Oncorhynchus tshawytscha (Chinook salmon): 112256555
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Entry
112256555 CDS
T05605
Symbol
trappc12
Name
(RefSeq) trafficking protein particle complex subunit 12
KO
K20309
trafficking protein particle complex subunit 12
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112256555 (trappc12)
Membrane trafficking [BR:
otw04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
112256555 (trappc12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_1
TPR_12
TPR_16
TPR_8
TPR_6
TPR_17
ANAPC3
Coatomer_E
TPR_11
RPN7
TPR_10
TPR_9
Motif
Other DBs
NCBI-GeneID:
112256555
NCBI-ProteinID:
XP_042181403
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All DBs
Position
LG08:complement(35495852..35513760)
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AA seq
833 aa
AA seq
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MDNNETPAQRPVTLDITGAVEVKPSLSEAPISPLPSLLPSSDVHFQEESIDLGGESFITP
EEDSHSTPSESLMDKLNDQMMESVMISDSPNNSEEDDVVPMDNLLEQFEEREEEPAAAVF
KETLVEEEEEVEEKMDDLIGQDTTEIKIEAAMMQTSPVASSPEEPENVKQKLTTDDQDVI
TVSVSAVTPEDSTPSSGSPKPEAAALEASSKETTSKDESIPVCTIFSQGSQPKAQALVPD
GFQPTLIKSPSFSSSTGGSTEITPSQLAPLVCQPSPSLSKFFSDSGHVNPATDFFDSFTT
SSFISISNPNAESPKSAAPPERQLSASSGSSLSTSGLTESGILTPSSFIGPTQTEATPRP
LQQAPVEPAPATAPPQPFTQLQAVFSGGDDPFATALNMSEADKRYDAWLPSEETRKVLIS
MATQHYSQVFVERERLAMPGLKFDNLQGDAVKDLMVRLMGEQAAMKRQVLTANSVEQSFL
GLKQLISTKNWRAAVDLTGRLLTAHGQGYGKAGQPSSHNTDSLQLWFVRLALLTKLSLFQ
NAEMELEPFGNLDQPDLYYEYYPTVYPGRRGSMVPFSMRVLHAELPQYLGKPQESLDRLH
SMRTVCQTILDNLEQGLAEDGSMINLTQENRQASLQLWKSRLSRVMYAMANCLLMMKDYV
LAVETYHSIVQYEPQQKVQLLSGIGRIFLQIGDIKTAEKYFLDVEKASLEKGSGTIDTCV
LMNRAFIYLSQNNYSEAHSSFAEVLKIDPKNPVANNNAAVCLLYLGRLKESLRQLEGLVQ
QDPALYLHESVLFNLTTMYELESSRSTQKKQALLESVACREGDSFNTQCLKLV
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggacaacaatgagactcctgcccagaggccagtcactcttgacatcacaggggcagtg
gaggttaaaccaagcctgagtgaagcccctatctcccctctgccatccctccttccctcc
tctgatgtccatttccaggaggagagcatcgacctggggggcgagtctttcatcactccc
gaggaggacagccacagcacgccctcagagagcctgatggacaagctcaatgaccagatg
atggagagtgtcatgatctctgactcccccaacaacagtgaggaggatgatgtggttccc
atggacaacctgctggagcagtttgaggagagggaggaggagccagcagcagcagtgttt
aaagaaaccttagtggaggaagaggaggaggtggaggagaaaatggatgatctgattgga
caagacactactgagatcaagatagaggcagcgatgatgcagacaagtccagtagcctct
agtcctgaggaaccagagaatgtgaaacagaagctaaccactgatgaccaggacgttatc
actgtctctgtctctgctgtaaccccagaggacagcacccccagctcaggcagccccaag
cctgaggcagcagccctggaagccagcagcaaagagaccacatccaaggatgaatccatc
cctgtgtgcaccatattcagccagggcagccagccaaaagcccaggccctggtgccggat
ggcttccagcctaccctcattaaatctcccagcttcagtagtagcaccggggggagcaca
gagattacccccagtcaactggctcccctggtctgccagcccagccccagcctcagcaag
tttttctctgacagtggccatgtcaacccggctactgacttctttgactccttcactact
tcctccttcatctctatcagcaaccccaacgcagagtccccaaagtcagccgccccaccc
gaacgccagctctctgcttcctctgggtcctctctgtccacctctgggcttacggagtcc
ggcatcctcacccctagctccttcattgggcctacccagactgaagccacccccaggcct
cttcaacaggctccagtagagccagccccggccacagcccctcctcagccattcacgcag
ctgcaggctgtgttctcggggggagatgacccgtttgccacggcactgaacatgagtgag
gctgataagaggtacgatgcctggctgccttctgaggagaccaggaaggtgctgatctcc
atggcaacgcagcactacagccaggtgtttgtggagagggagagactggccatgcccgga
ctcaagtttgacaacctgcagggtgatgctgtgaaggatctgatggtgcgtttaatgggg
gagcaggcggctatgaagagacaggtccttacagcgaactctgtagaacagtccttcctg
ggcctcaaacaactcattagcacgaagaactggcgtgctgcggtggacctgacaggcaga
ctgctgacagctcatggtcagggctacggtaaggctggccagccttccagccacaacact
gactcactacagctgtggtttgttcgcctggccctgctcaccaagctgagcctgttccag
aacgctgagatggaactggagccgtttggaaacctggaccaacctgacctctactatgaa
tactatcctaccgtataccctgggaggagaggctccatggttccgttctcgatgcgggtg
ctgcatgcagagctgcctcagtacctggggaaaccacaggagtctctggacagactacac
agcatgaggaccgtctgtcagaccatcctggataaccttgagcagggcttggctgaggac
ggcagcatgatcaacctcacccaggagaacagacaagcatctcttcagctgtggaagtct
cgtctgagtcgggtcatgtacgccatggcgaactgtctgctcatgatgaaggactatgtt
ctggctgtagagacatatcactccatcgtccagtatgagcctcagcagaaagtacagctg
ctgagtgggataggacgcatattcctgcagattggagacattaaaacagccgagaagtat
ttcctagatgtggagaaagcctctctggagaagggaagtggaactatagacacatgcgtt
ttgatgaacagggccttcatctacctcagtcagaacaactactcagaggcacactcctcg
ttcgcagaggtcctaaagatcgaccccaaaaaccctgtggcgaataacaatgcagcagtg
tgcctgttgtacctgggccgtctgaaggagtcgctgagacagctggagggcctggtgcaa
caggacccggccctgtacctccatgagagcgtccttttcaacctgaccaccatgtacgag
ctggagtcgtcccgctccacccagaagaaacaggccctgctggagtcagtggcctgccga
gagggagacagcttcaacacacagtgcctcaaactggtgtag
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