtttggcgtcatctactatgacatcaaccagatcatttccacg
gctgttatgacctacaccaagcactttgacacccacggccggatcaaggagattcagtac
gagatcttccgatccctcatgtactggatcactttccagtacgacgacgcggggcgatgt
accaagagggagatcaagatcggaccgtttgccaacaccactaagtacggctacgagtat
gatgtggatggccagctccagacagtctacctcaatgacaaggtcatgtggcgctacacc
tacgacctgaatggcaacctccacctactgaacccaggtaacggtgcccgcctgctcccc
ctgcgctacgacctccgcgaccgcatcacccgcctgggagacgtacagtaccgcatggac
gaggatggcttcctccgccagcgaggttctgagatctttgagtacaactccaaaggcctc
ctggcgcgcgtctatagcaagagcaacagctggatcatccagtaccgctacgacggcctg
ggccgaagggtgtccaccaaggccagcctggggcagcacctgcaatacttctacgcagac
ctgagctaccccagcagaatcacccacgtctacaatcactccagctctgagatcacctca
atgtactatgacctgcagggccacctgtttgcccaggagatcagcagcggagaggagtac
tacatcgcctgtgacaacaccggaacccctcttgccgtattcaccagcaacggcctcctg
attaagcaggtccagtacacggcgtacggggagatctactttgactccaacccggacttt
caactggtgctggggttccacgggggactctatgatccgctgaccaaattgttgcatttt
ggtgagagggactatgacattatgcccggcaggtggactgtgcctgacatcagcacgtgg
aaacgagtggggaaagagccaggtccttttaatctctatatgttcagaaacaacaacccc
atcagcaaagtacatgaagtgagagaatatgtggcagatgtgaatagctggctagtgacc
tttgggttccatctacacaacaccattcctggcttcccagtcccaaagtttgacctgacc
cacccctcctatgaactgaagaagagccagctttgggacgatctaccgtccatctctggg
gtccagcaggaagttaccagacaagcgcatgcccttctgtcatttgagcggctgccggag
gtccatgcgggccgaggacgtcgaggtgagaagccctggttctggttttcagccgcccag
tcccctatcgggagggctgtcatgttcgccatctacaagggcactgcccacactcacacg
ctcaatgtggccaacgaggactgcatcaaggttgccacagtcctcaacaatgccttctac
ctggaaaacctgcacttcaccgtggaaggccgtgacactcactacttcgtcaagccgggc
ctgcctgacggtgatcttgctgctctgcgcctcaccagcggccataagaccctggagaat
ggcgtcaacatcagcgtgtcccagtccaccacggtcatggacagccggacgcgtcgcttc
gcagacgtggagttgggttgtgggccactagcgctgcacgtgcgctatggctccacggtg
gatgaggaaaaggcccgcgtgcttgagttggcccgccagagggcgttagtgagtgcgtgg
gccaacgaacagcagagggtgagtgacggcgaggagggcgtccgcccatggacggaggga
gagaagaggcagcttctgagcagtgggaaagtgcaggggtacgacgggtattacgtactt
tccatcgagctatacccggagttagcggacagtgcgaaaaacattcagctcctacggcaa
agtgaaatagggaaaaggtaa
DBGET
integrated database retrieval system
