Oncorhynchus tshawytscha (Chinook salmon): 112256535
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Entry
112256535 CDS
T05605
Name
(RefSeq) uncharacterized protein LOC112256535 isoform X1
KO
K25509
beta/gamma crystallin domain-containing protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
otw04812
]
112256535
Cytoskeleton proteins [BR:
otw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
112256535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Crystall
IL4_i_Ig
Ricin_B_lectin
Motif
Other DBs
NCBI-GeneID:
112256535
NCBI-ProteinID:
XP_024285619
LinkDB
All DBs
Position
LG08:35997554..36049240
Genome browser
AA seq
2626 aa
AA seq
DB search
MSKSGTFKINNLFHKTKSLDKVNKDGGKNTFIDATSYVDGEPSSPLRSSRGLVSPKDGTF
PGDILPTSPPSEEKKKKKRFLSFRLKKKRSKDSGSIDDQLFCTGADELDSFSSNMSFDQL
SVSTEYSVNSTRTERDRDATSMFSFDMSAFNSLSPTKSRNKSSDGMLNRISSLFSTKKKK
SRSGSLSVGSEDGSWLGPGSPNSPPSPGSPLSPHQKDGLRTTTTQKEGEVVEAGAGPVLE
SLSELQAKGSVFSSSTRPSTSSLASLLEADTGDLPFADSDSSARGSVREVQVCRVSRAEA
ESDGEADRNSGNLTPTNVFPSGAEQAPELGLTKDVVEEVNRRLQVYLKEQSTVKDGEGSE
WGSPVVQTTLRSFELSQSHLKTDVTSLGIESKKTSLKTSVGGKGSYLLGVTLASQSHTPS
SSDPQPEGEEGENSPAMGKKNRRRARKPTSVSSAETAPPSQMTLPGGEGTRRDSPAKLHK
PVSVETHLGEEPIPVSVAPVVYTDTAGVLATVTLSAVSGGREPELAVSTAPVSKDSETNK
ARPEETSPATDSECSPPLEDQTALSKEEKRRSVKLSHSEKLFTKKVYVSPEPSFDGDEQT
ERELENNDIVDLASKIPQKSEVKLLPSLKKVNVNLKEPNNDCIISVGEITEGTDFDLSHH
EPKAVDSSPTPDLDEASPTTTMPGRKTQPNTGGSGVRGQGMPQVTPSKPGDKVGHVASRL
KSPSPSVGPKSKAGLDMAKGKVLTDGGKSGVSSGAPSQRTTKDGGEKTEVMPSTSKGQLT
AEKTEVTDSPKSRIPKKSLSESALKPPVSPDTTSVVDVSEVVPVAGSKQQKTPEPKHLMM
KTGTKPIVEEVKGVGSGEKQTSAPVKSEEVSPTKVPLMSPVKFSKDKSKDSSDKVNLVNG
LEKDPEDNTTTAKTSEPKDVKKQTPTHPDSNNSSMIPKSRLPKAPDNSSVRKAKNGKLQT
IDTGSKKTKTTERASGVSSWPSTPTSPKQQELPSPEERPTDETLIPEPEKGSKLPCPLPT
NLPQQLSNKSTPHDDGDTPTSPALVPTKSEKPAFLRLKKQSNITSPIMNKTAEDAGSLKS
PVKDPSDSVTVASKLPMFRQKTPPKGKRSKPLKKFEQTVNSETLSETQSTPVQDHVSLIT
DNSQIEDQQTKPATGSSLVADCSTELVKYQTNKPAITGTKESLKDSSSSTPVTKLDAKSE
IAQEKSLSVRTTSVTQKHQTKPPPDLSSEIDRDYVEALTDTPQLLTGNVEPGVVVEKRPS
EPSPIVSASGTPTHEEVIYASTKPALTDRIHADTDTRTNQKSNESNDNTSTASEKLISGA
GEEIGSTNQPVENGLDEAKESSPKNASTVVESGDSLNMATQTNLIGLEDKSQALANVQTP
DIVPIGNAIDSDISIVFRKESEIQKEGEPVKVSDILTKGGIVQKTVENGEVQLNKEVPSL
THNLANAHRQPHKGKKQEDKPHEAANKSTVTKMDAKQESKSITTKAKEKKKVTKQEDRPS
EGVTKNTAFKILDTKQESKTISTKSQDEKVLVLKEPPKTQKATPNTELPLQPPTSPKHPS
PLKPLPLKQASPSSWLDVEHRSKREQKRETKRRLDCSASEDESLAESDNVEDFIRNIKEL
