Oncorhynchus tshawytscha (Chinook salmon): 112256396
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Entry
112256396 CDS
T05605
Name
(RefSeq) WD repeat-containing protein 20
KO
K24741
WD repeat-containing protein 20
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112256396
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
112256396
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WDR55
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_NUP159_NUP214
PD40
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_EML
Ge1_WD40
eIF2A
Motif
Other DBs
NCBI-GeneID:
112256396
NCBI-ProteinID:
XP_024285408
UniProt:
A0A8C8CNZ3
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All DBs
Position
LG24:8407363..8420535
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AA seq
597 aa
AA seq
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MAAEGGGKENNEIKTQFTTREGVYKLLTHSEYSRPNRVPFNSQGSNPVKVSFVNVNDQSG
NGDRICFNVGRELYFYIYKGVRKAADLSKPIDKRIYKGTQPTCHDFNHLTATAESVSLLV
GFSAGQVQLIDPIKKETSKLFNEERLIDNSRVTCVKWVPGSESLFLVTHSSGNMYLYNME
HTCGTTAPHYLLLKQGENYSVHTCKSKSTRNPLLKWTVGEGALNEFSFSPDGKFLACVSQ
DGFLRVFNFDAVELHGTMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFVDCRVIARG
HGHKSWVSVVAFDHYTTSVEDADPMEFSGSDEDFQDQIHFGRDRANSSQSRLSKRNSTDS
RPVQVTYRFGSVGQDTQLCLWDLTEDILFPHLPLSRTRTHTNVMNATSPPAGGDVAVGGG
VGGGIESINPSTNGTNTPGNPLPTPLPRSNSLPHSAAMTANSRISVMDNTIAAGVSKFAT
LSIHDRKERHHEKDHKWNHSMGHISSKSSDKLNMLTKTKTDPAKTLGTLLCPRMEDIPLL
EPLICKKIAHERLTVLIFIEDCIVTACQEGFICTWARPGKVGLSSQNQASSPSGTVV
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagggaggagggaaggagaataacgaaattaaaactcaattcactacacgg
gaaggcgtctataaactcctcactcattccgaatatagccgccccaatagggtgcctttc
aattcccagggttcgaaccctgtcaaagtttcatttgtcaacgtcaatgaccagtctggc
aacggcgaccgaatatgtttcaatgtgggccgggagctgtacttctacatctacaaaggc
gttagaaaggctgctgatctgagcaaacctatcgacaagaggatatacaaaggaacacag
cccacatgtcacgacttcaaccacctcacggccacggcggagagcgtctccctgttggtg
ggcttctcggctggccaagtgcagctcatcgacccaatcaagaaggagaccagcaagctc
ttcaatgaggaaagactaatagacaattccagagtaacttgtgtaaaatgggtgccaggc
tcggagagtctgttcctagtcactcattccagtggaaacatgtacttgtacaacatggag
cacacgtgtggcaccacggcacctcactacctgttgctcaaacagggtgagaactactca
gtgcacacttgtaagagcaagtccacgcgcaaccccttgctcaaatggacggtgggcgag
ggagcccttaacgagttttctttctcacctgatggaaagttcctggcgtgcgtgagccag
gacggcttccttcgggtcttcaactttgatgcggtggagctgcacgggaccatgaaaagc
tactttgggggtctgctgtgtgtgtgctggagtccagacggaaagtacattgtcacgggg
ggcgaggatgatctggtgactgtgtggtcatttgtggactgccgggttattgcacgcggt
catggacacaagtcgtgggtgagtgtggtggcgtttgaccattacacaaccagtgtggag
gatgcggaccctatggagttcagcggcagtgacgaggacttccaggaccagatccacttc
ggtcgcgaccgggccaacagctcgcagtcccgactctctaagcgcaactccacggacagt
cggccggtacaggtcacatacaggtttggttcagtgggccaggacactcaactctgcttg
tgggacctcacagaagatatccttttcccccacctcccactttcccggacaagaacgcac
accaatgtgatgaatgctaccagccccccggcgggaggggacgtggctgtgggaggcggg
gtaggtggtggcatagagagtattaaccctagcactaacggcaccaacacccctggtaac
cccctccctactcccctgccacgctccaacagcttaccgcactctgcagctatgaccgcc
aacagcaggattagcgtcatggacaacactatcgccgcaggcgtaagcaagtttgccaca
ctctccattcacgatcgcaaagagcggcaccacgagaaggaccacaaatggaaccacagc
atgggccacattagcagcaagagcagtgacaagctcaacatgctcaccaaaaccaaaaca
gaccctgcaaagacactgggtacgctgctctgtccccgcatggaagacatacccttacta
gagcccctcatctgtaaaaaaatagcacatgagagactgactgtcttaatatttattgaa
gactgtatagtgacagcttgtcaggagggatttatttgcacatgggcaaggcctggcaaa
gtgggtttgtcatcccaaaaccaagccagctctcccagtggaactgtagtatag
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