Oncorhynchus tshawytscha (Chinook salmon): 112256925
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Entry
112256925 CDS
T05605
Name
(RefSeq) tudor domain-containing 6
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
otw03036
]
112256925
Chromosome and associated proteins [BR:
otw03036
]
Eukaryotic type
Gene silencing
piRNA pathway
112256925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
Agenet
SGF29_Tudor
SAWADEE
Motif
Other DBs
NCBI-GeneID:
112256925
NCBI-ProteinID:
XP_024286279
LinkDB
All DBs
Position
LG08:complement(11929948..11942453)
Genome browser
AA seq
1894 aa
AA seq
DB search
MCSIPGLPIPGSQVTVLITRVNLNPICSLVELWGNFDQERQHAYQQMRRVQIPRQRFCES
EGNPGDLCLAHLNGTWHRARIISRHGHHYNVFLIDEGRAHVATNNTLAWGQNDCFLLPPE
VEFCVLANVSPLSHENKWTPTASDFLDSLCGKTVNGMVQDVLMPDRTVLLYIPIINKHMY
EVGFARKLPSDKFKQLVLSSLNFPKSQVSSTETLPPTVSHKRTDAGREIEKFQQFFYPEL
LTDFIETVEVTEVINPQRIFCKLSIFSQELKKLSEQINEYYEGRSTFCKARQTASGAPCA
ARGSNGKWYRSLLQQDIGSESAVEVLLVDNGKTDFVHVGDIRPLAAKFFRMPVVTYVCSL
HGIEDRGIGWTVDEIKYLKSVLLHKTVIAKFEYHNLSEGINCVTLYGDDNVNINNLFGVK
ERCLLESERPPPRVTEKSFATDIQNSVHPLTTPHFPSATETVLNEHWFQVGITMEVKVSC
IESPAKFWCQMAQESTSLQILMQEMQYHYTSSPPQQIDGDICVALDHDNGMWYRARIVEN
DRSPHVDVRFIDYGQTRRVSLQDLRPLDPVFRRLKTQAFQCFLQNLNTPTSPVPAEWSDA
ASSEFQKFVDSTADSNVGLKCTVHAVMRDTQGLVINMVDIETPVQSACKLLVQKGVKAPA
PLKSPPLSSAPPDTKNFSLHNIEVGGKEKVWITSAKSVAHFYGQLERNSHVNDKLTKDLQ
HFCHQPLQSTNCPQSLETVCFAKYTDNQWYRGQIKATHPTLEVHFVDYGDTVTLSQSDIL
PCPVEAVSLMSVPVQAVPFGLFGIPEDVSQEVNRWFEKHATDLRFTITAVAKDSGGKLLV
ELYDGTTHINEMVREKLKEVRPGKEIILVQSPSLSSKLSTTSRCADQFQTKLNLPEYVQM
PTSQDWAARGTVIKHSSTAMCFTSPQRRVGQSTPQQSLLDQPEKKPMVEHDGQMCRFSKL
TDLPSRHLKPGLVTEVYVSHCNSHSSFFIQLTKDEDDIFSLVEKLNGSQSSCDATPVDLN
ELQLGDLVNAEYPEDSSWYRAVVRRKPGNGTVHVEFIDFGNEAIIPSLKVKQLDKQFIEY
PRFSIHCVLGRITNANNKETWEEDVTSMIKKATTTENAEKKLACAFMKETGSVWEVSLED
QGIVLAHSLVEASQTGRADVSQLSCSGENTIPLLYKKPSVSQNQALDVYASSIVEPNYFW
CQHANSEELYRISRIVQEFVNSALQDPVLMDTLNPRSPCLAFFAEDNQWYRAQIVHKTND
LFTVLFVDYGNESEVDLKAIRSIPPPLLESAPQAFLCSLAGVEHPEGAWDNNTVDEFYQL
IVDKPLKVTVQKMYNDLESLPTQYQVKVECEEHVINDLMRSYLHCSDLHVHSKTECADEL
FSSDMTISNETLNRSEYKRLTQEITPKLNSTEAPVMDRSPSTTQCSGDTLAVRTISYNGL
AGVSSSGSNVPSESVPKLETLPKRSIKPGWVSDVYVSQCNSPSSFFVQLVEDEKCLFSLV
ESLNSDQSDGVALKNVVNLQPGDLVNSEFPDDCSWYRAVILETNGEDKIHVQYIDFGNEA
FISPLKVCRLDTQFLEHPRFSIHCSLSGLADTKYKGLEQEICCQFKKVAGADSARKWECK
FIKDTGSTWEVCLDQNIILTDSLNMCCSAGDSTHLDRQSPSSGSLPSQIERIDREHNTQL
QFWKLDIVLGQTLDVYASSIAGPGYFWCQYANSEELAEISKVCQLIGNSEHKDTVLMSTL
SPGSLCLALFAEDKQWYRAQIVSKMDVISVVFVDYGNESETDLKSLKSVPPQLLEHPPQA
FLCSLAEFENSEGSWDDNALDGFHELLADKPLKVTVQSMDNNIKLPIPQYQVKVECEELI
