Oncorhynchus tshawytscha (Chinook salmon): 112256880
Help
Entry
112256880 CDS
T05605
Symbol
pals1a
Name
(RefSeq) protein PALS1
KO
K06091
MAGUK p55 subfamily member 5
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04519
Cadherin signaling
otw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
112256880 (pals1a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
112256880 (pals1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112256880 (pals1a)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
PDZ domain-containing proteins
MAGUK family proteins
112256880 (pals1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Guanylate_kin
L27_N
PDZ
SH3_2
PDZ_6
L27
SH3_1
PDZ_2
MMR_HSR1
CSN4_RPN5_eIF3a
SH3_9
YhaL
Motif
Other DBs
NCBI-GeneID:
112256880
NCBI-ProteinID:
XP_024286203
UniProt:
A0A8C8CE90
LinkDB
All DBs
Position
LG08:14953638..15001561
Genome browser
AA seq
675 aa
AA seq
DB search
MITTSYTNGHMTESDGRGVEANQEEPQQWHREMAVDCPGDLGARTLPVRRSAQLERIRQH
QEDRRRKEEEGKNRQELDLTASIRLKKLSQNPKVGIDNPTFDPIEGPGGPLGLPPNLGAP
TLLELEELLMSLKQVQHCLSDGQSQEDVELVLQLVQKTDFQKAFNIHNAVAQHMNRPSPP
FPHTDRAQGLAHEVQSMVHNSQHKEGLELNTLLSSPHVQAVLLAHDCVAEQEMQLEPLTP
DPCEALTQWGGETVKIVRMEKAMDIPLGATVRNDMDSVVISRIVKGGAAERSGLLHEGDE
VLEINGVEIRGKDVNEVFDILAEMHGTLTFILIPSSQNKPPPIKETVVHVKAHFDYDPSD
DPYVPCRELGLCFQKGDILHIISQDDPNWWQAYRDGDEDNQPLAGLVPGKSFQQQREAMK
QTIEEDKEPEKSGKLWCAKKNKKKRKKLLYNVKQNDDNDSEEILTYEEMALYHQPANRKR
PIALIGPPNCGQNDLRQRLLSSQPDRFGGAVPHTTRNRRDVEVSGRDYHFVSRQAFDMDA
TAGKFIESGEFEKNLYGTSTDSVRQLINMGKICLLCLHTQSLKTLRSSDLKPYIIFIAPP
SQERLRALLTKESKNPKPEELRDIIEKAREMEQNFGHLFDAAIVNTDQDKAYQELLRLIN
KLDTEPQWVPSSWLR
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgataaccacatcctatacgaacggtcacatgactgagtcagacggaagaggagttgag
gccaaccaggaggagccccagcagtggcacagggagatggcggtggactgcccgggggac
ctgggtgcccgtaccctgcctgtgaggcgctctgcccagctggagaggatccgtcagcac
caggaagaccggaggaggaaggaggaagagggcaagaacagacaggagctggatctgacc
gcctccatacggctcaagaagctgtctcagaaccccaaggtgggcatcgataaccccacc
ttcgaccccatcgagggccctggagggccactgggactgccacccaacctgggggccccc
actctactggagttggaggagctgctgatgtccctgaagcaggtgcagcactgcctgtct
gacggccagagccaggaggacgtggagctggtgctgcagctggtccagaagactgacttc
cagaaggccttcaacatccacaacgctgtggcccagcacatgaacaggcccagcccaccc
ttcccacacacagaccgcgctcagggcctggcacacgaggtccagtctatggttcataac
agccaacacaaggagggtttggagctcaacaccctgctctcctcaccacatgtccaggcg
gtgcttctggcccatgactgtgttgcggagcaggagatgcagctggagcccctgacccct
gacccctgtgaggctctcacccagtggggaggggagactgtcaagatagtccgcatggag
aaggccatggacatcccactgggtgcgacagtgcgtaacgacatggacagcgtggtaata
agccgcatcgtgaagggcggtgcggcggagcgcagcggactgctgcatgaaggagacgag
gttctggagatcaacggagtggagatcagagggaaggacgtcaacgaggtctttgacatc
ctggccgaaatgcacggcaccctgaccttcatccttatccccagctcacagaacaaaccc
ccgcccatcaaagagactgtggtccatgtgaaggctcactttgactacgacccgtctgat
gacccctacgtgccgtgtagggaactgggcctgtgcttccagaagggagacatcctccac
atcattagccaggacgaccccaactggtggcaggcctacagggacggagacgaggacaac
cagcccctggccgggctagtaccaggcaagagcttccagcagcagagagaggccatgaag
cagaccatagaagaggataaagagcctgagaagtcgggaaagctgtggtgtgctaagaag
aacaagaagaagaggaagaagctcctttacaacgtcaagcagaatgatgacaacgacagt
gaggagatcctgacctatgaggagatggcgctctaccaccagccagccaatcgaaagcga
cccatcgccctgattggtcctcccaactgtgggcagaacgacttgagacagagactgctg
tccagccagccagacagatttgggggagcagtcccacacacgacacggaacaggcgtgat
gtagaggtgagtgggagagactaccactttgtctcccgccaggcctttgacatggacgcc
actgcggggaagttcattgagtccggagagtttgagaagaacctgtacggaaccagcacc
gactctgtccgccaactcatcaacatgggcaagatctgcctgctctgtctgcacacacag
tcgttgaagactctgcgtagctcggatctgaagccttacattatcttcatcgctcctccc
tcccaagaacggttgcgagccctcctgaccaaagagagcaagaacccaaagccagaggag
ctgcgtgacatcatcgagaaggcccgtgagatggaacagaactttggccacctgtttgat
gcagccatcgtgaacacagaccaggacaaggcctatcaggagctgctgaggctgatcaac
aaactggacacagagccacaatgggtcccctcctcctggctacgctaa
DBGET
integrated database retrieval system
