Oncorhynchus tshawytscha (Chinook salmon): 112256566
Help
Entry
112256566 CDS
T05605
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like isoform X2
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112256566
03036 Chromosome and associated proteins [BR:
otw03036
]
112256566
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
112256566
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
112256566
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
ARM_At3g06530
Beta-prop_RSE1_2nd
EutN_CcmL
DUF4294
Motif
Other DBs
NCBI-GeneID:
112256566
NCBI-ProteinID:
XP_024285656
LinkDB
All DBs
Position
LG08:complement(34743779..34843145)
Genome browser
AA seq
1458 aa
AA seq
DB search
MDIMEDFPLPPPEMLVDDVPYADEEEGEQFEFDDSGDEVPEADRLPPAPLAPDYGAQANG
VAPHPEPEGADPEHHLEGQPSNPDPPAATATVDPTTATVAASLPVPATMATTDTAVVAAA
EGEKASAVPVPADKDSDLPLPPPSEDSSPVGTDSVDKEVSSDDPPPANPRTTSQKKVNPY
SVIDITPVQLQQLEQQHGLAPSSPVERVGGEEGDGQDVSPTSPPCVPPGYSVPVPCGYAT
PSGVPLITPAYTTPIIIRHFSLDEDVTVVATCNTSVDSVFSEEYPAIREEDALSKWVSDP
ANTAWMENPDEVIYDDVPRENSDSTTEPDEMIYDDVEFGEEGCGSSLDNGWSSSEFESYD
EQSDGEGQGENGLPDAFMRGKTPQKKTTHLSQDLTRLKEHYEKKMKDLMANTVGAVVLQQ
IKQEHEPKMQKLVKAARDGTKDGLEKTKAVVKRGRSFIKTKTHCHERKSTCFEGEESELF
IEVDCFNMEPVLSPVPEGLSQQQVVRRCILGSILESEKNYLDALKRILEQYEKPLSEIEP
RLLSDRKLKMTFYRIREILQCHALFQIALACRVAEWDSLEMIGDVFVASFSKSMVLDAYC
EFVNNFSTAMAVVRKTCASKPSFLDFLKHRQDTSSDRVTLYGLMMKPIQRFPQFILLLQD
MLRNTPVGHSDRLHLQMALTELETLAEKLNEKKRDADQRCEIRHIAKAMNERYLNKLLSN
DSRYLIRSDDMVETVYNDRGEVIKTKERRLFLLNDVLMCATPNVRCSVDGSGSGNVPPGQ
KFLLKWSVPLSFVGVVEFGSSEDMGDNCRFTPQPHSGEKVVVNAKPNKLYMGPGQLYQDL
QNLIHDLSLVNQISSMIGSLKGNYQNVNPTVAHDWVSGLQRLILKKEEEIRAADRCRIQL
QLPGKQDKSGRATYFPAVFNTFSPAIKQSWISNLQMAKLALEEDNLQGWFFAEDDGNQIK
KQKHPLLLRQMPVVMSKLQEFKVECAVHNPEPHISIGSTADTPALGHGCVWVASCTNQMG
QIAIVAMQNSSPKVTECFNVESRILCMAYVPMEQSTQENRMGNPENNLSLVGKASDNPTV
CLGMEEGSIIVYKSSQQSKKVRLQHFFILDKSTVTSLVHQKQCLYAGLVSGSVAIYSRAQ
DGLWNPDSPKVLKLGVLPVKAMLAVEGHVWASSGGQVFIISTNLHTVERQLEAHQEEGMV
VSHMVVAGVGIWIAFSSGSTLRLFHTETLEPLQDINVATPVHNILAGNQRVSVSSLLVCH
GLLLVGTNLGVTVALSVPRLQGIPKVTGRGMVSFHAHHGPVKFLTMAAAVCNRPSGNSDS
PGSSPPSQPGDTQDGEASPPPPPGSTPSPAATQGRGVWLGEAGCSSMALHDSLSSSCGSL
ALSQGSLEHGPEDGAIYDLVNDPANHQRGRRVKKVDVSSLLVVSGGLGHRRVNRKSKQSR
QEETVSTIMVWQIPLLNM
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atggacatcatggaagacttccctctcccacctcctgaaatgttggtggacgatgtgccc
tatgcagatgaagaagagggggagcagtttgaatttgatgacagtggggatgaggtccct
gaggcagaccggctgccccccgcccctctggcccctgactacggggcccaggccaatggt
gtggccccccacccagagccagaaggagcagaccctgaacaccacctagaggggcagccc
tcaaacccagaccccccagcagcgacagcgactgtggacccaactactgctacagttgcc
gcatcacttccagttccagctaccatggccacaacagacacagcagttgtggctgcagca
gaaggggaaaaggcttcagcagtcccagtcccagctgacaaagacagtgacctacccctt
cctccaccttcagaggactcctctcctgtaggaacagactctgttgataaggaagtgtcc
agcgatgaccctcccccagccaaccctaggaccacctcccagaagaaagtcaacccctac
tctgtgattgacatcacccccgtccaactacaacagctggagcagcagcatgggcttgcc
ccttcctcacctgttgagagggtgggaggagaggagggggatggacaggatgtgtcaccc
accagccccccctgtgtccccccgggttactctgtgcctgtgccctgtggatacgccacc
ccctctggcgtgccccttatcacgccagcctacaccacgcccatcatcatccgacacttc
tctctggacgaggatgttactgtggtggcgacatgcaacacttctgtagacagtgtcttt
agtgaagagtatcctgccatcagggaggaggatgctttgtccaaatgggtgtcggaccct
gcaaacacagcctggatggaaaatccagatgaagtaatttatgatgacgtgcccagagaa
aactctgattcaactacagagccagatgagatgatctatgacgatgtggagtttggggag
gagggctgtggcagctccctagacaacggttggagctccagcgagtttgagagctacgac
gagcagagtgacggtgagggccagggggagaacggcctgcctgatgccttcatgagaggg