VNDFMKTCWRGSPTESQSEEAANHCNCQREETDD
NT seq
5685 nt
NT seq
+upstream
nt +downstream
nt
atgtgttccattcctggattgccaattccaggatcccaagtcacagttctcattacaagg
gtaaacctaaatcctatctgttctctagtggaattatggggaaactttgatcaagaaagg
caacatgcttaccagcaaatgagaagggttcagattcccagacagaggttttgtgaatca
gaaggaaaccccggagacttgtgtctagctcatctgaatggaacctggcacagagctagg
atcatttctagacatgggcatcattacaatgtgtttctcattgatgaagggagagctcat
gttgctacaaacaacaccttagcatggggtcagaatgactgttttcttttacctccagaa
gtggagttctgtgttcttgccaatgtatcccccttatcccatgaaaacaaatggactcca
acagcctcagattttttggattctctttgcggcaaaacggtcaatggaatggttcaggat
gtattgatgccagacagaacagtcctcctttatattccgatcattaacaaacatatgtat
gaagtcggctttgccagaaaacttcccagtgacaagttcaaacaacttgttctatcgtct
ctgaactttccaaagagtcaggtctcctccacagagacattgccacctacagtgtcacac
aaacggactgatgctgggagagaaattgagaagtttcaacaattcttctatccagaactg
ctaacagacttcattgagactgtggaagtcacagaggtgataaacccacagcgtatcttc
tgcaaactctcaattttctctcaggagctgaagaaactctctgagcagattaatgaatac
tatgaaggaagatctactttttgcaaggccagacagacggcctcaggcgctccatgtgca
gcaagggggagcaatggcaagtggtatcgatctctgctacagcaggacattggatcagag
agtgctgtggaagtactacttgtcgataatgggaagacggactttgtccatgtgggtgac
atcagaccactggctgccaagttcttcagaatgccagttgtaacttatgtttgctccctc
cacggtattgaggacagaggcattggatggacagtggatgaaatcaagtatctgaaatct
gtgctgctgcacaagactgtcattgccaaatttgaatatcacaacttgtcagagggcatc
aactgtgtgacactctatggagacgacaatgtaaacatcaacaatctttttggagtgaaa
gagagatgtcttctggagtcagagaggcctccaccacgagtcacagagaaaagctttgcc
acagacatacaaaacagtgtgcatccccttaccactccacactttccgtcagcaacagag
actgtcctcaatgaacattggttccaggtaggaatcaccatggaagtcaaagtatcttgc
attgaaagtccggcaaaattctggtgccagatggcacaggagagtacaagtcttcagatc
cttatgcaagaaatgcagtatcattatacctccagtcctccacagcaaattgatggagac
atttgtgttgctctggatcatgacaatggtatgtggtacagagcacggattgttgagaat
gatcggtctccccatgtagatgtgcggttcatagattacggacaaaccaggcgtgtctct
ctgcaggatttgcgccccctggacccagtgtttcgaagactgaagacccaggcctttcag
tgtttcctgcagaatctgaacactcctacaagtcctgttccagcagagtggagtgatgct
gcctcatcggagttccagaagtttgtagattccactgctgactctaatgtaggattgaaa
tgcaccgtacatgcagtcatgcgtgacacccaaggcttggtgattaatatggtagatatt
gaaacaccagttcaaagtgcatgcaaacttctggttcagaaaggagtaaaggccccagct
cctctaaaatctcctccactttcttctgccccgcccgacacgaaaaacttctcattacac
aacatcgaagttggagggaaagagaaggtgtggataactagtgcaaaaagtgttgctcac
ttctatggccagcttgaaagaaattctcatgtgaatgacaaattgacaaaagatcttcag
catttttgccaccaaccactgcagagcacaaactgtcctcaatcactagaaacggtttgt
tttgctaaatacactgataaccagtggtacagaggacagattaaagcaacacatccaacc
cttgaggttcactttgtggattatggggacacagtcacattgagtcaatcagacatcctt
