Oncorhynchus tshawytscha (Chinook salmon): 112256892
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Entry
112256892 CDS
T05605
Name
(RefSeq) metastasis-associated protein MTA1-like
KO
K11660
metastasis-associated protein MTA
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
112256892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112256892
03036 Chromosome and associated proteins [BR:
otw03036
]
112256892
Transcription factors [BR:
otw03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
112256892
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
112256892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTA_R1
BAH
ELM2
GATA
Myb_DNA-binding
Myb_DNA-bind_7
Mod_r
Motif
Other DBs
NCBI-GeneID:
112256892
NCBI-ProteinID:
XP_042181197
LinkDB
All DBs
Position
LG08:complement(13794461..13874208)
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AA seq
636 aa
AA seq
DB search
MAANMYRVGDYVYFENSSSNPLLIRRIEELNKTANGNVEAKVVCFYRRRDISSTLIALAD
KHAREMEEEMENPELNPVDLPEKQKHQLRHRELFLSRQLESLPATHIRGKCCVTLLNETE
ALKSYLDREDAFFYSLVYDPQQKTLLADKGEIRVGNKYQADITDFLKEGEEDGRDLAKLE
EKVWDPSSPLTEKQIDQFLVVARSVGTFARALDCSSSVRQPSLHMSAAAASRDITLFHAM
DTLDKTGYDMTRAIAALVPQGGPILCRDEMEEWSASEANLFEEALEKYGKDFTDIQQDFL
PWKSLTSIIEYYYMWKTTDRYVQQKRLKAAEAESKLKQVYIPNYNKPNPNQLSANSVKPG
IVGGLVNGSGAAAGATVGVGGVPGVLPVPPGQTPGLGRACESCYTISSYQWYSWGPPNMQ
CRLCASCWTYWKKYGGLKMPTRLEGERPGPNRNNMSPHGVPMRHSGSPKFAVKTKQAFYL
MTTQVTRAARRVCQDIIRPRFLARHPYLPLNTAQIKQECALRLPDEPKKPLPLKPVDRKP
LESVVRYLEAHPCPPKPDLPRGQTVTTGSLTPIKSTPNILNNGSPTILGKRTYEQHNGMD
GTKPKAPQWDIMAKRTAEPGRTASAPMQQDEVHELD
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaacatgtaccgggttggagattatgtttattttgaaaactcatccagtaac
ccactgctgatccggcggatagaagagctcaacaagacggccaatggaaacgtggaggct
aaagtggtctgtttctaccgacgcagagacatctcctcaacgctcatcgccctcgctgac
aaacacgcacgagagatggaggaggagatggagaacccagagttgaacccagttgacctg
ccagagaaacagaaacaccagctgagacaccgagagctgttcctgtcccgccagctagag
tcactacccgctacacacatcagggggaagtgttgtgtcactctgctgaacgagacggag
gctctgaagtcctatctggaccgagaggatgcgttcttctactccctggtctacgacccc
cagcagaagactcttctggctgataaaggggagatcagggtggggaacaagtaccaggca
gacatcacagacttcctcaaagagggtgaggaggatggcagggacctggccaagctggag
gagaaggtgtgggaccccagcagtcccctcacagagaaacagatcgaccagttcctggtt
gtggctcggtcagtgggtacttttgcgcgggctctagactgcagtagttctgtccggcag
cccagtcttcacatgagtgctgctgctgcctctagagacatcaccctgttccatgccatg
gacaccttggataagacgggttatgacatgacgcgggccatcgctgccctggttccccag
ggaggacctattctctgccgggacgagatggaggagtggagcgcctccgaggccaacctg
tttgaagaggccctggagaaatacggaaaagacttcacagacatacaacaggactttctg
ccctggaagtccctgaccagtatcatagagtattactacatgtggaagaccacagacaga
tacgtacagcagaaacggttaaaagcagcagaggcagagagcaagttgaagcaagtctac
atccccaactacaacaaacccaaccccaaccagctgagtgctaacagtgtgaagcctggc
attgtgggaggcctagtgaacggctctggggctgcagctggagccacagtcggagttggg
ggtgtcccgggggtgctaccagtgcccccaggacagaccccaggactgggccgtgcttgt
gagagctgctacaccatcagctcgtatcagtggtactcgtggggtccccccaacatgcag
tgtcgtctgtgtgcctcctgctggacctactggaagaagtatggaggactgaagatgcca
acaagactggaaggagagaggcctggacccaaccgcaacaacatgtctccccacggggtt
ccaatgcgtcacagcgggagccccaagtttgctgtaaagacaaaacaggccttctacctg
atgaccactcaggtgacgcgcgccgcccgacgcgtctgtcaggacatcatcagaccacgc
ttcctcgccaggcacccctacctccccctcaacacagcccaaatcaaacaggaatgtgcg
ctgcggttgccagacgagcccaaaaagccattgccactgaagccggttgacaggaagcct
ctggagtcagtggtccgatatcttgaggcccacccgtgcccacccaaacctgacctcccg
cgcggccagaccgtaaccacgggcagcctgacacccatcaagtcgacacctaacatcctc
aacaacggatcacctaccatcctgggaaaacgcacctacgagcagcacaacggcatggac
ggaacaaagcccaaagccccacagtgggacatcatggccaagagaacagctgagccaggc
aggaccgcttctgcccccatgcagcaggatgaggtacatgaactggactga
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