Oncorhynchus tshawytscha (Chinook salmon): 112256532
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Entry
112256532 CDS
T05605
Name
(RefSeq) LOW QUALITY PROTEIN: rab3 GTPase-activating protein non-catalytic subunit
KO
K19937
Rab3 GTPase-activating protein non-catalytic subunit
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112256532
Membrane trafficking [BR:
otw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112256532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAB3GAP2_C
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
112256532
NCBI-ProteinID:
XP_042181413
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All DBs
Position
LG08:complement(36245531..36270344)
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AA seq
1363 aa
AA seq
DB search
MSCCLFEYCRVQELKAVREFLFQSQQNNNSSADKKGENELAWDDSNWGSWDKPEAKEVGS
GETTGVEEDTAAVSAPWLQDCVVSLSPCSDLMVVAKGSKAVFLSARWQTDDGGREGMTLA
VSWSGTLSTNEGESVSNVICIPLASQKRSSTGRPDWTCIVVGFSSGYVRFYTESGVLLLA
QLLNEDPVLRLKCRTYEIPRHPGVTEQHEELSILYPAALVTIDGFSLFQSLRACRNQVAR
AAAAGSEVVQPPPLAYKKWGLQDMDAIVDHSSVGIMTLCVFDQMRNASILGGFHASVKGS
LPAMSQYITVGGGPYTGFYYAIEGSSQPLLSHVALAVASKLTSALFTAASGWLGWKKQNE
EEPIQKQKPKVEPATPLAVRFGLPDSRRHGESICLSPCNTLAGVTDDFGRVMLLDVGRGI
AIRMWKGYRDAQLGWVQVSEGRGESSPSAPLPRRHAQFLVIYAPRRGILEVWGTQQGPRV
GAFTVGKHCRLLYAGYRLMGVNSVTSQGWQLHTQQVCLFDPATGALRTVTVPFHLALSDK
KSERAKDLHLLKRLTTLLKSRELEPDYLESEAQRVLLDIKHPAIKKQALECLLANKNAPV
SCLTNITRLLLASLRGKDPEAVDEALLQLCSSQLKLLQLYTDIQQLHSTVEASTDAHTKP
TELAGVEEELARVSLILQRYTELTSGSRPSVSFAQDSPDASLPVRGFLSQMECEGEELRV
VPGPDADWTQLGSFLFWGCLIGESPLQKVCDTLQETGISPQHLLSLLLSVWLHREKEVLK
KPKAVRHLHTLLTALSSMKGAVESSWDMQCVSPWWQQVRSACVQSHSAAAALLAAIVAHR
AAKDNITSLAETKFQSEWEAVSLELEQWAVCVRQLEDVLALQTLLCVAPLKGTPGGATPH
CSVKALLEGGRGGIADSVAKWVFRQDLAPERLKDMLQRGEAQRTEQPSQPVLREKSQEDA
DFNRAAELLVSVCQRFPDSLSPDLLFAHCCWEYVVQWNKYPEEGRYLCCAVEHLKLVSSP
HIQLGISSMMWNTFIVKRFSAAAFLMEKVGKAPKDRLCRRDVGMGDGATTSFLGSCVALL
QILMEADSGIEEVXPPELCVEEVWGVAEGPASIVELALEQRGIHYPLVQHHCLLATLLHT
AMTFNLRVKPLSLFDSKGKSAFFRELVSIQLMPSGDMDPGLVSLRQEFLLRVLTGWVKTQ
SEAGMAPASTRLDLDSGDETWPSLCLDLGTLLQVNPDVLRRHLVCELYNHGLDPRAEQVM
LEVEDKDVLGSQLLVLTGQRLSYSLLHTQTQTKPAMELLARLPPTLCTWLKAMDPSELGC
LSVPLSQTSRLVSRLIEILPENHGQYSLALHLLEAVEVLQGED
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgctgcctgttcgagtactgtcgggtccaagaactcaaagcagtccgggagttc
ttgttccagagccagcaaaacaacaattcctcggcggacaagaaaggagagaatgagctg
gcctgggacgactccaactgggggtcatgggataagcctgaggccaaagaagttggaagt
ggggaaaccacgggggtggaggaggacactgcagcagtcagcgccccctggctgcaggac
tgtgtggtgtctctgtctccctgctcagacctgatggtcgtcgccaaaggcagcaaggct
gtgtttctttcagcgaggtggcaaacagatgacggaggcagagaggggatgacgctggct
gtgtcctggagtggaactctcagcaccaacgagggggagagtgtgagcaacgtcatctgt
atacctttggccagccagaagaggagttccacgggtcgaccagactggacatgtattgtc
gtgggcttctcatctggctatgtacgcttctacaccgagagtggggtcctactcctagcc
cagctgttgaatgaggatcctgtcctgaggctcaagtgtcgcacttatgagatcccccgc
caccccggtgtcaccgagcagcatgaggagctgagtatcctttacccagcagccctggtc
accatcgacggcttcagtctcttccagtctctacgggcctgcagaaaccaggtggctcga
gcggcggcagcaggcagtgaggtggtccagcctcctcctctggcctataagaagtggggt
ctacaggacatggatgctatcgtagaccacagcagcgtgggtataatgaccctgtgtgtg
tttgaccagatgaggaatgcgtctatcctggggggtttccatgcctctgtgaagggcagc
ctccccgccatgagtcagtacataactgtggggggaggaccctacacaggcttttactat
