Oncorhynchus tshawytscha (Chinook salmon): 112256335
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Entry
112256335 CDS
T05605
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C
KO
K05450
platelet derived growth factor C/D
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04010
MAPK signaling pathway
otw04020
Calcium signaling pathway
otw04510
Focal adhesion
otw04540
Gap junction
otw04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112256335 (pdgfc)
04020 Calcium signaling pathway
112256335 (pdgfc)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112256335 (pdgfc)
04540 Gap junction
112256335 (pdgfc)
09142 Cell motility
04810 Regulation of actin cytoskeleton
112256335 (pdgfc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
otw04052
]
112256335 (pdgfc)
Cytokines and neuropeptides [BR:
otw04052
]
Cytokines
Growth factors (RTK binding)
112256335 (pdgfc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
PDGF
Motif
Other DBs
NCBI-GeneID:
112256335
NCBI-ProteinID:
XP_024285275
LinkDB
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Position
LG08:52372916..52458513
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AA seq
333 aa
AA seq
DB search
MILPLFILLVSLLQKHGSEAESSHISKFQQPSLKEQNGVQDSQHEKIIPVTGEGVIHSPD
FPLTYPRSTVLVWRLVASNDNMRIQLSFDERFGLEDPEDGICKYDFVELEEPSEDTIVGR
WCGSQVPASHMSKGGQIRVRFRSDEYFPSEPGFSIRYSLLPMPEVTPSLQSADALSEAVA
GLGTVEEVMKYLEPERWQLDMEDLYKPTWHILGKSFLHNKKSRGVDLNLLREEVRLYSCT
PRNFSISLREELKRTDAIFWPSCLLVKRCGGNCACCSHRCTDCQCVPSRVVKKYHEVLLL
KHRSGGRGLQKSMTDVPLEHHEECDCVCKDDWD
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgatccttccattattcatcctacttgtgtcgcttctccaaaaacatggctcagaagct
gaatcaagtcacatcagcaaattccaacaaccaagtttaaaggaacaaaacggagtccaa
gattcccagcatgagaagataatccccgtcacaggagagggagtgatccatagtccggac
ttcccactcacctaccccaggagtaccgtgttggtctggagactagtggcctccaatgac
aacatgagaatccagttatccttcgacgagaggtttggcctggaagacccagaggatgga
atatgcaagtatgattttgtggagctcgaggagccgtccgaggacaccatcgtgggccgc
tggtgcgggtcccaggtacccgccagccacatgtccaaaggcggtcagatccgggtgaga
ttcagatctgatgagtacttcccctccgagcctggcttcagcattcgctactccctgctc
cccatgcccgaggtaactccatctctgcagagcgcagatgcgttgtctgaggccgtggct
ggcctcggtaccgtggaggaggtcatgaagtacctggagcctgagagatggcagcttgac
atggaagacctatacaagcccacgtggcacatcctggggaagtcattcctccacaacaag
aaatccagaggagtggatctcaacctgttgagagaagaggtgagactgtacagctgcacg
ccccgcaacttctccatctccctgcgcgaggagctcaagaggacggacgccatcttctgg
cccagctgcctcctggtgaagcgctgcgggggcaactgtgcctgctgctcgcatcgctgc
accgactgccagtgtgtgccttcccgggtcgtcaagaagtaccacgaggttctcctgctg
aagcaccgaagcgggggccgaggcctgcagaagtccatgaccgatgtgcccttggaacac
cacgaggagtgcgactgtgtttgcaaagacgactgggactga
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