Oncorhynchus tshawytscha (Chinook salmon): 112256480
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Entry
112256480 CDS
T05605
Symbol
tonsl
Name
(RefSeq) tonsoku-like protein isoform X1
KO
K09257
NF-kappa-B inhibitor-like protein 2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112256480 (tonsl)
03400 DNA repair and recombination proteins [BR:
otw03400
]
112256480 (tonsl)
Transcription factors [BR:
otw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
112256480 (tonsl)
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
112256480 (tonsl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
Ank
Ank_2
Ank_4
Ank_5
LRR_6
TPR_1
TPR_8
Ank_3
TPR_7
TPR_2
LRR_4
TPR_MalT
RPN7
TPR_10
LRR_At5g56370
Ank_KRIT1
LRR_Zer-1
TPR_21
Motif
Other DBs
NCBI-GeneID:
112256480
NCBI-ProteinID:
XP_042181483
LinkDB
All DBs
Position
LG08:40975434..41001386
Genome browser
AA seq
1428 aa
AA seq
DB search
MYTAREVKQLQKAKSKAQSNNNLSEEASLCNQLGEVLSRNGDYGAAIEEHRQELQISTAM
HDVIGRAVANRKIGECYAEMGNFEPALKHQRCHLDLARSVNDHAEEQRALATIGRTFLFR
YESDQSRDSLKQAEDAFRKSMAIVDKELEGSVAALELSEMRARLYLNLGLVCDHLGEPKQ
CSEYIRLSVYIAEKNQLLEDLYRANLNLGNIYFRNGQHSNALRSLEQAKECARKIKDKFS
ESECFHSIGKVQLSLGDFVAARRSLKKAFSLGSQQDVDREAVKKAFKQAIRGSQLEEAAG
ELGDEGRSQEAVGLAEQLGDLYCKVGCYRKALDAYRTQLSSAEALGKPARELAVIHVSLA
ATYTDIRQHDKAVEHYRQELALRQGNPKEECNTWLNIAAAQEENGRTVEDVDCSYDTALR
CAQRAGQPKLQMRVLKTWLAAQSRGGSSQTDDTQARLEELCATEGWSPEGGSEGEEDEEE
MENSEPMEDSDIQFSDSEDDDKMVCSGRRKPARWNKRNEKGETSLHRACIDGNLKQVQYL
VEQGHPVNPRDYCGWTPLHEASNHGHTDVVALLLERGADINDPGGSLCEGVTPLHDALNC
GHFQAARLLVERGASVTVRNAKGETPLDSLRLWQRMYRRELDQEARHELSSTEELLRRAL
AGLVSTAPAPPKPFDALQDSQLFDAENSEPLIPTGGHHSSTNSQPRTRSPKESAVPPIPK
PRHSNGTAGPQQRHRGTEASILFGDDSSSPDHSDLDGAVSPLRPVRPRRRFRAAPAPQEV
PPSQETSSSVPEARESAVPSVFGREEYHSAIRSLGSAKTRLLSQSLPQFSSTPAVSSNSR
PALVPEEEYLIDDWLENDMGNVHPKKKRRVGEEQNGRRDLNMMSSGARSQNCRSTTTEMA
SRVSTSSSRGLPLRGMPRQVKMTQLSGMVMLGRREVSRPQSPTVTDDDDPQASTPPQTRY
STQQVPNQTVAAPMLAPIRMRVRVQANVFLIPVPHSEADSCTVSWLCEQAAQRYYQACGL
LPRLSLQKEGALLSPQDLLLAVLHTNEEVLAEVCSWDLPPLPERYKKACRSLAVEENKRV
ARLCEVQDGSPSVSVCGLSLPPSSLSPLLRALKLQASLTQLHLSGNRLHDDLFPELVAAA
VTMPRLRHLDVSSNHITGEGLKKAANALEGQTQPAFPCLEELDLSVNPLGDGLSQALSCL
LSACPLLASLSLQACNLTARCLQQHRLLLARALAGTGHLKSVNLSHNALGSTGFELVLKT
LPLHCLTHLHLSAIRCGPADHPALEHLTSVLSQDDCSLTHLSLGGNGLTDNSVATLARCL