gccatagagggcagctctcagcctctcctctcccacgttgctctggctgtggccagcaaa
ctcacatcggccttattcaccgccgccagtgggtggctggggtggaagaaacagaatgag
gaggagccaattcagaaacagaagcctaaggtggaaccggccacgcccctggcagtcagg
tttggtctcccagactcacgacgtcatggggagtccatctgtctgtccccctgtaacact
ctggctggggtcacggacgactttggcagggtcatgctgctcgacgtggggagaggcatc
gccatccgcatgtggaagggctaccgggacgcccagctgggttgggtccaggtgtctgag
gggaggggcgagtcctccccgtccgcgcccctcccacggcgccatgctcagtttctggtc
atctacgcccccagaagaggcatcctggaggtgtggggcacacagcagggcccccgagta
ggagccttcactgtcgggaaacactgcaggttgctgtatgcaggctaccggctgatgggg
gtgaacagtgtgaccagtcaaggctggcagctccacacacagcaggtgtgtctgttcgac
cctgctactggagcactacgcactgtcactgtcccgttccatctggccctcagtgataag
aagagtgagagagcaaaggatctgcacctgctgaagagactgaccacactactgaagagc
agagagttggaaccagattacctggagagcgaggcccagcgtgtactgctggacatcaaa
caccctgccattaagaaacaggccctggagtgtctgctagccaataaaaatgctccagtc
tcctgtctgaccaacatcacccgactcttactggccagtctcagggggaaagaccctgag
gcggtagatgaagcattgctccagttgtgttcctcccagctgaaactgctccagctctac
actgacatccaacagctgcactctactgtggaggctagcacagatgcacacactaaacct
acggagcttgccggtgtagaggaggagctagcccgtgtctccctcatcctgcagcgctac
accgagctcacctccggctcccgcccctccgtctcatttgcccaggactcccctgacgca
tcacttcctgtacgcggcttcctgtcccagatggagtgtgaaggagaggagctcagggtg
gtcccagggcctgacgcagactggacacaactggggagctttctgttctggggctgtctg
ataggagagagccctctacagaaagtctgtgacacactacaggagacaggcatcagccca
cagcatttactgtctctgctgctgagtgtatggctgcacagagagaaggaagtattgaag
aaaccaaaggccgtcagacacctacacacactcctcactgccctcagctccatgaaaggt
gcggtggagtcgtcgtgggacatgcagtgtgtctccccctggtggcagcaggtgcggtct
gcgtgtgtccagtcacacagtgctgctgctgccctgctggctgcaatagtggctcaccgc
gctgccaaggataacatcaccagcctggccgagactaagtttcagtcagagtgggaggcg
gtgtcgttggagctggagcagtgggcggtgtgtgtgagacagctggaggacgtgctggcc
ctgcagacgctgctgtgtgtggcgcctcttaaaggaacaccagggggcgccacaccacac
tgctcagtcaaagccctgctggaggggggccgaggtggtatagcagacagtgtggctaag
tgggtgttcaggcaggacttggcccctgagcggctaaaggacatgctgcagaggggggag
gcccagaggacagaacagccctcccagccagtgctgcgggagaaaagccaggaggatgca
gacttcaatagggcagcagagctgctggtgtctgtgtgtcagcgtttcccagactccctc
tctcctgacctgctctttgcccactgctgctgggagtatgtggtgcagtggaacaaatac
ccagaggaggggcggtatctgtgttgtgcagtggaacacctgaagctcgtctctagtcct
cacatccagctgggcatctcctcaatgatgtggaacacgttcatcgttaaacgtttctca
gctgctgctttccttatggagaaggtggggaaggcccctaaagaccgcctgtgtcgacgg
gatgtgggaatgggagacggtgccacgacatcattcctgggctcctgtgttgcgctgcta
cagattctgatggaggcagactcggggatagaagaggtgnaccctccagagctgtgtgtg
gaggaggtgtggggggtagcggagggtcctgcctccatagtagagttagccctggagcag
agaggaatccactacccccttgtacaacaccactgtctcctggccactctactacacact
gctatgaccttcaacctccgggtcaaaccactcagtctgttcgacagcaagggtaagagt
gccttcttcagagagttggtgtccatccagctgatgcccagcggagatatggaccctgga
ctggtctctcttagacaggagttccttctcagggtgttgacaggctgggtgaagacccag
agtgaggcagggatggctcctgcatccacccggctggaccttgactcaggggacgagacg
tggccctctctgtgtctggacctggggaccctgctgcaagtcaacccagacgtcctgcgc
agacacctggtgtgtgagctgtacaaccatggcctggacccccgggcagagcaggtgatg
ttggaggtggaggataaggacgtgttgggttctcagctgttggttctaacaggccagagg
ctgagctactccctgcttcacacccagacccagaccaagcccgccatggagctgctggca
cgcctcccccccacactctgcacctggctcaaggctatggatcccagtgagctggggtgc
ctgtcggtgcccttgagccagaccagcaggctggtgagccgcctcatagagatcctacct
gagaaccacggccagtacagcctggcactacacctactggaggctgtggaggtcctgcag
ggagaggactga
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