aagacaccgcagaagaagaccacccatctttctcaagatctgacacgcttgaaagaacac
tatgagaaaaagatgaaagatcttatggcaaatacagtgggagcggtagtgctgcagcag
attaaacaggaacacgagccgaagatgcagaagctggtgaaggcagcgagagacgggacc
aaagacggcctggagaagaccaaagcagtggtgaaaaggggacggtcgttcatcaagacc
aaaacccactgtcatgagaggaagtcgacctgttttgagggtgaggagtccgagctcttc
atcgaggtggactgcttcaacatggagccagtgctcagtcccgtccctgagggtctctca
caacaacaggtggtgaggaggtgtatactgggctccatattagagagtgagaagaactat
ctggatgcactgaagcggattttagagcaatatgaaaagccactttcagagattgagccc
aggttgctaagcgacaggaagctcaagatgacgttctatcgcattcgggagattctccag
tgccacgccctgttccagatcgccctggcatgccgcgtggccgagtgggacagtctggaa
atgattggggacgtctttgttgcctcgttctccaagtccatggtgctggacgcctactgt
gagtttgtgaacaacttcagtacggccatggcggtggtcaggaagacgtgtgcctccaaa
cccagcttcctggacttcctcaagcatcgtcaggataccagcagtgaccgggtcactctc
tatggactcatgatgaagcccatccagaggttccctcagttcattttgctgctgcaggac
atgctgagaaacaccccagtaggccacagtgacagactacacctacagatggccctgaca
gagctggaaaccctggctgagaagctcaacgagaagaagcgggacgctgaccagcgctgc
gagatcagacacatagccaaggccatgaacgaacgctacctcaacaagctcctgagcaac
gacagccgttacctgattcgctcagacgacatggtggagacagtctacaacgaccgcggt
gaggtcatcaagaccaaggagcgacgcctttttcttctcaacgacgtgctcatgtgtgcc
acgcccaacgtccggtgcagtgtggatggtagtggtagtggcaacgtccccccgggccag
aagttcctgctgaagtggagtgtccctctgagctttgtgggtgtggtagagtttggttcc
agtgaggacatgggcgacaactgccgcttcaccccacaaccccactctggagagaaggtg
gttgtcaacgccaagccaaataagctgtacatgggtccaggccagctgtaccaggacctg
cagaacctcattcacgacctcagcctggtcaaccagatctccagcatgatcggtagcctc
aagggaaactaccagaacgttaaccctacggtggcccatgactgggtgtcgggtctgcag
cgtctcattctgaagaaggaggaggagatccgggctgcagatcgctgtaggatccagctg
cagctgcctggcaaacaggacaagtctggcagggccacatactttcctgctgtgttcaat
accttctctccagccatcaaacagtcctggatcagtaacctgcagatggccaagctggct
ctggaggaggacaatctgcagggctggttctttgcggaggatgatggtaaccagatcaag
aagcagaaacatcctctcctgctcaggcagatgcctgtggtcatgtccaaactacaggag
ttcaaggtggagtgtgcggtccataaccccgagccccacatcagcatagggagcacagca
gacacacctgcactcggacacggctgtgtgtgggtggcgagctgcaccaaccagatgggt
cagatagccatcgtggccatgcagaactccagccccaaggtgacagagtgtttcaatgtg
gagtctcggatcctgtgcatggcttatgtacccatggagcagagtacccaggagaatagg
atggggaaccccgaaaataacctctccttagtggggaaggccagtgacaaccctactgtc
tgcctgggcatggaggagggcagtatcatagtctataagagcagccagcagtccaagaag
gtgcgtctccaacacttcttcatcctcgacaagtccaccgtgaccagcctggtgcaccag
aagcagtgtttatacgctggccttgtgagtggctcagttgccatctactccagagcacaa
gatggcttgtggaatccagactctcctaaggtgctgaagcttggggttctgccagtgaag
gccatgctagctgtggagggccacgtctgggcttcctctggaggacaagtcttcatcatt
agcactaacctgcacactgtggagaggcagttggaggcccaccaggaggaaggcatggtt
gtatcccacatggtggtggctggggtgggtatctggatagccttcagctctgggtccacc
ctcagactgttccacacggagaccctggagcctctacaggacatcaacgtcgctacgcct
gtacacaacatactggctggaaaccagagggtctctgtgagcagtctgctggtatgtcat
ggtctgctgctggtggggaccaacctgggggtgacagtggccctctctgtccctcgacta
cagggcatccctaaggtcacaggacggggcatggtatctttccatgcacaccacggccca
gtgaagttcctcaccatggcagccgccgtgtgcaaccggccctcaggcaactcagacagc
ccaggcagcagcccacccagccagccaggggacacccaggacggggaggcctccccacct
ccacccccaggctccacacccagtcctgctgctactcagggccggggagtgtggctgggg
gaggcaggctgctcctccatggccctccatgactccctgtcctcctcctgtggctccctg
gctctgtcacagggctctctggagcacgggcctgaggacggggccatctatgacctggtc
aatgacccagccaatcaccagaggggcaggagggtcaagaaggtggacgtcagctctctg
cttgtggtgtcgggggggctgggtcaccgcagggtcaacaggaagagcaaacagtcccgc
caggaggagactgtgtccaccattatggtgtggcagatccctcttctcaacatgtaa
DBGET
integrated database retrieval system