PVCPSVVSVDLSGNPAVTSAGLYSLLSALRDAQRPLTHLNLQGCQVAGPWDSCSLDGLSE
QVQDLRLCSQRLNKLDREVLQQTWGQRPPVGHFLSRDAKCLLTVAPSL
NT seq
4287 nt
NT seq
+upstream
nt +downstream
nt
atgtacactgcccgggaggtaaaacaactacagaaagcaaagagtaaagctcagagcaat
aataatctgagcgaagaggccagtctgtgcaatcaactgggagaggtgctgtcacgaaat
ggcgattacggagctgccattgaggaacatcggcaggaattgcaaatttccacggcaatg
catgacgtcattggacgtgcagtggccaatcgtaagattggggagtgttatgcggagatg
gggaactttgagccggctttgaagcaccagcggtgtcatcttgatctggctcgctccgtc
aatgatcatgcagaggaacaaagggcactggccaccattggaagaaccttcctcttccgc
tacgagtctgaccaatcgagggacagcttgaagcaggcggaagatgcctttaggaagagc
atggctattgtggacaaagaactggaaggatccgtggctgctctggagctgagtgagatg
agggctcgcttgtacctcaaccttgggctggtgtgtgaccacctgggggagcccaagcaa
tgcagtgaatacatccgcctcagcgtctacattgcagagaagaaccagctcctggaggat
ttgtaccgtgccaacttaaacctgggcaacatctacttccgaaacgggcaacactccaat
gccctgcgcagtctcgagcaggccaaggagtgtgcccgcaagatcaaagacaagttcagc
gagagcgagtgcttccactccatcggcaaggtgcagctgtccctgggggactttgtggcg
gccaggcgttccctgaagaaggccttctctctaggctcccagcaggatgtggacagggag
gctgtgaagaaggccttcaaacaagcgattcggggcagtcagctggaggaagcagcaggg
gagctgggtgacgaggggcgttcccaggaggctgtgggactggcggagcagctgggggac
ctctattgtaaagtgggatgctaccgcaaagccttggacgcctaccgtacgcagctatcc
agtgcagaggcgttggggaagcctgctcgggagctggctgtcattcacgtgtccctggcg
gccacctacacagacatcaggcagcatgacaaggctgtggaacattacagacaggagctg
gccctcagacagggcaaccccaaagaggagtgtaacacgtggctgaacatcgcagcagcc
caggaggagaatgggaggaccgtggaggatgtggactgtagctacgacactgccctgcgc
tgtgcacagagggctggccaacccaaactacagatgcgagtgctgaagacgtggctggct
gcccagagccgcgggggctcgtcacagactgatgacacgcaggccaggctagaggagctg
tgtgccaccgagggctggagtcctgagggggggagtgagggagaggaggacgaagaggag
atggagaacagtgaacccatggaggacagcgatatccagttctcagactctgaggacgat
gacaagatggtctgtagcggcaggagaaagccggctcggtggaacaagaggaatgagaaa
ggggagacgtctctccacagagcctgtatagatgggaacctgaagcaggtccagtacctg
gtggagcagggtcatcctgtcaaccccagggactactgtggctggactcctctccacgag
gccagcaaccacggacacacagacgtggtcgctctgttgctagaaaggggggctgacatt
aacgacccaggggggtcactgtgtgagggcgtcacccccctgcacgacgctctcaactgt
ggacacttccaagcggccagattactggtggagaggggggcctcagtcactgtccgcaat
gccaagggtgagacacccctggacagtctgcgtctgtggcagaggatgtacagaagagag
ctggaccaggaggccagacatgagctgtccagcacagaggagctgctgaggagggcccta
gcagggttagtctccactgctcccgcgccccccaagccatttgatgctctgcaggacagt
cagctgtttgatgctgagaactcagagcctctgatccccaccggagggcaccattcgtcc
