Oncorhynchus tshawytscha (Chinook salmon): 112256837
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Entry
112256837 CDS
T05605
Name
(RefSeq) rho GTPase-activating protein 5
KO
K13709
Rho GTPase-activating protein 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112256837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112256837
Membrane trafficking [BR:
otw04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
112256837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP_pG1_pG2
RhoGAP
RhoGAP-FF1
FF_RHG35_4th
Ras
FF
GTP_EFTU
NOG1
Cdh1_DBD_1
Motif
Other DBs
NCBI-GeneID:
112256837
NCBI-ProteinID:
XP_042181236
LinkDB
All DBs
Position
LG08:complement(18955028..19014487)
Genome browser
AA seq
1496 aa
AA seq
DB search
MAKNKEARPPTYAVSVVGLSGTEKEKGNCGVGKSCLCNRYVCSNADGYYTEHTSVLSTID
FGGRVVNNDHFLYWGEVPHRSDDGLECKIQIIEQTEFIDDQTFLPHRSTNLQPYSKRAAA
FKLQSAEKLMYICTDQLGLEQDFDQKQMADGKLNIDGFLLCIDVSKGCNRKFEDQMKFVN
SLYSQMVKSKKPIVIAATKCDECMEQYLRDLQVFAASKKNLLVVETSARLRINVDLCFNA
LTQQMDKTRGKPKIIPYLEAYKVQRQLVATVSDKFEKRIVQTVRDYHTSWKTVSNMLKNH
PDYEEYINLEGTRKARNTLNKHIEQLKQEHIWKRREEYFSSLPKILNNLLNNLEELENLS
WSEAQSILKSRAEFHFWFVVLEHTPWDETDQIDKVNDRRVPFDLLKTLEGEKIFQNHVQH
LFSEKMRLEMKNRFKKTLDRVHFISPGQPWEEVMCFVMEDEAYKYISESDHRDVYSQHQQ
EIVERAKEEFQEMLFEHAELFYDLDLNATPSCDKMSEIHTVLNEEPRYRALQKLAPDRES
LLLKHIGFVYHPTKETCLSGQSCVDMNVEQVLANRLVQLDHGRSNLYYNSANIDKVNLCL
LGREGLAQELANEIRAQSTDEEYTLDGKIYELELLPVDVNSTLLFSHTWASTFKPHGIFC
VFSSIESLNCIGDCVGRIRAEIAQNRRERYAPPLPFILILANQRDSVCKNMPILRHQGQQ
LANKLQCTFVDIPSVTFPRKFNEFQIKQALRGVLEGLKHNFDVMSPLPSIKDMSETDLRI
VMCAVCGDPFSVDLILSPFLDSHSCSAGQPGQSNTLILNKIIGDSRRRIHVTVLSYHSSI
GIRKDELVHGYILVYSAKRKSSMAMLRAFLAEVQDVIPVQMVAVTDSQADFFENDPIKDL
MTEGEHIATEITAKFTALYSLSQYHRQTEVFTPFFNEVLEKKSSIESAFMFDSSRDCTGA
SEDVFPQSPHSHSPAYSYYPDSEDDTEAPPPYSPIGDDVQLLPTLSERGKCRIDLEGNEY
PVHSTPVGDQERNHRVPPPVRPKPILSKPNVKKLDPNLLKTIEAGMRSNRRQRSPMAQGE
DVEASDNYADPVDTLLKSKGFTDNIYAVPEDTHSRTLKMLHVSHGDEENGFDHKAQASRR
PTKYKHRSKILFSKTKMYHRRVHSDVSDDESGPAMQKKKKGRAHRGSEEDPLLSPADPWK
GGIDNPAITSDPEQDDMKKKKKKTPKTKEPKKPKSKPTKPLYPPTRRNWESHYFGVPLQN
LVTPDRPIPLFIEKCVDYIERTGLTTEGLYRVSGNKTDQDNIQKQFDQDHSMDLIVMDVA
VNAVAGALKAFFSDLPDPLIPYTLHPELVEAAKIVDHIERLQVLKEIVRKFPAVNYEVFK
YVITHLNRVSQQSKTTLMTADNLSICFWPTLMRPDFENKDTLSTTKLNQSVIESFIQQSH
YFFYSGDIQESSSTESTPPPHHCHSMVEALRPLQLPPPLQPQQIQHSMSLQPEPLI
NT seq
