Oncorhynchus tshawytscha (Chinook salmon): 112256802
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Entry
112256802 CDS
T05605
Symbol
ralgapa1
Name
(RefSeq) ral GTPase-activating protein subunit alpha-1 isoform X4
KO
K25768
Ral GTPase-activating protein subunit alpha
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112256802 (ralgapa1)
Membrane trafficking [BR:
otw04131
]
Exocytosis
Tethering complex
Exocyst complex assembly proteins
112256802 (ralgapa1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rap_GAP
RALGAPB_N
Motif
Other DBs
NCBI-GeneID:
112256802
NCBI-ProteinID:
XP_024286078
LinkDB
All DBs
Position
LG08:complement(21079456..21193204)
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AA seq
2112 aa
AA seq
DB search
MFSKKPHGDVKKSTPKVLDPKKDVLTRLKHLRIVIENAESGDLKHFFDQYYSHIYYVFFE
NFVVIEVSLKQKGHKSQREELDSILFIFEKILQLLPERIQGRWQFHSIGLILKKLLHTGN
SLKIRREGVRLFLLWMQALQGNALREQLWIFACLIPGFPSPQSELGPRTLDNLVNPPLSL
QETQVTPEEISPLVPPQAGDKAQEDLTGYFLEALLKYMVNQAKSLEWKCKDNHEKGFAFL
FGNFKKYYLPHIFPNFSKETSLYHPILEVPSMRPKPYYSVVKKDPETNEAVYCTKESLLN
ARVIFIRWLVSFWLEPRSNTGTHIPGVDGERESVPKNIQRAAAGLAARGHGLGEDLGPRA
DSLDRAIGCEQEQSHSNTSTLTEREPSSSSLCSMDEEHLTDKEVVRRVLCSSRTNVNFIT
EVFRQAFLLPMCEAAVMRKVVRVYQEWFAQEDKPVFLREPEEERFFTTVGGINLEPVPQQ
DAEKEEGVNKVSEKELLEYSVHAGVQPTLQVFVTNSANVFLLEPANELKVLLEEHVDMCK
RVLNIYRSLVMHETMDQKTWEQILLVLLRVTECVMRRPPSIMPHGKKNITLSGRLAGAVF
QTLIVAWIKGNLNVYISRELWDDLLAVLSSLTCWEELVTEWSLTMETLTKVLARNLYSLD
LNELPLDKLSEQKQKKHKGKGGAHEGQKTAVGHSFSKGWSRDQPGSGQAAAMRQRSATTA
GSPGMEKARNIMRQKTVDMEDPPMVMASRAPRIRHCSQSENTPASEVFSASSDLEPQGPP
LPRSSSASDIMEPFIAERVKGNKEDPCQTMRAVSSDNGNQNFGDLMDEFIQERLRARGTS
GMTRRDSSPCSLEIPKDLPELLGRQNVSQPVDDPGVPSEWTSPASSSDVISSDSQSDSFN
AFQYANCKLENFSFGPDGCGAGSLDQDNASLGGLPQTAEEQELSSLTTLHIDSETSSLSQ
HGLSADAITITGSESASPMHSLGGSCSQSPSPATLTAEHIGLQHEDLQLDEKLHHSVLHT
PDDLETSEFPTEDCSVMAGGSLTGWHADVATVMWRRMLGILGDVNTIKDPEIHAQVFDYL
CELWQNLAKIRDNLGISLDNQSSPPPPVLIPPLRILTPWLFKATMLTERYKQGKLHAYKL
ICKIMKRRQDVSPNSDFLTHFYNIMHCGLMHVDQDIVNTIIKHCSPRFFSIGLPGATMLI
LDFIIAASRVTACSSLNAPRVEAQILLGSLVCFPNLYEELPALHPTTADVVMTKFRDVKE
HIIKHILSSAIDEPSAPARCVALCSLGIWLCEELVHGTQHPQIKEALNVICVTLKFPNKT
VALVASDILHLLINYVDDLQKFPLDTPKKIVEILIATITHLLPTTESSPHELDKRLVVSL
LLCLLDWVMALPPKTLLQPVQTLSPDKEKPDKSVLSCIYKVLHGCVYGAQNFNSPRYFPM
NLSDLTSPDYDPFLLLESLKEPEPLHSPDSERSSKLQPVTEVRSRIQHGLISIAARTVIT
HLVNHLGHYPMSGGPATLTSQVCENMDNPYSDSPDLAPELFDGPNLQFFVLNGTTLLSCL
QVRAEDGVPGGGMSAGLTTTSACVRVIVRDISGKHSWDSAVLYGPPHCGVPNQPLHLYSN