accaacagccagcccagaaccaggagccccaaggagagcgcagtaccacctatccccaaa
ccaaggcactccaacggcacagcggggccccaacaacgacacagagggacagaggcctcc
atcctctttggggatgacagcagctcccccgaccacagtgacttggatggcgcggttagc
cctctgcgccctgtccgaccacgccgacgtttccgagcagccccagctccacaggaagtt
ccccccagccaggaaacaagctcttctgttcctgaagcgagagagtctgcggtaccctct
gtctttggcagggaggagtaccacagtgccattcgcagcctaggcagtgccaagacccgc
cttctctcccagagcctgccacagttcagcagcacaccggcagtgtcgtccaatagcagg
ccagcgcttgttcccgaggaggaatatctgatagatgattggctggagaatgacatgggc
aatgttcacccaaagaagaagaggagagtgggggaggagcagaatggaaggcgggacttg
aatatgatgtcatcaggggccaggagtcagaactgtcgttcaaccacgactgaaatggct
agcagagtgtcgacctcctccagtaggggtctccctctgcgcggcatgccgcggcaggtg
aagatgactcagctctcaggcatggtaatgctgggccgccgagaggtcagcaggccacag
agtcccaccgtaactgacgacgacgaccctcaagcttccacgccgcctcagacccgctac
agcactcagcaggtcccaaaccagacagtcgctgcgccaatgcttgcaccaatcagaatg
cgggtcagggttcaagctaacgtgtttctgataccagtaccacatagcgaggcagactca
tgcacggtgtcgtggctgtgtgaacaggcggcccagcgctactaccaggcctgtggcctc
ctgccacgcctttcgctgcagaaagagggcgctctgctctctccccaagacctgctactg
gctgttctccacaccaatgaagaggtcctggctgaggtgtgttcgtgggacctcccccct
cttcctgagcgctacaagaaggcctgtcgcagcctggcagtggaggagaacaagcgtgtg
gctcgtctgtgtgaggtgcaggacggcagtccctctgtgtcagtgtgtggcctcagcctg
cccccctcctccctctcccctctcctccgtgccctcaaactgcaggccagcctcacccag
ctacacctgtctggcaaccgtctccacgatgacctcttccctgagttggtcgccgctgcc
gtcaccatgccccggctccgccatctggatgtgtcctccaatcacatcacaggggagggg
cttaagaaggcggcgaacgccttggaagggcagactcaacctgctttcccgtgtctggag
gaattggacctgagtgtgaacccgctgggtgatggtctgtcccaggccctgtcctgcctg
ctgtcagcgtgccccctactggccagcctctccctgcaggcctgcaacctcacagcccgc
tgcctacagcaacatcgtctcctactggccagagccctggcaggtacagggcacctgaag
tctgtgaatctatcccacaatgctctgggctctacaggctttgagctggtcctgaagact
ctgcctctccactgtctcacacacctccatctgtctgccatccgctgtggacccgctgat
caccctgctttagaacacctgacgtcagtcctgtcccaggatgactgctccctgacccat
ctaagcctggggggaaatggactgacggacaacagcgtggccaccctcgccagatgtctg
cctgtctgtccctccgtggtgtctgtggacctgtcagggaacccggcggtgacctcagca
ggactctacagcctcctctccgccctccgtgacgcccagagacctttgacccatctcaac
ctccaaggttgtcaggtagccggcccctgggacagctgtagtttggacggcctgtcagaa
caggtccaggacctgcggctgtgctcccagaggctcaacaaactggaccgtgaggtcctg
cagcagacctggggccagaggcctcccgtgggccacttcctctccagagatgccaagtgc
ctgctcactgttgccccctcactatga
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