Oncorhynchus tshawytscha (Chinook salmon): 112256544
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Entry
112256544 CDS
T05605
Name
(RefSeq) sorting and assembly machinery component 50 homolog B
KO
K07277
outer membrane protein insertion porin family
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
112256544
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
otw03029
]
112256544
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112256544
Mitochondrial biogenesis [BR:
otw03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
112256544
Transporters [BR:
otw02000
]
Other transporters
Pores ion channels [TC:
1
]
112256544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
Motif
Other DBs
NCBI-GeneID:
112256544
NCBI-ProteinID:
XP_024285632
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All DBs
Position
LG17:complement(13972367..13977799)
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AA seq
470 aa
AA seq
DB search
MGTVHARSMDPLPMHGRDMGVHPDDMIEVQEAEQETKQEVLENKDVVVQHVNIEGLGRTK
EDLLGYEISEVFHAKNLVDVMKKSHIARQKLLRLGIFKEVEVVIDTSDGADALPNGLDVT
FEVTEMKRLTGSYNTMVGNNEGSMVLGVKLPNVFGRAEKLTFQFSYGTKETSYGLSFFKP
QPGNFERNLALNLYKVTGQFPWSSLKETDRGVSTELNFPLWRTNHTLKWEGVWRELGCLA
RSASFAVREESGHTLKSALSHTMSIDNRNSAIFPKKGALLRINQELAGYTGGDASFLKED
FELQVNRRLVWDSVLSASLWGGCLLPIGGRPSSIADRFYLGGPTSVRGFGMYSIGPQSEG
DYLGGEAYWAGGLHLYTPLPFRPGRAGFGDLFRTHFFLNAGNLCNLNYGEGPRAHLQRLA
ECIRWSYGAGIVLRLGNIARLELNYCIPMGVQSGDRICDGVQFGAGIRFL
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggggactgtccacgccaggagtatggaccctctcccaatgcacgggcgtgacatgggc
gttcatcccgacgacatgattgaggtgcaggaggcagaacaagagactaaacaggaggtc
ctggaaaacaaagacgttgttgtccaacatgtcaacattgagggcttgggcagaaccaaa
gaggatctgctgggctatgaaatctctgaggtcttccatgctaaaaaccttgttgatgtc
atgaagaagtctcatattgccagacagaaactgctgcgtctgggcatcttcaaagaggtg
gaggttgtcatagatacatcagatggtgcggatgcgttgcccaatggtctggatgtgacg
ttcgaggtgacagagatgaagaggctgacgggcagctacaacaccatggtcggcaacaac
gagggcagcatggtgttgggtgtgaagcttcctaacgtgtttggccgtgcagagaagtta
accttccagttttcctatgggaccaaggagacttcctacggcctgtccttcttcaagccc
cagccaggcaacttcgaacgcaacctcgctctaaacctgtacaaagtcacaggccagttt
ccatggagctccctcaaagagacagacagaggagtctccactgagctcaattttcctctg
tggaggaccaaccacactctgaagtgggagggtgtgtggcgggagctgggctgtctggca
cgcagtgcctccttcgccgtgcgagaagagagcggacacaccctcaagtctgccctctcg
cacaccatgtccattgacaacaggaactctgccatcttccccaagaaaggtgccttactg
aggatcaaccaggagctggctggctatacaggcggagacgcaagcttcctgaaggaggac
tttgagctgcaggtcaacagacggctggtctgggactcggtcctctccgcctccctctgg
ggtgggtgtctcctccccatcggagggagaccgtcctccatcgctgacaggttctatctg
ggcggtcccaccagtgtgcgaggatttggaatgtacagcatcggcccacagagcgagggt
gactacctgggaggagaggcgtactgggcaggcgggctccacctgtacactcctctaccc
ttccgtccgggccgggccggcttcggagacctcttcaggacacacttcttcctcaacgct
gggaacctgtgcaacctcaactacggagagggtccaagagcacacctacagaggctggcg
gagtgtatccgctggtcgtatggagcaggcatcgtgttgcgtctcgggaacatcgccagg
ctggagctcaactactgcattcccatgggggttcagagtggagacaggatatgcgacggc
gtccagtttggagcaggaatccgcttcctgtga
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