Oncorhynchus tshawytscha (Chinook salmon): 112256828
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Entry
112256828 CDS
T05605
Name
(RefSeq) EH domain-containing protein 4
KO
K12477
EH domain-containing protein 4
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112256828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112256828
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
otw04147
]
112256828
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
112256828
Exosome [BR:
otw04147
]
Exosomal proteins
Proteins found in most exosomes
112256828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5600
EF-hand_4
Dynamin_N
EHD_N
MMR_HSR1
EF-hand_1
EF-hand_7
GTP_EFTU
AAA_16
AAA_22
TsaE
Motif
Other DBs
NCBI-GeneID:
112256828
NCBI-ProteinID:
XP_024286128
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All DBs
Position
LG08:complement(19538249..19585972)
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AA seq
546 aa
AA seq
DB search
MFSWVNKEQGGRNKDGEMYQTVTEGLQQLYSKKLFPLEETYLFHDFHSPALEAADFQSKP
MVLLVGQYSTGKTTFIRYLLEQDFPGMRIGPEPTTDGFIAVMYGENEGIVPGNALVVDPK
KPFRKLNAFGNAFLNRLICSQMPNQVLQGISIIDTPGILSGEKQRVSRGYDFSEVLRWFG
ERVDRIILLFDAHKLDISDEFSEAIKAFRGQDDKIRVVLNKADQVDSQQLMRVYGALMWS
LGKVINTPEVVRVYLGSFWAKPLQNTENRRLFEAEAQDLFKDIQGLPRNAALRKLNDLIK
RARLAKVHAYIISYLKKEMPSLFGKEKKKEELIMRLSEIYTILQREHHISPGDFPNVVKM
QEQLQHYDFSKFPSLKMKLIESVDKMLANKISGLMTMIRDEESMAPPAMVSGGAFEGSQD
GPFGQGYGEGISAGSDCEDWIVSRDKHKYDEIFYSMNPINGKISGVNAKKEMMNSSLPNT
VLGKIWKLADCDKDGMLDDEEFALAQHLIKVKLEGYELPTELPHHLVPPAHRKNEVADIL
YNHDEN
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgttcagttgggtgaataaggaacaaggaggcagaaacaaggacggcgagatgtaccaa
actgtgacggagggtcttcaacaactgtactcaaaaaaattatttccattggaagaaacc
tatcttttccatgatttccactcacctgcgttggaggcagcggattttcagagcaagcca
atggttctactggttggacagtattctacggggaagacgacgttcataaggtacctgctg
gagcaggacttcccaggcatgcggattggcccagagcccacaacggatggcttcatcgct
gtcatgtacggggagaacgaggggattgtccctggtaacgctctggtggtcgaccccaag
aaacccttccgtaaactcaacgcttttggaaacgctttcctcaacaggttaatctgctcc
cagatgcctaaccaggtcctccagggcattagtataattgacacaccaggaatcctgtct
ggagagaagcaacgcgttagtcgaggctatgatttctctgaggtgctgcgatggttcgga
gagcgggtggaccgcatcatcctgctcttcgacgcccacaaactggacatctcagacgag
ttctctgaggccatcaaggctttccgtggccaggatgacaagatccgcgtggtgctgaac
aaggctgaccaggtggacagccagcagctgatgagggtctacggagctctgatgtggtcc
cttgggaaagtcatcaacacacccgaggtggtgagggtctacctgggctctttctgggcc
aagcccctgcagaacacggagaaccggaggctctttgaggcagaggcccaggacctcttc
aaggacatccagggcctgccccggaacgctgccctacgcaaactcaatgacctcatcaaa
cgagctcgacttgctaaggtgcatgcctacatcatcagctacctgaagaaagagatgccg
tcgttgtttgggaaggagaagaagaaagaggaactgatcatgagactttctgagatctac
accatactgcagagagagcaccacatctcccctggagactttcccaatgtcgtcaagatg
caggagcagctccagcactatgacttcagcaagttcccctccctgaagatgaagctgatt
gagtctgtggacaagatgttggctaacaagatctccggcctgatgaccatgatccgtgac
gaggagagcatggcaccccccgccatggtgagcggcggggcctttgagggctcccaagac
ggtcccttcggccagggttacggagagggcatcagcgccgggtctgactgcgaggactgg
atcgtaagccgtgacaaacacaagtacgatgagattttctactccatgaaccccatcaac
ggaaagatcagtggagtcaacgccaagaaggaaatgatgaactccagtctgcccaacaca
gtcctggggaagatctggaagctggcggactgtgataaagacggcatgctggatgacgag
gagtttgccctggcgcagcacctgatcaaggtgaagctggaggggtacgagctgcccacc
gagctacctcaccacctggtgcctcccgcccacaggaagaacgaggtcgctgacatcctc
tacaaccatgacgagaactaa
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