Oncorhynchus tshawytscha (Chinook salmon): 112256376
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Entry
112256376 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional regulator Kaiso
KO
K10507
zinc finger and BTB domain-containing protein 33
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112256376
04121 Ubiquitin system [BR:
otw04121
]
112256376
03036 Chromosome and associated proteins [BR:
otw03036
]
112256376
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
112256376
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
112256376
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
112256376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-H2C2_2
zf-C2H2_4
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
112256376
NCBI-ProteinID:
XP_024285355
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All DBs
Position
LG08:49491993..49499266
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AA seq
638 aa
AA seq
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MSGLKLISATDTRYSGMVLKSMNRQRNNGLFCDVTIIIQDRKFRAHKNILSASSTYFHQL
FSVAGQVIELNFIKAEIFEEILNYIYSSKIVRIRSDMLNELINAGQVLGVKFIANLGVPL
SQVKGLPGLSKDTEHNEVSSVEKSSTDSMGMMPIVTESFSLSAEEFSQTDKSANKDQDSD
DDDIMFVSKTDATKKCKPCEIIDLDGPNTEEDSVTKQPGEARPALTKDQEKTVKAAPHLN
SSLQTLQGQTPLIRPMVSPDTSSNIASSPTGASSCSTPTTPARIGTFTPEPISTSLPSEN
HKIIGIHKKQVTLARQSDLKIKLSALKSPGGFINEAGLNIPQISVTTKKTITLDKASEID
SFSPGCKVYANIGENTYDIVPMKDDPGEGDSKNSRGGKRSLMGTPLQPFNTSQLPPGATI
KKTKTEQQDHYELIMDGKTFFVCMVCKRPYVCLTSLRRHFNTHSWEKKYPCHYCDKVFAL
AEYRTKHEIYHTGERRYQCLLCNEMLINYQLLSTHCKQAHNQDPSGRKQKDDTDNNLYRL
LPCKTVQFKTYSHETDDSDSRGVPIIQEDGSVQHINPGRGHLANPLQLQSTQGKMLNWDD
IFVEPEAQPGSGAHRPGSHPIQSPPGSSEFEFVIPETY
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcctaaagctgatctctgcaactgacacccggtattcaggaatggtgctgaag
tcgatgaatagacagcgaaataatggattgttctgtgatgtcaccataattatacaggac
cgaaaatttagagcacacaaaaacatcttgtccgcgtcaagtacttatttccaccaactc
ttctcagtggctggacaggtgatcgagttgaatttcatcaaggcggaaatctttgaggaa
atcctgaattacatttacagttccaaaattgtccgcattcgctccgacatgctcaatgag
cttatcaatgctgggcaggtgttgggcgtgaagttcattgcgaatctaggcgtaccgctc
tcacaagtcaagggcctacctggcctgtccaaagacacagaacacaatgaagtaagctct
gtggagaaaagcagtacagactcaatggggatgatgcctattgtcaccgagtccttttca
ctgtctgcagaggagttcagtcaaactgacaaaagtgcaaacaaggatcaggactcggac
gatgacgacattatgtttgtatccaaaacggacgccaccaagaaatgcaagccctgcgaa
atcatcgatttggatggacccaatacagaggaagactctgtgacaaagcaaccgggagag
gccaggcccgctttgacaaaggaccaagagaaaacagtcaaagcagccccgcacctcaac
agctccttgcagaccttgcaaggccaaactcctctgatcagacccatggtgtcccctgac
acaagctcaaatattgcgtcttcacccactggagcctcctcttgcagcacacccactacg
ccggctagaattggcactttcacccccgaacccatcagcacctccctgccctcagaaaac
cacaagataataggaatccacaagaagcaggttacactagctcgacagagtgacttaaaa
atcaagctctcggcccttaagtcacctggcggattcatcaacgaggcaggcctcaacatt
ccccaaatatccgtcaccacaaaaaagacgataacactagataaagcctcagagatcgac
tcgttttctccaggctgcaaggtgtatgccaatattggggaaaacacatatgacattgtc
cccatgaaggacgaccccggggagggagactctaaaaacagtagagggggaaagaggtct
ctgatgggtacccctcttcaacctttcaacacctctcaactgccaccgggtgccacaatc
aagaagaccaaaacagagcagcaagatcactacgagctcatcatggacgggaagactttc
tttgtgtgcatggtctgcaagcgtccctacgtgtgcttgacgagcctccggcgccacttc
aacacccactcctgggagaagaagtacccgtgccactactgtgacaaggtgtttgctctg
gccgagtatcggaccaaacacgagatctaccacacaggcgagcggaggtaccagtgcctg
ctgtgcaacgagatgttaatcaactaccagctactgtcgactcactgcaaacaggcccac
aaccaggacccatccgggaggaaacaaaaggacgacaccgacaacaacttgtaccgcctg
ctcccttgcaaaacggtgcagttcaagacctactcacatgagacagacgattcagattca
cgaggggtccctattatccaagaggatgggagcgtccagcacattaaccctggaaggggg
cacctggccaacccactacagttacagtccacccagggcaagatgttgaactgggatgac
atctttgtggagcctgaggcacagcctggatcaggtgcccaccggccagggagccaccct
atccaatctcccccaggctcttctgagtttgagtttgtcataccagagacgtactga
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