Oncorhynchus tshawytscha (Chinook salmon): 112256809
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Entry
112256809 CDS
T05605
Name
(RefSeq) F-box only protein 33
KO
K10310
F-box protein 33
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112256809
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
112256809
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
GT-C_AftD
LRR_8
Motif
Other DBs
NCBI-GeneID:
112256809
NCBI-ProteinID:
XP_024286097
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Position
LG08:complement(21000951..21008611)
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AA seq
527 aa
AA seq
DB search
MLFVFHTESSGTVPLSHNLTTVIFTLLFANNSLVACAMALCGGVGAMALPSELIVHIFSF
LSDRDKLRASSVCSRWRECLFYPSLWMELKLRVGGGSNGGGYGSEQTPRLDFLMRKFGSF
VRELQLEFAPVEGYLRPLNGVEGRMESVESDPQFPGRWKEAIITYLDQVLCVLGCIRNNR
NLQKLSLYGDTCILQDEGILDSAYLNQVDQGGVKIKEIQQLLVEVLSNSRQMKWLSSAFM
LGVVTPCSLASLSNPSAASLEHLSLLDNQLPCLSSPVELERLVHLRSLALDFCDFTSEMC
RLLAGGHRAPLHRLSLMVNGAALEAKPLDCTASEDDWKALVRRCANLRVYMMALDVSSQD
LLRVLKPSLPLERIHLDSYSTLVTDGTLELISQQYNKTLSHFVLMRDDTGFPDLSVNRNE
DPLVLLAWRCVHLSVLVIHGYTVWSHNLVAISRLRGSSLKVLAVSEESIDFDPDQGVFME
GDPVHNLVKEVSQGLGRIWHPSMDSNLVLSEPTQHFHREMQSFSLGM
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttgttttccacacagagagtagcggaacagtaccgttgtcgcacaatcttaca
acggttatatttacacttttgtttgcgaataatagtttagtggcctgcgccatggctctg
tgcgggggtgttggagccatggctttaccaagcgagcttatcgtccacatattttcattc
ttgtccgaccgtgacaagcttcgggcctcgtccgtatgctctcgctggagggagtgtctg
ttttacccatcgctttggatggagctcaagttgcgtgtcggaggtggctcgaatggggga
ggctatggctccgaacagaccccaagattagactttctcatgaggaagtttggctccttc
gtgcgcgagctacagctcgagtttgccccagttgaaggatatctaaggccattgaatggc
gtggagggcaggatggaatctgtcgaaagcgaccctcagttccctggccgctggaaagag
gcaattatcacctatttggaccaggtgttgtgtgtcctcggatgtattcgaaacaacaga
aatctccagaagctgagtctgtatggggatacctgcattcttcaggatgagggcattctg
gacagtgcctatctcaaccaggttgaccaaggaggagtgaaaatcaaagagatccagcag
ctgttagtggaagttttgtctaacagcaggcagatgaagtggctgtcctcagccttcatg
ctgggtgtggtgaccccctgctccctggcctctctgtccaaccccagcgctgcctccctg
gagcacctcagcctgttggacaaccagctgccctgcctgtcctcccctgtggagctggag
cgccttgtccacctgcgttccctggccctcgacttctgtgacttcacctctgagatgtgc
cgcctgctggctggaggacaccgtgctccactacaccgcctctccttgatggtgaatggc
gctgctctggaggccaagccgctggattgcaccgccagtgaggatgactggaaggcccta
gtccgacgctgcgctaacctgcgggtctacatgatggccctggatgtgtccagccaggac
ctgctgagggtgctcaagcccagcctgcccctggagaggatccacctggacagctactcc
accctggtcacagacggcactctggagctcatttcccagcagtacaacaagaccctgagc
cacttcgtcttgatgagggatgacaccggcttccctgacctcagcgtcaaccgcaacgag
gacccgctggtcctactagcctggcgctgcgtacacctctctgtcctggttatccatggc
tacactgtgtggtcccacaacctggtggccatctcccgtctacgtggctccagcctcaag
gtcctggctgtgtccgaggagagtatcgacttcgacccggaccagggggtcttcatggag
ggtgaccctgtccacaacctggtgaaggaggtgtcccagggcctggggcgcatctggcac
ccctccatggactccaacttggtcctcagcgagcccacccagcacttccacagggagatg
cagagcttcagcctgggcatgtag
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