Oncorhynchus tshawytscha (Chinook salmon): 112256700
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Entry
112256700 CDS
T05605
Symbol
mlh3
Name
(RefSeq) DNA mismatch repair protein Mlh3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
112256700 (mlh3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
otw03400
]
112256700 (mlh3)
DNA repair and recombination proteins [BR:
otw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
112256700 (mlh3)
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Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
112256700
NCBI-ProteinID:
XP_024285896
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Position
LG08:28849069..28854958
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AA seq
1267 aa
AA seq
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MIKCLSKEVQGKLRSGIAIFSLQQCVEELILNSIDASATCVGVRVDIEAFKVQVIDNGSG
MDIEDMESVGNRYFTSKCSSLEDLDNLKFYGFRGEAVASIANLAMLVEISSRTKMSVKTH
VKVFKDGKGLDVFEAETTRPSAGTTVVICNFFHNMPVRRNRMDSVLEFERIRQRVEAISL
IHPSVSFTLKNDCTGTMVVQLSKARNTYYRFVQIHGLGRAQKLGEINHSHAQFELSGYVG
REGHYNNTLQFLYVNDRLLLKTRIHKLLNLLLRKVGSSSRQNDSPGTPPATRSPKQRRGA
ELHAMYVINIMCHYSEYDICLEPAKTLIEFKDWESILFCIEEAVKAFLTRENLVSEISPE
DIQDYICKNVFSGQTASTDGVKDSIGKGVQTHMEGVTLECNVGKTLASELVHRRQIEDSD
KMKSVYQTCDGVESEQGDRVGKLRDKEVLTGFEQEQEYNTTNPKCRPSSVDTDQGLQYDS
ITDSSVTDSESYKEVTKENESNAHLKSAISCPESSQHSLIFKTKEENLKMSIEEGTEMKD
NAREHVSLSRCTVRAPCTLTQGIQSEMGSIKQTLPQPQDTELNPGGHRKIFLSHPYIHSS
LPSQKCLSHQSRKGLALDSREKLATKRKWPMVEGPGHLHVYNRESKDLPTGIPSKISTFM
SCQKLALYKEVGSLDRFRRIYGKLTESNPVPVDVNSNYLAIDATASQTKHLVMNAKAVLP
YLEADQERDVTESRLDLMKDHKSPLTLSMFTKLKSLSARSSEISLATKLCHLKHQRTEVA
TSAFVHPPETTSNEDICPQDTVENNAILDINNGEQHNNTGRNRDFIPGCSTNPLPDEKEA
NNVTASCDWLHHYDDAVGKLVYINKVTGLSKYEAPSAEETQVSCTSDVTNMAISVISKKG
IEYRCYPFQMDLVLPFLPKSKSGRVLSSGPDNRDDIQDSNSLSSLYSEWTNPVFARPPMV
GVDISSMQAEGLAVKIHNILFPYRFSKDMIHSMKVIHQVDKKFLACLINTQDQEPAACSK
TDGNLLVLVDQHAAHERVRLENLVADSYEDDPETPGERRLCSSTVAPPLEVSVTEEELRL
LRSCRPSLRGLGLEMQFSQIGDPKVLVGKVPMCFTEKESNELRRGRRSIIKPIVEEYLQE
QIELLRSTGRVRGTLPLTVLKVLASLACHGECYFLIQWSYCTLYTFLISVMAQTGAIKFN
DRLSKEECCSLVDALSSCQLPFQCAHGRPSIAPLVDVLHLNDQEEPPRPNLRKLRRMYKA
WELYGNR
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atgattaagtgtttatcaaaagaagttcagggtaagcttcggtctggaatagcaatattt
tcattacagcagtgtgttgaagagcttattctgaacagtattgatgctagtgcaacatgc
gtgggtgtgagggtggacatcgaagccttcaaagtgcaggttatagacaatggctcaggg
atggacatagaggatatggagtctgtcggaaacagatacttcacaagcaaatgcagttct
ttagaggatttagataatctcaaattctatggattcagaggagaagctgttgccagtatt
gctaatctcgccatgctggtggagatatcatccaggaccaaaatgtctgtgaagactcat
gtgaaagtcttcaaggatggtaaaggcttggacgtgtttgaggctgagactacccgccca
tctgcagggacgactgttgttatttgtaacttcttccacaacatgccagtgaggagaaac
aggatggatagcgtgctggagtttgaacggatcaggcagagagtggaggccatttcactc
attcacccctctgtctctttcacactgaagaatgactgcacagggaccatggtggtgcag
ctctccaaagcccgaaacacttactacaggtttgttcagatccatggtttaggtagggcc
caaaagcttggggaaatcaaccactcccatgcacagtttgaactaagcggttatgtagga
cgggaaggccactacaacaacaccttacagttcctctatgtgaatgacaggctacttctc
aaaacccgcatccacaagctgctgaaccttctcctacgcaaagtaggcagttcaagtcgg