GTPFSLPSKRHHSHPKTPSPPFALPAIKEDRFENPFDAEGFQFGLKKRTKDKVTPAMLIK
KQPHREDKTRTRQNRAEGSLLYKALQSPSRALRKPGYQTDRKDGEVEVKVEVKREVEKEE
EQGKGEETGQLSSRLGRMSILSKLLSSPKTSGKGNGDPSSSIGAPPSLTTQGTVPGRAGG
SGMDPGLLVGAACESIISPSSPPSLPSFTELKLPDHLEKCLREDKGASQSNVTQSALVST
VMDLGQGAGLPPLNMGVKGLTLGHLSTNNHPPQAALNGLLTANTKIPEARGFHKRPGKIV
LHEQAQFEGEAYDVFGDVEDASMMKLSPVISVRVIRGCWLLYEKPGFQGRTIALEEGPME
LVNVWAEEVTSGALDQMDQPVPTSPMIIGSIRLAVRDYSLPQIDLYTEVNGLGRMSSFCD
DSIEICSYGNIQNTGSIKVHSGVWLVYSDPGFGGLLAVLEVGEYPCPEAWGFPQPFIGSL
KPLKMGGIKVEHSNDVKALVFERPCFEGECVEIDDDMYDFREGGDEEDGEEEEEEEGNPV
KRKTLCSVGSLKILRGLWVGYDEPDFEGHQYLLEEGEYPDWREWGGYRDQLLSLRPVCSD
FLSPHVKLFSERDFGERGVHMDLLGPVTNMEDTCCGPKTQSINVQGGVWVAFENPMFSGE
LYILEKGLYGSPEDWGGQNLKISSLQPVFQDNLGGSKFKVQLFSEPGFQGRVVVLEDSVV
SLEEDFSPRSCRVLAGSWVAYEGSQFTEHMFVLEEGDYPNTESMGCLGPDSTIRSIQTIS
HEFSLPSITLFSKVGCRGRRVVLTGETVNLQLAGVDRRIHSLVIHGGIWVLYEDSNHRGR
QILLPPSELNDWCKFSSWPRIGSMRPLLQKQVYFRLRSRETGDVMSLSGPLDEIKLLRVQ
ALEESGGVDQTWIYHDGVLRCKLVEDCCLQTSGSIIMAGSRLSVSPPEPGINNQLWSITP
DGLVRCHLKPDLVLEIKGGQSYDKTQVILNTFDERKHTQRWSLEIL
NT seq
7881 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatctggaacatttaaaataaataatttgtttcataaaacaaagtcactggat
aaagtaaacaaggacggaggaaagaatacatttatagatgcaacttcatatgtagatgga
gagccttcaagccctttgcggtcgagtcgcggacttgtcagccccaaagatgggacgttt
cccggtgatattctacctacaagcccgccaagcgaggagaaaaagaagaagaaacggttc
ctgtcctttaggctcaagaagaaacgctccaaggactcagggagcatcgacgaccaattg
ttctgtaccggtgccgacgagctcgacagcttcagcagtaacatgagttttgatcagctg
agtgtgtcgacagagtacagcgtcaacagcaccaggacggagagagacagggatgcaacc
tccatgttcagcttcgacatgtcagccttcaacagcctcagccccaccaagtccagaaat
aagagctcggacggaatgcttaaccgcatcagcagtttattttccaccaagaagaagaag
agccggagtggttcactctcagtaggctcagaggatggatcctggctgggtcctggctct
cccaactctcccccgtcccctggttctcctctctccccccaccagaaggacgggctgagg
accaccactacccagaaagagggagaggtagtggaagcgggagctgggccagtgctggag
agtctgtcggagctccaagcgaaggggtcagtgttcagtagcagcaccagacctagtaca
tccagcctagcctctctgttggaggcggacacaggggacctgccgtttgcagacagtgac
agcagcgcccggggcagcgtgagggaggtgcaggtgtgcagggtcagccgggcggaagca
gagtcagacggagaggcagacaggaattctgggaatctgactcccacgaacgtgttcccc
tccggagcggagcaagccccagagctcggcctcactaaggacgtggtggaggaggtgaac
aggaggctgcaggtatatctgaaggaacaaagcactgtgaaagacggagaggggtcggag
tggggcagcccagtggtccaaaccaccctcaggtcgtttgagctctctcaatctcaccta
