Oncorhynchus tshawytscha (Chinook salmon): 112256748
Help
Entry
112256748 CDS
T05605
Name
(RefSeq) exportin-5-like isoform X1
KO
K14289
exportin-5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112256748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
otw03016
]
112256748
03036 Chromosome and associated proteins [BR:
otw03036
]
112256748
Transfer RNA biogenesis [BR:
otw03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
112256748
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
112256748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
Motif
Other DBs
NCBI-GeneID:
112256748
NCBI-ProteinID:
XP_042181478
LinkDB
All DBs
Position
LG01:complement(75199024..75221019)
Genome browser
AA seq
1223 aa
AA seq
DB search
MMGEPVADMCDRLVKAVNVMMDAESSQIYRLEALKFCEEFKEKCSFCVPCGLQLADTTQT
AVVRHFGLQILEHVIKFRWNNMPQQEKVQLKNCAMGLLSTGTYSILEEESHIKDVLSRII
VEMIKREWPQHWPDMLKEMEALTSVGEAQTELVMLILLRLAEDVITFRTLPTQRRRDIQQ
TLTQNMESIFSFLLAILQLHVDEYRKLKRIPGQELQAKAHCRVGVATLNTLAGYIDWVAL
ANITNDNCRLLEMLCLLLSETELQLEAAECLLIAISRKGKLEDRKPLMVLFDDVAMHYIL
SAAQSADGAAICNKSSPTQPVGAGVVERHYTFLKRLCQVLCALGSQLCSLVGSDVEVEVP
VNLSKYTEAFLAFTTHPSQFLRSSTQITWGTLFRHEILSKDPVIIQMTIKYFRATMTNLV
KTGFPSSNDSPSCEYSRHDFDSDEDFNSFFNSFRAQQGEVVRNACRIVPLEAFQIAAEWL
QYQTSAPIDIGTTVSKTAEGLCSILSPSVVQWDAMTFFTESVVGKIFKNVEDEKLPVDQG
IELLQAVLNYNTQDPLILSCVLTNVSVLFPFVTHRPHFLPQVLYKLFASITFEVVEESKA
PRTRAVKNIRRHACSSIIKMSRDYPQFILPCFDMMYNHVKKLFSSEALLNMLEKCALMEA
LVLISNQFKDYNKQKHFLEELMATVVARWTSDEMRRVLWDPALFLDFVGADQLVAEGTEH
TTGINRSRLSFCVYTILGVVKRARWPADLEEAKAGGFVVGYSPNGAPIYRNPCSAQVLAL
LPNLLALIRTHNSLFLPENMCRLSETFSKAYDMIEVEKNMVLGLPQPALDIYDPPVYKTH
LERMQGFFCTLYDNCYHILGKAGLSLQQDFYTIEGLAEQIVGSVFVSLDNMPDHRLRTML
RVFLKQLVVSCPQECYNSLLCPLLGPLFAYMLQRLNLRWQIINQRSTVSGEEEEDESCEE
NQEMLEEQLVRLLTREVLDLLTHACIMKKVPAPAGNKEDVDEEEMMSTESQAVTVSPAQP
TGELTELGKCFLKHEDIYMTLLTISFTSLSWKDTSNCHRSASIVCWTLLRQVVGGNLLPE
AVTWFYTSVLKGLQMHGQHEICNSALTQLALLMYENLRPRYMELRDVMTQIPDINLEALD
QYDQRLLEPSSAQRLGEKKRKDQFKKLIAGAVGKALAQQFKKEVHIRNLPSLFKKPKPEK
RDILETSESGALAALFSPVLDDI
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtgaaccggtggctgatatgtgtgatcggcttgttaaagctgtgaacgtgatg
atggacgcggaatctagccaaatatatcgcttggaggccctaaagttttgtgaagaattc
aaagagaagtgttccttctgtgtcccatgtgggctacagttggcagatacaactcaaaca
gcagtggtgaggcactttggtctacagatactggagcacgtcatcaagttcagatggaac
aacatgccacagcaagagaaagtccagctgaagaactgtgctatggggctattgtcaact
ggcacgtattctatcctggaggaggagagccacatcaaggacgttctctcgcggatcata
gtggagatgatcaagagagaatggcctcagcactggcctgacatgctgaaggagatggag
gcactcaccagtgtaggggaggcccagacagagctggtgatgttgatcctgctgcggctg
gcggaggacgtgatcaccttccggaccttgcccacccagcgccgccgggacatccagcag
accctcacccagaacatggagagtatctttagcttcctgctcgccatcctgcagctccac
gtcgacgagtaccgcaaactgaaaagaatacctggccaagaattgcaggccaaggcccac
tgtcgggtaggcgtggccactctaaacaccctggcaggctacatagactgggttgccctg
gcaaacatcaccaatgacaactgtcgcctgctggaaatgctgtgtctgttgctcagtgag
acagagctgcagctggaggctgcagagtgcctgctcatcgccattagccgcaaggggaag
