Oncorhynchus tshawytscha (Chinook salmon): 112256637
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Entry
112256637 CDS
T05605
Name
(RefSeq) 5'-3' exonuclease PLD4 isoform X1
KO
K16860
phospholipase D3/4 [EC:
3.1.4.4
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00564
Glycerophospholipid metabolism
otw00565
Ether lipid metabolism
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
112256637
00565 Ether lipid metabolism
112256637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112256637
Enzymes [BR:
otw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
112256637
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
112256637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLDc_3
PLDc_2
PLDc
P116
Motif
Other DBs
NCBI-GeneID:
112256637
NCBI-ProteinID:
XP_024285790
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All DBs
Position
LG08:31535012..31540630
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AA seq
525 aa
AA seq
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MSYFLVSYQCLWIRGRNKSLVVDNTCFILMPGTLVPEMSSPYKTLHDSYVPNRRGSKRLV
SIAVVVGCLTALGVLLSFSILDKCTEEEHFQNDKLFQETRTDQNNISDEQSRIILVESIP
LYMKYDDNATFGTPVDKAWRDLLSMATNQVDVVSFYWTLTGDDINMNSSTDLPGKDILEQ
LGALPSRNVSVRVVTSIPSMLTNSTDLQVLRQKGVQVRKVHFGHLTGGVLHSKFWIVDRR
HIFLGSANMDWRALTQVKELGVVIYNCSSLAEDLQKIFESYWVMGHLNSSIPDPWPSKYD
TAINKEHPLLLKADNVSSQIYITGSPPSFCPTSRTQDLNAILSVISGAQHFIDVAVMEYF
PTTRFIHPQRYWPAIDDALKRAAFERNVKVRLLVSCGRDSDPAMLPFLQSLASLNYPAHN
ISIQVKLSIVPVGNQSEIPYSRVNHNKYMVTDRVAYIGTSNWSADYFNTTAGVGLVVSQH
TPNWPWGTQALQGQLRAVFDRDWHSQFTVCFADLGHHPDCALSKG
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtcatacttcttagtttcatatcagtgtctgtggattagaggaagaaacaaatccctt
gtagtagacaacacctgctttattctgatgccaggaacattagtgccagagatgtcctct
ccttacaagactttgcatgatagctatgttcccaaccgaaggggctcaaaacggcttgtg
tctatagctgtggttgtgggatgtttgactgctttgggtgtactgctctccttttctata
ttggacaagtgcacagaagaagagcatttccaaaatgacaagctcttccaagaaacaaga
acagatcaaaataacatttctgatgagcaaagccgaattatccttgtggagagcattccc
ctgtatatgaaatatgacgacaatgcaacctttgggaccccagtggacaaggcctggaga
gatctcctgtccatggcaactaaccaagtcgatgtggtttccttctactggactcttacc
ggtgatgacatcaatatgaactcttccactgacttacctggaaaggacatactggagcag
cttggagctttgccttccagaaacgtatcagtgagggttgtgacgagtattccctctatg
ctgacaaactccacagatctacaagttctgagacagaaaggagtccaagtaagaaaggtg
cactttgggcatttgactgggggtgtactccacagcaagttctggattgttgataggaga
cacatattcctaggaagtgccaacatggattggagggctcttacacaggttaaggaactg
ggagtggtgatctacaactgctccagtctggctgaagacctccaaaagatatttgagtcc
tactgggtgatgggtcatctcaacagctccatcccagacccttggccctccaaatatgac
actgccatcaacaaagagcatcccttgctgctgaaggctgataatgtttcaagccaaatc
tacattacaggttctcctccctctttctgcccaacatctcggactcaggacctgaatgcc
atcctctcagtgatatcaggggcgcagcacttcattgatgtggcagtcatggagtatttt
cccaccacacgcttcatacaccctcaaaggtactggccggccattgatgatgcattaaag
agagctgcttttgagcggaatgttaaggtccgtctgctggtcagctgtggacgtgattct
gatccagccatgctacctttccttcagtctctagcctccctgaattaccctgcccataac
atcagcattcaagtgaaactgtccattgtgccagtagggaaccagtcagagattccctac
tccagagtaaaccataataaatacatggtgactgatagagtggcatatattgggacgtct
aactggtctgctgactacttcaacaccacagctggagtggggctggtggtttcccaacac
acaccaaactggccctgggggacccaggctctgcaggggcagctcagagcagtttttgac
agggactggcactctcaatttactgtatgttttgctgacttgggccatcaccctgattgt
gcactctcaaaaggatag
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