TPTERMTTEGEKEKNWVGDPIEKEEEEREEEEVVVLVLGEEEQGEAVEEEGEEEEEEVEG
VLELMAPQAKRVCREAVPSWNSLREEDALDEMLQYLGYSSPECLQRAGGTLNIPAPPPVC
VSEKQENDVINAILKQCAEERDFAVHKGNGLNMRAMEQGEPGPQRPQSAFYYCRLLLNIL
GMNSWEKRSNFHLLKKNEKLLRELKNLDSRQCRETHKIAVFYVAEGQEDKHSILCNTRGS
QAYEDFVSGLGWEVNLTSHCGFMGGLQRNKSTGLTTPYFATSTVEVMFHVSTRMPPDSDD
SLTKKLRHLGNDEVHIVWSEHSRDYRRGIIPTEFGDVLIIIYPMKNHMYSIQILKKPEVP
FFGPLFDGAIVDEKILPTMVRATALNASRALKSLIPLYQNFYEERARYLETIVQHHLEPT
TFEDYAARVFCPAPYLHLPSDPGSCLESQQGESPAAALLDGADQLALPMSPRTSKSRMSM
KLRRSSGSANKT
NT seq
6339 nt
NT seq
+upstream
nt +downstream
nt
atgttctcaaaaaagcctcatggggacgtcaaaaaatcaacaccgaaagtgttggatccc
aaaaaagatgtactgacacgcctaaaacacctgcggatcgttatagaaaatgcagagtcg
ggagacctgaagcatttctttgaccagtactactctcacatctactatgtgttctttgag
aactttgttgtcattgaagtcagtctcaaacaaaaaggtcacaaatcacaaagggaagaa
cttgactccattcttttcatattcgagaaaattctgcaactcctaccagagcgaatacaa
ggacgatggcagttccacagcataggcctcattctgaagaagttgctgcacactgggaac
tctttaaagatccgaagggagggtgtacgtctgttcctgctatggatgcaggccttgcaa
ggcaacgcactgagagagcagctatggatttttgcctgtctgatccctggtttcccatct
ccccagtcagagcttggccctcgaaccctggacaacctggtcaacccccctctcagcctc
caggagactcaagttactccagaagagatcagtcccctggtccctcctcaggcaggggat
aaagcccaggaagacctcacaggatactttctagaggctcttctgaaatacatggtaaac
caggccaaaagtctggagtggaagtgtaaagacaaccacgagaagggctttgcattcctg
tttggaaacttcaagaaatattacctgccgcacatattccccaacttctccaaggagacc
agtttgtaccatcccatactggaggttccttccatgagaccaaagccttactacagtgtg
gtgaagaaagacccagagaccaacgaggcagtgtactgtaccaaggagagcctcctcaat
gcccgcgtcatattcatccgctggctggtgtccttctggctggagccacgctccaacact
ggaacacacatccccggggtggatggagagagggagagcgttccaaagaacatccagagg
gcagcagcagggctggcagcgcggggacatggcctgggggaggacctgggccccagggca
gacagcctggacagagcgattgggtgtgagcaggagcagtcccactctaacacctccacc
ctgacggagagggagcccagctcctccagcctgtgtagtatggacgaggagcacctcact
gacaaggaggtggtgagacgagtcctctgttcctccagaactaatgtcaacttcatcacc
gaggtcttcagacaggccttcctgttgccgatgtgtgaggctgcagtcatgaggaaggtg
gtgcgggtgtaccaggaatggttcgcccaggaggacaagcctgtgtttctgagggagccg
gaggaagagaggttctttaccacggttggagggatcaacctagagcctgtaccccagcag
gacgctgagaaggaggagggggtgaataaagtgtctgagaaagagctgctggagtacagt
gtgcatgccggtgttcagcccactctacaggtgtttgtcaccaactctgccaacgttttt
ctgctggagccagccaacgagctcaaggtgttgctggaggaacatgttgacatgtgcaag
agagtcctcaacatctaccgcagcctggtcatgcatgaaaccatggaccagaagacatgg
gagcagatcttgctggtgctgttgagggtgactgagtgtgtgatgaggagacctccctcc
