Oncorhynchus tshawytscha (Chinook salmon): 112256679
Help
Entry
112256679 CDS
T05605
Symbol
exd1
Name
(RefSeq) piRNA biogenesis protein EXD1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112256679 (exd1)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
112256679 (exd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
112256679
NCBI-ProteinID:
XP_024285857
LinkDB
All DBs
Position
LG08:29783890..29792788
Genome browser
AA seq
565 aa
AA seq
DB search
MDDFQFMDSFKRKRIKLTLKTATFLGIVQRINANKTVILEDVVDVKNGRKFPGVKLFFGH
EILNVEFPNVTKSDRDNTSDHRPEGHLTVAEFQPYRKGLILNDDDESHVNFVVIDEFHEK
FGPAMMHIRKQQVIGIGADGVGTFQHERLCWLQIATKNKVYLFDILLLGARAFKNGLSMI
LENNHILKVTHDCRSLAGCLMAQFGVNLTNVFDTQVADILCFYTETGGFLPDRVSTLPKV
VSLHLKMSSSQLSSLNIKSLLTKEDKEVWYVRPCPLSLLKVMALSVIHLQPLRLVLLDAL
MADYTGLVDSYLSGSREEPVHMQNIGSSNVLELPRELRELEHTRQKRQKWAVDRYPVTEQ
GLLERSNPRPLPPSQNGQGQDTATQRQTDPPVPTAVGPVVPAPGQGPAETPCPSNTLGAS
DLHAMTSALTQEAQQSYRKQPSGVVSPVAKSGAPGLLEIVMDTMAGRGRSLLKDPTPPIL
PVFPPLGRGLALPIPAAQVPKESPGALKTQALVGRVEVPVPPGPRPSPVQPSENIPGAGR
GLIQKPQGLTSPLSLSFSSFRKSHL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggacgactttcaattcatggatagcttcaagagaaagcgcatcaaattgaccctcaag
actgcgactttccttggaattgttcagcggataaacgccaataaaactgtgattttagag
gacgttgtggatgtcaagaatggaaggaaattccctggagtgaaactattctttggacat
gaaattctcaatgtggaattcccaaatgtaacaaagtctgaccgagataacaccagtgac
cacagacctgaaggtcacctgacagtggcagagttccagccttacaggaagggtctcata
ctgaatgacgatgatgagagccatgtcaactttgtggtcattgatgagttccatgagaag
tttggtcctgctatgatgcacatccggaagcagcaggtgatcgggataggagctgacggg
gtcgggacgttccagcacgagagactctgttggctgcagattgccactaagaacaaggtg
tacctctttgacatcctgttgcttggagcccgggccttcaagaatggcctgtccatgatc
ctagaaaataaccacatattaaaggtcactcatgactgccggagtctcgccggatgtttg
atggctcagtttggagtaaatctcaccaacgtctttgacactcaggtggcagatatcctg
tgcttctacacagagactggtggcttcctgccagacagggtcagtaccctaccgaaggtg
gtgagcctacatttgaagatgtcctcgtcacaactctcctctctcaacatcaagtctctg
ctcaccaaggaggacaaagaggtgtggtacgtgcgtccctgccctttatccctgctgaag
gtcatggccctgtcggtgatccacctgcagcctctacgactggtgctgctggatgccctc
atggctgactacacaggcctggtggactcctacctcagcggcagccgagaggaacctgtc
cacatgcagaacatcggctcgagcaatgttctggagctgcccagggagctgcgggagttg
gagcacacgcgtcagaagcgccagaagtgggccgtcgaccgctatcctgtcactgagcag
ggcctgctggagcgctccaaccccagacccctacccccatcacagaatgggcagggccag
gacacagccacccaaagacaaacagaccctcctgtccccacagcagtggggcctgtagtc
ccagcaccagggcagggcccagcagagacaccctgtcccagcaataccctgggggcctct
gacctccatgctatgaccagtgccctgacacaagaggcccagcagagctacaggaaacag
ccgtctggagtcgtcagcccagtggctaaatcaggagcaccaggactcttggagatagtg
atggacacaatggcaggcagagggaggtccctgttgaaagacccaacaccacccattctc
cctgtgttcccccccctgggaagaggcctggctctcccgataccagcagcccaggtcccc
aaggagagccccggagccctgaagacccaggccctagtggggagggtggaggtgcctgtc
cccccaggcccaagacccagcccagtacagccatctgaaaacattcctggtgcagggaga
ggcctcattcagaaaccccaaggtctcacctctcctctcagtctctccttcagttcattt
agaaagagccacctatga
DBGET
integrated database retrieval system