aagactgatgtcacctctctcggcatcgagtctaaaaagacctctctgaaaacatctgtt
ggagggaaggggagttacctgctgggagtgactctagcctctcagtctcacaccccgtcc
tcctcagacccacagccagagggtgaggagggagagaacagcccagccatggggaagaag
aacaggagaagggctcggaaacccaccagcgtcagctcggctgagactgctccccccagc
cagatgacgttacctgggggagaggggacgaggcgggactcacctgcgaagctacacaaa
cctgtgtcggtggaaacacacctgggagaagagcccatacctgtgtctgtggcccctgtg
gtgtacactgatactgccggtgtcctggccactgtaaccctttcagcggtatccggtggc
agagagccagagctggctgtatccacagcaccagtctccaaggactccgaaacaaacaaa
gcccggccagaggagaccagtccagccacagactccgagtgcagcccccctctagaggat
cagacggccctgagcaaagaggaaaagcgcaggagtgtgaaactgtcccacagtgagaag
cttttcactaagaaggtgtatgtgagccctgagcccagttttgatggggatgagcagaca
gagagagagctggaaaataatgacatcgtagacttggcttcaaagattcctcagaagtct
gaggtgaaactgctgccaagcctcaaaaaggtgaatgtaaatctcaaggaaccaaacaat
gactgtatcatctctgtgggagagataactgagggtacagactttgacctaagccaccat
gagcccaaggctgtagacagttccccaaccccagatctggatgaggcctctccaaccaca
accatgccaggacgcaaaacacagcctaacactgggggttcaggggttagaggtcagggg
atgccccaggtcaccccgtctaaaccaggggataaagtaggacatgtagccagtcggtta
aagagcccatctccttctgttggacccaagtccaaagctggcctggacatggctaaggga
aaggttctcacagatggtggaaagtcgggggtttctagtggggctccatcgcaaaggaca
actaaagatggcggggagaaaacagaggttatgccgtctacatcaaagggtcaactcact
gcagaaaaaacagaggtcaccgacagccccaagtcgagaatccccaaaaagtcattatca
gaatctgcattgaaacccccagtatcaccagacacaacctcagtggttgatgtttcagag
gttgtgcctgtggctggttccaaacaacagaaaactcctgaacctaaacatttaatgatg
aaaacaggcacaaagcctattgttgaagaggtgaagggagtgggttcaggagaaaaacaa
acttctgcgcctgttaagtcagaagaggtctcacctactaaagtaccactcatgtcacct
gtgaagttcagcaaagataagagcaaagatagttcagataaggttaacctggtcaatgga
ctggagaaagacccagaggacaacactaccactgccaaaacaagtgaacccaaagatgtg
aaaaaacagactcccacacacccagacagcaacaacagcagcatgataccaaagagtcgg
ttacccaaagcccctgacaactcttcggtcagaaaggcgaaaaatggtaaactccaaacc
atcgacacaggcagtaaaaagaccaaaaccactgagagagcatcaggtgtcagtagttgg
ccttccacaccaaccagtccaaagcagcaggagcttcccagcccagaggaaaggcccaca
gatgagaccctgatccctgaacctgagaagggaagcaagctgccttgccctttgccaaca
aacttgccccaacagctctccaataagagcactccacatgacgatggtgacacacccacc
tctcccgcactggtaccaacaaagtcagagaaacctgccttccttagactgaagaagcag
agtaacatcacatctcccatcatgaacaagactgctgaggatgctgggagtttgaaaagt
ccagtgaaagatccaagtgattctgtaactgtggctagcaagcttccgatgttccgtcag
aaaaccccgcctaaaggaaaacgcagcaaaccccttaagaaatttgagcaaactgtgaac
tctgaaacactatctgaaacacaatctacaccagtacaagatcatgtgtcgctgatcaca