4491 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaacaaggaggcacgccccccaacatatgctgttagtgttgtcggcctctca
gggacagagaaggagaagggcaattgtggcgtgggcaagtcctgcctatgcaacagatat
gtgtgttccaacgctgacggctactacactgagcacacttctgtgttgagcacaattgac
tttggaggtcgtgtggtgaacaatgatcacttcctctactggggtgaagtgccacaccga
agcgatgacgggctcgagtgtaaaattcaaattattgaacaaaccgagttcattgatgat
cagactttcttgccacatcgcagcacaaacctgcagccctatagtaaaagggctgcagcc
ttcaagctacagtctgctgagaagctgatgtacatttgcaccgaccagcttggcctggaa
caggattttgatcagaagcagatggccgatgggaaactcaacattgacggttttttattg
tgcatagacgtgagcaaaggctgcaataggaaatttgaggatcagatgaaatttgtcaac
agcctttattctcaaatggtcaaatcgaaaaagcccatcgtcattgctgcaactaaatgt
gacgagtgcatggagcagtatctaagggaccttcaggtgttcgctgcaagcaaaaagaac
ctcctggtggtagaaacgtcagctcgattgagaatcaatgtagacctctgttttaacgca
ttgacccagcagatggacaaaacacgaggcaaacccaaaatcattccttatttggaggcc
tataaagttcagcgacaattagtagccacagtgtccgacaagtttgaaaagaggattgta
caaaccgtcagagattatcacacaagttggaaaacagtgagtaacatgttgaaaaaccac
cccgactatgaggaatacatcaacttggaaggcacccgaaaagctagaaacaccctcaac
aagcacatcgaacagctgaagcaggaacatatctggaaaaggagggaagaatacttctcg
agcctgccaaaaattctcaataacttgctcaacaacttggaagaactcgagaacctgagc
tggtcggaggctcaaagtatcttgaagagcagggctgagtttcatttctggtttgtggtg
ctggagcacactccgtgggatgagacggaccaaattgacaaagtcaacgacagaagagtg
ccctttgatctccttaaaacgttggaaggggagaagatttttcagaaccatgtccagcat
ctgttctcagagaaaatgcggttagaaatgaagaatagattcaagaagacattggataga
gtccatttcatcagccctggacaaccctgggaagaggtcatgtgttttgtcatggaggac
gaggcctacaagtatatcagtgaatctgatcacagggatgtttacagccagcatcagcag
gaaatagttgaaagggccaaagaggaatttcaggaaatgctttttgaacacgcagagctg
ttttatgaccttgatttaaatgccaccccaagctgtgacaaaatgagcgagatccacact
gtgctcaacgaggagcccagatacagagctctgcagaaactggcccctgacagggagtca
cttcttctcaagcacatcgggttcgtctaccaccccacgaaggagacgtgtctgagcgga
cagagctgcgttgacatgaatgtcgagcaggtactggctaacaggctagttcagctggac
catggtcgctctaatctctactataacagtgccaacattgataaagtcaatttgtgtctc
ttgggaagggagggtctcgcacaagaacttgcaaatgaaatccgagcccagtccacagac
gaggagtacaccctggatgggaaaatctatgaactggagcttctgcctgttgatgtcaac
tcaacgttgctctttagtcatacgtgggcgtcaaccttcaaacctcacggaatcttctgt
gtcttcagctccatagagtcgctaaattgtattggcgactgcgtagggagaatcagggca
gagattgcacagaacaggagggagagatacgcaccgccattgccattcattctaatccta
gcaaaccagagagacagcgtttgcaaaaatatgcctatattaaggcatcagggccaacag
cttgcaaataagttacagtgcacctttgtagatataccttctgttacctttccacggaag
tttaacgagttccaaattaaacaggctctcagaggagtattagaaggactaaagcacaac