ctagaggacaggaaaccactcatggtgctgtttgatgacgttgccatgcactacatcctc
tctgctgcacagtctgcagatggagcagcaatatgcaacaaatcctctccaacacagcca
gtgggggcgggggtggtggagagacactacaccttcctgaagaggctatgtcaggtcctg
tgtgccctgggcagccaactctgctcattagtgggttcagatgtggaggtagaggtacca
gtaaaccttagcaagtacacagaagcgttcctggccttcaccacacacccaagccagttc
cttaggtcttccacccagatcacatggggaactttgttcagacatgagattctctccaag
gatcctgtcatcatccagatgaccatcaagtactttagagccaccatgaccaacctagtc
aagactggtttcccttccagcaacgacagtcccagctgtgagtactcccgtcatgacttc
gacagtgatgaagacttcaactccttcttcaactcgttccgagcgcagcagggggaggtg
gtccggaatgcgtgtcgtattgttcccttggaggccttccagattgcagcagagtggctg
cagtatcagaccagtgcgcccattgatatcggaaccactgtgtctaagacggctgagggg
ctgtgttctatcctgtctccgtcagtggtccagtgggatgctatgaccttctttacagag
agtgttgtgggaaagatctttaagaacgtggaggatgagaagttgccggtagaccagggc
attgagctgctacaggctgtgttgaactacaacacccaagaccctctcatcctgtcctgt
gtcctcaccaacgtctccgtcctcttccccttcgtcacacaccgacctcacttcctgcct
caggtcctctacaagctatttgcctccatcacattcgaggtggtagaggagagtaaggca
ccacggacgcgtgcggtgaagaacatcagaagacacgcctgctcctccatcatcaagatg
tctcgagactacccacaattcattcttccgtgttttgacatgatgtataaccacgtgaag
aagctgttctccagcgaggctctgttgaacatgctggagaagtgtgctcttatggaggcc
ctggtcctcatcagtaaccagttcaaagactacaacaagcagaaacacttcctggaggag
ctcatggccactgtggtcgctcgctggacctcagacgagatgaggcgtgtgctgtgggat
cctgctctgttcctggacttcgttggtgctgatcagctggtggctgaaggcacagaacac
acaacgggcatcaacaggtcacggttgagtttctgtgtgtacaccatcctgggggtggtg
aagagggcccgctggccggctgacctggaggaggcgaaggcaggggggttcgtagtgggc
tactcccctaatggagcccctatctacagaaacccctgcagcgcccaggtcctggcactg
ctgcccaacctgctcgccctcatcagaacccacaacagtctcttcctgccggagaacatg
tgtcgtctaagtgagacgttctccaaggcctacgacatgatagaggtggagaagaacatg
gttctaggcctgcctcagccagccctggacatctatgaccctccagtgtataagactcat
ctagagcgcatgcagggattcttctgtaccctctacgacaactgttaccatatcctgggg
aaggcaggcctatcattgcagcaggacttctacaccatcgagggattggctgaacagatc
gttggttctgtctttgtctccctcgacaacatgcctgaccacagactccgcaccatgctc
cgggtgttcctgaagcagctggtggtgtcatgtcctcaggagtgctacaacagtctgctc
tgccccctgctggggcctctgttcgcctacatgctacagagactcaatctcaggtggcag
atcatcaaccagaggagtactgtcagtggggaggaggaggaggacgagtcgtgtgaggag
aatcaggagatgctggaggagcagctagttcggctgctcaccagagaggttctggacctg
ctcactcacgcctgcataatgaaaaaggtgcctgcgccagcaggaaacaaggaagatgtg
gatgaggaggagatgatgtccactgagtcccaggcagtcactgtctcccctgcccagcca
acaggtgaactgacggagctggggaagtgttttctcaaacacgaggacatctatatgacc
ttgttgaccatctcattcacctctctgtcctggaaggacaccagtaactgtcaccgcagc
gcctccatcgtgtgctggaccctgctacgacaggttgtaggtgggaaccttttgccagag
gcggtcacatggttctataccagtgttctgaagggactgcagatgcatgggcagcatgag
atctgcaactcagccctcacacaactggccctgcttatgtacgagaacctgcggccgcgg
tacatggagctaagagacgtgatgactcagatccccgacatcaatctggaggctctagac
cagtacgaccagcggttgctggagcccagctccgctcagaggttgggagagaagaagagg
aaagaccagttcaagaagctcattgctggcgctgtggggaaagctctggcccagcagttc
aaaaaggaggtacatatacgaaatcttccgtctctctttaagaagccgaagcctgagaaa
agggacattctggagaccagtgagagtggagcactagcagcactcttctccccagtgctg
gatgacatctag
DBGET
integrated database retrieval system
