Oncorhynchus tshawytscha (Chinook salmon): 112256812
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Entry
112256812 CDS
T05605
Symbol
lrfn5a
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112256812 (lrfn5a)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
112256812 (lrfn5a)
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_5
LRR_1
ig
LRR_9
Ig_2
fn3
C2-set_2
Ig_5
Motif
Other DBs
NCBI-GeneID:
112256812
NCBI-ProteinID:
XP_024286101
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Position
LG08:complement(20445237..20497747)
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AA seq
790 aa
AA seq
DB search
MEKLLVCLLVIGIAVKAQICPKRCVCQILSPNLATLCAKKGLLFAPPNIDRHTVELRLAD
NFITSIKRKDFANMTRLQDLTLSRNTISFITPHAFADLENLRALHLNSNRLIRIANDTFS
GMSKLHHLILNNNQLTLIHLGAFNDLLALEELDLSYNNLESIPWEAIQRMTSLATLSLDH
NMIDYIPEGTFSLLQKLNRLDVTSNKLQKLPPDPLFQRAQVLATSGIMNSPSFALSFGGN
PLHCNCELLWLRRLSREDDLETCASPQHLSGRYFWSIPEEEFLCEPPLITRHSHEMRVLE
GQRVVLRCKARGDPEPAIHWISPEGKLVANSSRTLVYTNGTLDILISTVKDTGSFTCISS
NPAGEAHQTVELLIIKLPHISNSTNNIQEPDPGSSDISTSTRAGANGSNHTGDTKTSTDK
RVVIAEATSSTALIKFNFQRNIPGIRMFQIQYNGSYDDSLVYRMIPPTSKNFLVNNLAAG
TSYDLCVLAIYDDGITSLTATRVVGCVQFTTESEYLRCHFMQSQFLGGTMIIIIGGIIVA
SVLVFIIILMIRYKVCNTTNSGKGTLVTNVHSQTNGAQSQGCSVTPSVSKQAMGGSDGGG
GGCLKAVGHASDTLTHSSETSLPDCSTATSLVTQSWNTPGSSGSLKPKRKPAPKPYAAAA
TPEPNIEALPNAETQNTNRNNSTALEQPCAPVFHSPLPFSSVKDTPILRRAHPRPSSKYL
TLPVEGVRAKRRYSLNEDSSKHHCYVGTTQFGNMWSKRSMSMNGIVLQQEDIDSVKATFS
SSEWILESTV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaactgctggtctgtctgttggttatcggaatagcagtgaaggcccagatctgt
ccgaagcgctgtgtctgtcaaatactatctcccaacctcgcaaccctctgtgccaaaaaa
gggctcctctttgcccccccgaacattgacaggcacactgtggagctgcggctggccgac
aacttcatcaccagcatcaaaaggaaagactttgccaacatgaccaggctgcaggacctt
accctgtccaggaataccattagcttcatcacgccgcatgcattcgctgacttggagaac
ctccgcgccttgcacctgaacagcaaccgtctaatccggatagccaatgacaccttcagc
ggcatgtccaaactgcaccacctcatcctcaacaacaaccagctgacgttgatccacctg
ggggccttcaatgacctgctggccctggaggagctggacctgtcctacaacaacctggag
tccatcccctgggaggctatccagaggatgaccagccttgccaccctcagccttgaccac
aacatgatcgactacattcctgaggggaccttctctcttctccaaaagctcaaccgcttg
gatgtgacctctaataagttacagaaactccctcctgatcctctgttccagcgggcccag
gttttggccacatctgggatcatgaactctccctcgttcgcgctgagctttggtgggaac
ccactgcactgcaactgtgagctgctgtggttgaggcgcctgagccgagaggatgatctg
gagacatgcgcctcaccgcagcatctctccggacgctacttctggtctatacctgaggag
gagttcctgtgtgaacctcctctcatcacccggcactcccatgagatgcgggtgctggaa
ggccagagggtggtcttgaggtgcaaggcccggggggaccctgagcctgccatacactgg
atctccccagaggggaagctggtggcaaactcctcccgaacgcttgtgtacaccaacggc
accctggatattctgatcagcacagtgaaggacacaggatccttcacctgcatctcgtcc
aacccggcgggtgaggcacatcagactgtggagctgctgattatcaaactcccacacatc
tccaacagcaccaacaacatccaggagcctgaccctggctcctcggacatctccacatcc
accagggctggggccaacggcagcaaccacactggagacaccaaaactagcacagataaa
cgggtggtcatcgccgaggccacgtcctccactgcgctgatcaagttcaacttccagagg
aatatacctgggatccggatgttccagattcagtacaatggcagttatgatgactctctc
gtttacagaatgattccccccacaagcaaaaacttcctagtcaacaacctggctgctggg
acgtcgtatgacctgtgtgttctggccatctacgacgacggaatcacttccctcaccgcc
acccgcgtggtgggctgtgtccagttcaccaccgagtctgagtacctgcgctgtcacttc
atgcagtcccagttcctgggaggcaccatgatcatcatcatcggtggcatcatcgtggcc
tctgtcctcgtcttcatcatcatcctcatgattcgctacaaggtctgcaacaccactaac
tcgggcaaaggcacccttgtcaccaatgtccactcacagaccaacggggcgcagtctcag
gggtgcagtgtcacaccttctgtgtccaagcaggccatgggagggtcagacggagggggt
ggaggatgtctaaaggctgttggccacgcgtcagacacgctaacgcactcgtccgagacc
tctctcccagactgctctactgctacgtccctggtgacccaaagctggaacacacctgga
tcctcagggtctctgaagccaaagcgcaagcctgcaccaaagccctacgctgctgctgcc
acccctgagcccaatatagaggccctccccaacgctgagacccagaataccaaccgcaac
aactccacggctctggagcagccgtgcgccccagtattccactcccccctacccttttcg
agtgtcaaggacacccccatattgagacgtgcacaccccagaccctcctccaagtacctg
accttaccggtggaaggggtgagggccaaacgtaggtactctctaaacgaggactcgtcc
aagcaccactgctatgttgggacaacacaatttgggaatatgtggtctaagcggagtatg
tccatgaacgggattgtacttcaacaggaagacatagacagtgtgaaggccaccttttcc
agttcagagtggattttagaaagcactgtgtga
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