tttgatgtgatgagccctctgccgtccatcaaagacatgtcagagaccgacttgaggatt
gttatgtgtgctgtgtgtggggatccatttagtgtagacctcatcctctcacctttcctg
gattcacattcctgcagcgcagggcaacctggccaaagtaacactctgatcctcaacaaa
atcattggcgacagtcgcagaagaatacatgttactgtcctctcctaccactcctccatc
ggaatcaggaaggacgagctcgtccatggatacatcctggtctactcagcaaaacgcaag
tcctccatggcgatgctcagagctttcctggcggaggtccaagatgtcatccctgttcaa
atggtggccgtcacagacagtcaagcagacttctttgagaatgacccaatcaaagacctc
atgactgaaggagagcacatcgctacagagataaccgctaaattcacagctctctactct
ctgtctcagtaccatcgtcagacggaagtcttcacgccgttcttcaacgaggtgctagag
aagaagagcagcatcgagagcgccttcatgtttgacagctctcgagactgcacgggtgcg
agtgaagatgtcttcccccagtctccccacagccattcccctgcttacagttactaccct
gactcagaggacgacaccgaggctcctccaccttacagccccatcggggacgacgtgcag
cttcttccaacgcttagcgaacgtggaaagtgcaggatcgatctggaggggaacgagtac
cctgtccatagcacacctgtcggtgaccaagagcgcaaccacagagtgcctcccccggtt
agacccaagcctatactatccaagcccaacgtcaagaagttggaccccaatctcctgaag
accattgaggctgggatgaggagcaacagacgacaacgcagccccatggcccaaggtgaa
gacgtcgaggcgtccgacaattacgcagaccccgtagacactctcctgaaatcaaagggc
tttaccgacaacatctacgctgtcccggaggacacccacagcaggaccctcaaaatgctt
cacgtctcacacggggacgaggagaacggcttcgaccacaaggcgcaggccagcaggagg
cccaccaagtataagcaccgctccaaaatactcttcagcaaaaccaagatgtaccacaga
cgtgtccactccgacgtcagcgatgatgagtctgggccggccatgcagaagaagaagaag
ggcagggcccatcggggcagtgaggaagaccccctgctgtcccctgctgacccctggaag
ggagggatagacaaccctgccatcacctccgatccagagcaggatgacatgaagaagaaa
aagaagaaaacgccaaagacaaaggaacctaaaaagccaaaatccaagcccacaaagcct
ttgtaccctcccacacggaggaattgggagagccactactttggtgttcccctacagaat
ctggtcaccccggaccggccaatccccttgttcattgagaagtgtgtggactacattgaa
cgcactggacttacaacagagggcctgtatcgcgtgagtgggaacaagactgatcaagac
aatattcagaagcagtttgatcaagaccacagtatggacctgatagtgatggatgtggct
gtgaatgctgtggcgggggctctgaaggcctttttttctgacctacctgaccctctcatc
ccctacaccctgcacccagagctggtggaggcagccaaaattgtggaccacatagaaaga
ctccaagtgctgaaagaaatagtgaggaagttccctgcagtgaactacgaggtgtttaaa
tacgtcatcactcacctgaacagggtgagccagcagagtaagaccaccttgatgacagcc
gacaatctatccatctgcttctggcccacactgatgcgtcccgactttgagaacaaggac
acactctccaccaccaagctcaaccagtctgtcatcgagtccttcatccagcagagccac
tacttcttctacagcggagacatccaggagagctccagcaccgagagcaccccaccaccc
caccactgtcacagcatggtggaggccctgaggcccctgcagctgccccctcctcttcag
ccccagcagatccagcacagtatgtccctgcagcctgaaccactcatatag
DBGET
integrated database retrieval system