gataactctcagatagaagatcaacaaaccaaaccagcaacaggctcctcactagtagca
gactgtagcactgagcttgtaaaatatcaaacaaataaaccagcaatcactggaacgaag
gaatcactgaaggacagcagtagtagtacacctgtaacaaaactggatgcaaaatcggaa
attgcacaagaaaaatccctgtcagtcagaactacctctgttacacagaaacatcaaacc
aaaccacccccagatctctcatcagagattgaccgtgactatgtggaagccttaacagat
acaccacagctgctgacaggtaatgtagagccaggtgtcgttgtggagaaacgcccatct
gaaccaagccccattgtgtctgcctcaggcacacctacccatgaggaagtaatatatgca
tctaccaagcctgcattgactgaccgcattcatgctgacactgacacccgaaccaatcag
aagagtaatgagagcaatgacaatacctctacagcatcagagaagctcatatctggtgct
ggagaggaaataggtagtacaaatcagcctgtggaaaatggcctggatgaagctaaggaa
agctcacccaaaaatgcctccactgtggttgaaagtggagatagtctcaatatggcaaca
cagacaaatctgattggcttggaggacaaatcacaggcactagctaatgttcaaacccca
gatatagtacctattggtaatgccatagattctgatatatccatagtttttaggaaagag
agtgaaatacagaaggagggagagccagtgaaggtctcagacattctaacaaagggtggg
attgttcagaaaacagttgaaaatggagaggtccaactgaacaaagaggttccttcactg
acacataatttggcaaatgcacataggcagccacacaaaggaaagaaacaagaggacaaa
ccccatgaggcagccaataagagtaccgtaactaagatggatgcaaaacaggaatcaaag
tccataaccacaaaggctaaggaaaagaagaaggtgacaaaacaagaagatagaccaagt
gaaggagtgactaaaaacacagcctttaagatattagacacaaaacaggaatcaaaaacc
ataagcacaaaatctcaggatgagaaggtattggtcctcaaagaaccccctaaaactcaa
aaagcaacccccaatactgaactgcctcttcagccgccaacttctccgaagcacccctct
ccccttaaacctctccctttgaaacaggcctctccctccagctggttagatgtggagcac
agatccaagcgggagcagaagagggagaccaagaggaggctggactgttcagccagcgag
gatgagagtctggctgagtctgacaatgtggaggacttcatcaggaacataaaggaactg
ggcacccccttttccctgccctccaagaggcaccacagtcatcccaagaccccctcaccc
ccctttgctctgcccgccatcaaggaggaccgcttcgagaacccctttgatgctgagggc
tttcagtttggcctgaagaagaggacgaaggataaagtaaccccggccatgttgataaag
aaacagcctcacagggaggacaagacacggacaagacagaatagagcagagggtagcctt
ctctacaaagctctccagtctccatctagagccctgagaaaaccagggtatcaaacagac
aggaaagatggagaggtggaagtgaaggtagaagtgaagagggaggtagagaaggaagag
gagcaagggaaaggagaagaaaccgggcagctctcgtcgcggcttggaaggatgtccata
ctgtccaaattgttgagttcccccaagacttccggaaagggcaacggggatccttcctcc
tcaattggtgctcctccttctcttacaacccagggcacagtgccaggaagggcgggcggg
agcggtatggatccaggcctgcttgtgggtgcagcttgtgagtcaataatcagtccctct
tcacctccttctttgccctcattcactgagctaaagctaccagatcacctggagaaatgt
ctcagggaagacaaaggagcttcacagagtaatgttacacagagtgctttggttagtact
gtaatggacctaggtcagggtgctggacttcctcctctgaatatgggcgtaaagggactt
acgttaggacatctttcaaccaataaccatcccccacaggccgctctgaatggtcttctt
