Oncorhynchus tshawytscha (Chinook salmon): 112256607
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Entry
112256607 CDS
T05605
Name
(RefSeq) pre-mRNA-splicing factor syf2
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112256607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112256607
Spliceosome [BR:
otw03041
]
Complex B
Other components
Prp19-related factors
112256607
Complex C
112256607
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
AAR2_1st
Motif
Other DBs
NCBI-GeneID:
112256607
NCBI-ProteinID:
XP_024285718
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All DBs
Position
LG08:complement(32683904..32695489)
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AA seq
237 aa
AA seq
DB search
MASCAAGSAAVSYEPTESTASQKREERLRKFRELHFKRNEARKLNHKEVVEEDKRLKLPT
NWEAKKARLEWELMTDEKKKECAAKGEDYDRVKLLEISAEDAERWERKKKKKNPDPGFSG
YAEAQLRQYQRLTKQIKPDMDGYERQREQCGEDFHPTSNSLIHGTHVPSKEGIDRMVEDV
EKQIEKRAKYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYTAEIKQNLERGTAV
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctgcgctgcgggatctgctgcggtcagttatgagccgaccgaaagtactgca
tctcagaagagagaggagagactccgaaaattccgggaactgcatttcaaaaggaatgaa
gcacgcaagctcaatcacaaggaggttgtggaggaggacaagagactgaagctgccaact
aactgggaggctaagaaagcccgtctggagtgggaactcatgaccgatgaaaagaaaaag
gagtgtgcggccaaaggggaggactatgacagggtgaaactgctagagatcagtgctgag
gatgctgagcggtgggagagaaagaagaagaagaagaaccctgacccaggattctcaggt
tacgcggaggcccagctgcgacagtaccagcgcctcaccaagcagatcaaaccagacatg
gacggctacgagaggcagcgagagcagtgcggcgaggatttccaccccacatccaacagt
ctgatccatgggacccacgtcccttccaaggagggcatcgaccgcatggtggaggatgtg
gagaaacagatcgagaagcgggccaaatacagccggcgtagggcctacaacgatgacgca
gacattgactacatcaacgagaggaacgccaagttcaacaagaaggcagagcggttctat
ggcaaatacacagctgagatcaagcagaatctggagagaggcacagcagtctaa
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