atcatgccccatggcaagaagaacatcactctctctgggaggctggccggggccgtcttt
cagaccttgatagtggcctggatcaaagggaacctgaacgtgtacatctccagggagctg
tgggacgacctgctggccgtgctgtcctcgctcacctgctgggaggagttggtcacagag
tggtccctcaccatggagacgctcaccaaagttctggcccgcaacctgtacagtctggac
ctcaacgagctgcccctggacaagctgagcgaacagaaacagaagaaacacaagggaaaa
gggggcgctcacgagggccagaagacggctgtgggccactcattctctaagggctggagc
agggaccagcctgggagcggtcaagcagcagccatgaggcagcgcagtgccaccactgct
ggctccccgggtatggagaaggccaggaacatcatgcgccagaagactgtggatatggag
gacccccccatggtcatggcctctcgggcacccaggatccgccactgctcccagagcgag
aataccccagcctctgaggtgttctcagcatccagtgacctggaaccccaggggcctccg
ctcccccgcagcagcagcgcttctgacatcatggagcccttcatcgctgagagggtcaaa
ggcaacaaagaggacccttgtcagacgatgcgtgctgtgtccagtgataacggcaaccaa
aactttggagacctgatggacgaatttatccaagagcgtctgcgagcgagaggcacctct
ggcatgacgaggcgtgacagtagcccctgtagtctggagatccccaaagacctgccggag
ctcctgggccgtcagaacgtctcacaacccgtggacgaccccggtgtgccctctgagtgg
acctcccccgccagcagtagcgacgtcatcagctccgacagccaatcggactcgttcaac
gccttccagtacgccaactgcaagttggaaaatttcagctttggtccagatggctgtggt
gcggggtctttggaccaggataacgctagccttggagggctgccccagactgcagaggaa
caggagctgtccagcctcaccaccctgcacatagattcagagaccagcagtctgagccag
cacggcctgtctgcagacgccatcaccatcacaggttcagagagtgcgtccccgatgcat
tccctgggtggttcctgctcacagagcccgtctccagccaccctgaccgctgaacacata
gggctgcagcacgaggacctgcagctggatgagaaactacatcactctgtactacacact
cctgatgacctggaaaccagtgagtttcctacagaggactgcagtgtgatggccggtggc
tccctgaccggttggcacgctgacgttgccacggtgatgtggcggaggatgctaggcatt
ctgggggatgtgaacaccattaaggacccagagatccacgcgcaggtctttgactatctc
tgtgagctgtggcagaacctggccaagatcagagataatctgggcatctctctggacaac
cagtcatctcctcctcccccggtcctcatccctcccctccggatcctcaccccctggctc
ttcaaagcgaccatgctgacagagaggtacaaacaggggaagctacacgcctacaagctc
atctgtaagatcatgaagaggaggcaggacgtttcgcccaactcagacttcctcacacac
ttctacaacatcatgcactgtggccttatgcacgtcgaccaggacatagtgaacaccatc
attaagcactgttctcctcggttcttctccatcgggctgcctggagccaccatgcttatc
ctggattttatcatcgcagccagcagagtcacagcctgctcctccctcaatgccccacgg
gtggaggctcagatcctgctgggttctctggtgtgtttccctaacctatacgaggagctg
cctgccctacaccccaccaccgctgacgtggtcatgaccaagttcagagacgttaaggaa
cacatcatcaaacacatcctgagttcagccatagatgaaccttcagccccagccaggtgt
gtggccctgtgcagtctgggtatctggctgtgtgaggagttggtccacggcacccagcat
cctcagatcaaagaagccctcaatgtcatctgtgtcactctaaagtttccaaataaaact
gtcgcgctggtggcctccgacattctgcacttgctcataaactatgtcgatgaccttcag
aaattccccctcgacactccaaagaaaatagttgagatcctcatagcgactatcactcac