acagccaacacaaagattccagaagcgagagggtttcataaacggcctgggaagatagtg
ctccatgagcaggctcagtttgaaggagaggcctacgatgtgtttggtgacgtggaggat
gcctccatgatgaagctgtctcctgtcatctcagtcagggtcatcaggggatgctggctg
ctatatgagaagccagggttccaggggcggaccatcgccttggaggagggccccatggag
ctggtcaacgtgtgggcagaggaggtgacatcaggggcactggaccagatggatcagcct
gtcccaacttcacccatgatcatcggatccatccgcctggcagtgagggactacagttta
cctcagattgacctgtacactgaggtgaatggtctggggaggatgtcatcattctgtgac
gactccattgagatctgttcctatgggaacatacagaacaccggctccatcaaggtccac
tctggagtctggctggtgtatagtgacccagggtttgggggtctgctagcggtgttggag
gtgggagagtatccctgtccagaggcctggggattccctcagccattcatcggatctctg
aaacccctcaaaatgggtgggataaaggtggagcattctaatgacgtaaaggctctggtg
ttcgagaggccgtgctttgagggcgagtgtgtggagattgacgatgatatgtacgacttc
agagagggaggagatgaggaagatggggaggaggaggaggaggaagaagggaatccagtc
aaaaggaagacattgtgttctgtgggatccctcaagatccttagaggactctgggtgggc
tatgatgagccagactttgagggtcaccagtatctcctggaggagggggagtaccctgac
tggagggagtggggaggctacagagaccagctcctgtcactgcgccctgtatgctctgac
ttcctgtctccccatgtgaagctgttcagtgagagggactttggggagagaggggtccac
atggacctgctggggcctgtcactaacatggaggacacctgctgcggccccaagacgcag
tccatcaatgtccagggtggagtgtgggttgcctttgagaacccaatgttctccggagag
ctctacattctagagaaaggcctctacggaagcccagaggactggggaggacagaacctc
aagatctcctcgctgcaacccgttttccaggataacctgggtggaagcaagttcaaggtc
cagctgttctcagagcctgggttccagggcagagtggtggtactggaggacagtgtggta
tccctggaggaagacttctcccctcgctcctgtagagtactggctgggagctgggtggca
tatgagggatcccagttcacagagcacatgtttgtcctggaggagggagattaccccaac
actgagtcaatgggctgtctgggtcctgactctaccatccgctccatacagaccatcagc
catgagttctccctcccgtccataacgctgttcagtaaggttggctgtagaggccgtagg
gtggtgctgacgggagagacggtgaacctgcagctggctggggttgacagacgcatacac
tccctggtgatccacggaggaatttgggtgttgtatgaggatagtaaccaccggggccgt
cagatcctgctaccgccaagcgaactgaatgattggtgtaagttcagcagctggccgcga
atcggatccatgcgaccactattgcagaagcaggtgtacttccgtttgcggagcagagag
acgggcgatgtgatgtccctgtcagggcctctggatgaaatcaagcttttgagggtccag
gccctggaggagtcagggggagtggaccagacctggatctaccatgacggagtcctacgc
tgcaagctggtggaggactgttgcctgcagacatcagggagcattatcatggcgggcagc
aggctgagtgtgtctcctccggagccagggataaacaaccagctgtggagcattacccca
gacggcctggtccgatgccacctcaaacctgacctggtgctggagattaaaggtggacaa
agttatgacaaaactcaagtgattctcaatacatttgatgagagaaaacacacccaaaga
tggtctttggagatcctgtaa
DBGET
integrated database retrieval system