cagaatgacagccctggtacacctcctgccactaggagcccaaagcagagaagaggagcc
gagctacatgcaatgtatgtcatcaatatcatgtgccactactctgagtatgacatatgc
cttgagcccgccaagaccctgattgaattcaaagactgggaaagtattctgttctgcata
gaagaggctgtgaaagcattcctgacaagagagaacttggtgagtgaaatctccccagag
gatatccaggactacatttgtaagaatgtgtttagtggccaaacagctagcacagacgga
gttaaggactccattggcaaaggtgtccaaacacacatggagggtgttaccctggaatgt
aatgttggaaagacccttgcatctgaacttgttcatcgacggcagatagaagactctgac
aagatgaaaagtgtttatcagacatgtgatggagttgaatcagagcagggtgacagagta
ggaaaactaagggacaaggaggtccttacgggttttgaacaggaacaagagtataatacc
acaaacccaaaatgtcgaccaagctcagtagatacagaccaaggtctacagtatgattca
attacagattcatcagttacggactcagagtcttacaaggaagttacgaaagagaatgaa
agcaatgcacatctgaaatctgctatttcttgtcctgaatcatctcagcatagtcttatc
tttaagacaaaggaagaaaatctgaaaatgagtatagaagaaggaacagagatgaaggat
aatgcaagagagcatgtatccctctcaagatgtactgtgagagcaccatgtactctcact
cagggaatccagtcagagatgggctctatcaaacagacactacctcaaccacaggacaca
gaactgaatccaggtggacacagaaaaatctttctatcacatccatacattcatagcagt
ttaccctctcagaaatgtctctcccaccagagtagaaaagggctagcgttagactctaga
gagaaacttgcaacaaaacgaaaatggcctatggtggagggcccaggccatcttcacgtt
tacaacagagaaagtaaggaccttcccactggcatcccttcaaagatttctacgttcatg
tcatgtcaaaagctggctttatataaagaggttggatctctggacaggttcagaagaata
tacgggaagcttaccgaatccaatccagttcctgtcgacgttaatagcaattatttagca
attgatgccacagcttcccagaccaaacacttggttatgaatgccaaggctgttttgccc
tatcttgaagcggatcaagaaagggatgtcacagagtcacgtctggatctgatgaaagac
cacaaaagcccattaacactctccatgttcaccaaactcaaatctctctcagctcggagc
agtgaaatatctttggctaccaaactctgtcatttaaaacaccaaaggacagaggttgca
accagtgcatttgtacatcctccagagacaacttcaaatgaggatatatgtccccaggac
actgtagaaaacaatgctattctagacatcaataatggagaacaacacaataacactggc
cggaatcgtgacttcatcccgggctgcagtacaaatcctctgccagatgaaaaggaagcg
aacaatgtcacagcatcatgtgattggctgcatcactatgacgacgctgtggggaagctg
gtctacatcaacaaagtgacaggactcagtaaatatgaagcaccctctgctgaagagaca
caagtgtcttgcacgtcagatgtcaccaacatggcaatcagtgtcatctccaaaaaaggg
attgagtaccggtgttacccatttcaaatggatctagtcttgcccttccttcccaaatcc
aaatcagggagagttcttagttcagggcctgacaatagagatgacattcaggactctaat
tcgctgtcctccctgtactctgagtggactaaccctgtgtttgcacgacctcctatggtt
ggtgtggacatatcaagtatgcaagctgaaggactggctgtgaagatccataacatcctc
tttccataccgcttctccaaggacatgattcactcaatgaaggttattcatcaagtggat
aagaagtttcttgcatgtcttatcaacacacaagaccaagagcctgcggcctgcagcaaa
actgatgggaaccttttagtgttagtggatcaacacgctgcgcatgagagagttcgtctt
gagaatctagttgcagattcgtacgaggatgatccagagaccccgggggagagacggcta
tgctcatccactgtagccccaccactggaggtcagcgtgacagaggaggagctgaggctg
ctcaggtcctgccggccatccttgaggggcctgggtctggagatgcagttctcgcagata
ggagatcccaaggtcctggtggggaaggtgccaatgtgtttcacagagaaggagagcaat
gaactccgccgggggagacgttctatcatcaagcccatagtggaggagtaccttcaagag
cagattgagttactgcgttcaactggcagagtgcgagggacattgcctcttacggtactt
aaagtcctcgcctcccttgcatgtcatggtgagtgttattttctaattcagtggtcatac
tgtactttgtatacgtttctcattagtgtcatggcccaaacaggtgcaatcaaattcaat
gaccgcctcagtaaggaggagtgttgcagcctggtagacgctctatcttcatgccagctg
cccttccagtgtgcccatggccgcccatccatcgccccgctggtagacgtccttcacttg
aatgaccaagaggaaccacctagaccaaacctcagaaaactgagaagaatgtacaaagcc
tgggaactttatggaaatagataa
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