ctgcttcccactacagaatcctcgcctcatgaactggacaagaggttggtggtgtctcta
ctgttgtgcctgctggactgggtgatggctctgcctcctaaaactttgctgcagcctgtc
caaaccctcagccctgacaaggagaagccagacaagtctgtcctcagctgtatctacaag
gtgctgcatggctgtgtgtatggagcccagaacttcaacagccctaggtatttccctatg
aacctgtcagacctgaccagtccagactacgaccccttcctgctactggagagtctgaag
gaaccagagcccctccactcccctgactcagaacgctcctccaaactacagcctgtcact
gaggtgcggagccgtatccagcacggtctgatctccatcgctgccaggacagtcatcacc
cacctggtcaaccacctcgggcactaccccatgtctggaggccctgctaccctgaccagc
caggtgtgtgagaacatggacaacccctacagcgatagccctgacctggccccagagctc
tttgatgggcccaacctacagttctttgtcctgaatggcaccaccctcctatcctgtctg
caggtccgtgctgaggacggtgtgcctggtggaggaatgtctgcaggcctcaccaccacc
agtgcctgtgtgagggttatcgtccgagacatctccggaaaacactcgtgggattcggct
gtactgtacgggccacctcactgtggtgttcccaatcagcccctgcacctctacagtaac
acaccaacagagagaatgactacagagggggagaaggagaagaactgggttggagaccct
atagagaaggaagaagaggagagggaagaggaggaggtggtggtgttggtgctgggagag
gaggagcagggggaggctgtggaggaggaaggagaggaagaagaggaggaagtggaaggt
gtgttggagctcatggccccgcaagctaagcgtgtgtgtcgcgaggcggtcccgtcctgg
aactccctgcgagaagaagatgctctagatgagatgctgcagtacctgggttactctagc
cccgagtgccttcagcgtgccggaggcacccttaacatccccgccccaccccctgtctgc
gtgtcggagaagcaggagaacgacgtgatcaacgccatcctgaagcagtgtgcagaagag
agggactttgcggtgcacaaggggaatgggctgaacatgagagccatggagcaaggggag
ccagggcctcagaggccccagtcagccttctactactgcaggctgctactcaacatcctg
ggcatgaactcctgggagaagaggagcaacttccatctcctgaagaagaacgagaagctg
cttagagagcttaagaacctcgactccaggcagtgtcgagagacgcacaaaatagccgtg
ttttacgtggcagaggggcaggaggacaagcactctatcctgtgtaataccagggggagt
caggcctacgaggactttgtctctgggctgggctgggaggtgaacttgaccagtcactgt
ggctttatgggaggtcttcagcggaacaagagcactggtctgaccacgccttacttcgcc
acctccaccgttgaggtcatgttccacgtctccacgcggatgcccccagactcagacgac
tcactcaccaaaaagctaaggcatctcgggaatgacgaggtgcacattgtgtggtctgag
cactcgcgggactacaggagaggcatcatccctacggagtttggagacgtcctcatcatc
atctaccccatgaagaaccacatgtacagcatccagatcctcaagaagccagaggtaccg
ttttttgggcccctgttcgatggagccatagtggatgagaagatccttcccaccatggtc
cgggccacagctctcaacgccagcagggctcttaaatccctcatccccctttaccagaac
ttctacgaggagagagcgcgttacctggagaccatcgtacagcaccacctggagccaacc
accttcgaggactatgcagcaagagtcttctgccccgctccctacctccacctcccgtca
gacccaggctcatgcctcgagagtcagcagggagaaagtccagcagcagcgcttctagac
ggggccgaccagttagccttgccaatgtcccctcgtactagcaagagccgtatgtccatg
aagctccgacgctcctccggctcggccaacaagacctga
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integrated database retrieval system
