Oncorhynchus tshawytscha (Chinook salmon): 112256702
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Entry
112256702 CDS
T05605
Name
(RefSeq) ligand-dependent corepressor isoform X3
KO
K26260
ligand-dependent corepressor
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112256702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112256702
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
112256702
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Gene cluster
GFIT
Motif
Pfam:
HTH_psq
Motif
Other DBs
NCBI-GeneID:
112256702
NCBI-ProteinID:
XP_024285904
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Position
LG01:74946752..74994239
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AA seq
629 aa
AA seq
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MASLCKKQQCTIERRGFRQELDSWRHKLIHCVGFESILEGLFGSGLLEDLTLFKDVSPGS
TDCEPEGVSDWSFDENCLFCCLRRDKVKEHLVGLSNQGLESGAKPLLVKDQIKINRLEKQ
AEEFLSAVLYKKDVPSFSDLHIPVVAREIMQRMIRQFAAEYTSKNSSSSQDIPSAPSPAT
QPHSDQSLPPPPSLPPAASLGGTATSSVPSQNPVLSKLLMADQDSPLDLTVKKLPPQPVE
QDGVLDLSLKKGWARSSMSSHHSPHLSQMSTLRGRSLRADGQAGLPMRSLQDGRRRENFG
HSAPLKPTSPLGHVPHIKLEVNQDSDTELSPNQNYTSRPFDHLSLSRYGSPSWASKTHFG
ALLKLRANSGAGDHLKDLPSLLEAAGLFKSPSCGKAILQARRDQGLSLSHSPPVDLKIPQ
VRGLGGLGVDLSWGSLSSDSYSLPSPHCENSLGKRLRSILPKHGRRGSSGGLDGPGRDGE
YWGSSDADRPASGGQYPTSDPEADLCNKQPRKKRGRYRQYNTELLEEAIEVVMGGKMSVS
KAQTVYGIPHSTLEYKVKERLGTLKHLPKKKLKLMSHMEELEGMEAPEGKEALDAPLDPQ
ESLCEGRPSVSVPRENGRELLATGLSPDK
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtctgtgcaagaagcagcaatgcacgatcgagaggcgaggctttcggcaggaa
cttgactcgtggcggcacaaactcattcattgtgtaggttttgagagcattttagaaggg
ttgtttgggtcggggctgctagaggatctaacgttatttaaagatgtttctcccggatcc
acagactgtgagcctgaaggtgtgtcagactggtcatttgatgagaactgcctgttctgc
tgcttaagacgagacaaagtcaaggagcacttagttggcctgagcaaccaggggttggag
agtggggctaaacccctgctggtcaaagaccagattaagatcaacagactcgagaaacaa
gctgaggaattcctcagtgcagtcctctacaaaaaagatgtccccagcttctcagacctg
cacattccagtagtggctcgggagataatgcagaggatgatccgccagtttgctgccgaa
tatacctcaaaaaacagctcctcttctcaggacatcccctctgcccccagccctgctacc
cagccccactcagatcagagcctgccacctcccccctcgctgccccctgctgccagcctt
ggtggtactgctacatcctccgtacccagccagaaccctgtcctctccaagctgcttatg
gccgaccaggactcgcctctcgacctcactgtcaaaaagcttccgccacagcctgtagaa
caagatggagtcctggacctgtcactcaaaaagggatgggccagaagcagcatgtcatcg
caccacagccctcacctttcccagatgtccactctcagagggcgttccctgagagctgac
ggacaggccgggctgcctatgaggagcctgcaggatgggaggaggagggagaatttcggc
cactctgcccctttaaagcccacctcgccactcggtcatgtgccgcacatcaaactggaa
gtgaaccaggattccgacaccgagttgtctcccaaccagaactacacctccagacccttc
gaccacctctctctctctaggtatggttctccgtcctgggcctccaagacccacttcggg
gccctcttgaagctccgggcaaacagcggagccggggaccacctcaaagacctaccgagc
ctgctggaggccgcggggctcttcaagtccccctcctgtgggaaggcaatcctccaggcc
cggagagaccaggggctctccctttctcactccccgcccgtcgacctcaaaatcccccag
gtgcgaggcttaggaggcctgggggtggacctctcctggggctccctgagctctgattcc
tacagcctccctagcccccactgtgagaacagcctcgggaagaggcttaggtccatcctg
cccaaacacggtcgccggggaagcagtggaggtctggacggtcctggaagagatggggag
tactggggttcatctgatgcagaccgccctgcctctggggggcagtaccctacctctgac
cctgaggcagacctctgcaacaagcagccgaggaagaagaggggaagataccgtcagtac
aacacagagctgctagaagaagctatagaagtggttatgggggggaagatgagtgtgtcc
aaggctcagaccgtctatgggatccctcacagcactctggagtataaagtcaaggagcgc
cttggtaccctgaaacacctgcccaagaagaagctgaagctgatgagccacatggaggaa
ctggagggtatggaggccccagagggcaaagaagctctggatgcgcccctggacccccag
gagtcgctgtgtgaggggagaccgtctgtgtctgtgcccagagaaaatggcagggagctg
ctcgccacaggcctctcaccagacaagtga
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