Oncorhynchus tshawytscha (Chinook salmon): 112256924
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Entry
112256924 CDS
T05605
Symbol
vsnl1b
Name
(RefSeq) visinin-like protein 1b
KO
K19936
visinin-like protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112256924 (vsnl1b)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112256924 (vsnl1b)
Membrane trafficking [BR:
otw04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
112256924 (vsnl1b)
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
EF-hand domain-containing proteins
Calcium binding proteins
112256924 (vsnl1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
SPARC_Ca_bdg
Caleosin
Dockerin_1
IL3
WEF-hand
p25-alpha
MATalpha_HMGbox
Motif
Other DBs
NCBI-GeneID:
112256924
NCBI-ProteinID:
XP_024286278
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All DBs
Position
LG08:complement(11980100..11989113)
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AA seq
191 aa
AA seq
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MGKQNSKLTPEVMEDLVKSTEFNEHELKQWYKGFLKDCPSGRLNLDEFQQLYIKFFPYGD
ASKFAQHAFRTFDKNSDGTIDFREFICALSITSRGSFEQKLNWAFNMYDLDGDGKITRVE
MLEIIEAIYKMVGTVIMMKMNEDGLTPEQRVDRIFSKMDKNNDDQISLDEFKEAAKSDPS
IVLLLQCDMQK
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaacagaacagcaagctgacccctgaggtgatggaggacctggtgaagagcaca
gagtttaacgaacacgagctgaagcagtggtacaaaggcttcctcaaagactgccccagt
ggtagactgaacctggacgagtttcaacaactctatatcaagttcttcccgtacggcgat
gcgtcaaagtttgcgcagcacgccttcaggaccttcgacaagaacagtgacggcaccatt
gacttccgagagttcatctgtgccctgtccatcacatcgcgtggcagcttcgagcagaaa
ctcaactgggccttcaacatgtacgatctggatggagacggcaagatcacccgggtggag
atgttagagatcatcgaggccatatacaaaatggtgggcactgtgatcatgatgaagatg
aacgaggatggcctgacaccggagcaacgggtagacaggatcttcagcaagatggataag
aataacgatgaccagatctcattggatgagttcaaagaggcggccaagagtgatccgtcc
atcgtgctcctcttgcagtgtgatatgcagaagtga
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