ccctgtcctgtagaagccgtctcgctcatgtcagttcctgtgcaagctgttccatttgga
cttttcggtattccagaagatgtatcccaagaggtcaaccgctggtttgaaaagcatgcc
acagacctgcgctttactatcacagcggtggctaaagactctggtggaaagcttttagtt
gaactgtatgacggaacaacacatataaatgagatggttagagagaagctaaaagaggtg
agaccgggaaaagaaataattttagtccaatcgccttctctgagctctaaactatcaact
acttcaagatgcgcagatcaatttcagaccaaattgaatttgccagaatatgtgcaaatg
ccaacatctcaggattgggctgcgaggggaacagtaattaagcacagtagcactgcaatg
tgtttcacatccccgcaaagaagagttggacagtctactcctcagcagtcactgttggac
caacctgaaaagaagcccatggttgaacatgatggacagatgtgtcgtttctccaaactc
acagaccttccctcaagacacttgaaaccagggttggtaacagaggtgtatgtttcacac
tgtaacagccactctagtttctttattcagttgacaaaggatgaagatgatatattctct
cttgtggagaaactaaatggctcacagtcatcttgtgatgccactccagttgacttgaac
gaactgcagctcggtgacttggtgaatgcggagtatcctgaagacagctcatggtatcgt
gcagtcgttaggcgcaaacctgggaatggaaccgttcatgttgaattcatagactttgga
aatgaagcaattattccatccctgaaagtgaaacaactcgacaagcagttcatagaatat
cccaggttcagtattcactgtgtacttggtagaataactaatgctaacaacaaagagaca
tgggaggaagatgtcacatcgatgatcaaaaaggctacaacaacagaaaacgctgagaag
aaactggcatgcgcattcatgaaggagaccggatcagtttgggaggtcagtctagaagat
caaggtattgtgttggcacattcgttagttgaagctagtcaaacaggcagagcagatgta
tcacaactgtcttgttcaggtgaaaacacgattcccctgctgtacaagaagccaagcgtt
tcccaaaaccaggctttagatgtctatgcgtcctctatagttgaacctaactacttctgg
tgtcaacatgcaaactctgaggagctttacaggatctcaagaattgttcaagagtttgta
aactctgccctgcaggaccctgtcctaatggataccctgaaccccagaagtccttgtctg
gctttctttgctgaagacaaccaatggtatcgagctcagatcgttcacaaaacgaatgat
cttttcactgttctttttgtggactatggaaatgagtccgaagttgatctcaaggcgata
aggtcaattccacctccgctactagagagcgcccctcaggccttcctgtgttctctggct
ggagttgagcacccagaaggcgcctgggataacaacactgttgatgagttttaccagctt
atcgttgacaaaccactgaaagttacagttcagaaaatgtataatgatctggaaagtctc
cccacacaataccaggtcaaagtggagtgtgaggaacatgttatcaacgacttgatgaga
agttacttgcattgctctgatttgcacgtccacagcaaaacagagtgtgctgacgagctc
ttctcctctgacatgaccatttcaaatgaaaccttgaaccggtctgagtataaacgtctt
acacaagaaataactcccaaattgaattccactgaggctccagtgatggatagatcacca
agcaccacgcaatgttcaggagacactctggcagtcaggacaatctcttataatggtctt
gcaggagtctcctcaagtggatccaatgttccttccgagagtgtccccaaacttgaaact
cttccaaaacgatcaataaaaccaggttgggtatcagatgtctatgtttcacaatgcaac
agtccatcaagtttctttgttcaattagtagaggatgaaaagtgtctgttctctcttgtg
gaaagtctcaattctgaccaatcagatggtgttgcactcaagaacgttgtcaatctgcag
ccaggggatctggtgaattctgagtttccagatgactgttcctggtatcgtgcagtcatt
ctagaaacaaatggagaagacaaaattcatgtgcaatacatagactttggtaatgaagca
ttcatttcacccctcaaggtttgcaggctggacacccagttcctggagcacccaagattt
agtatccattgttctttaagtggacttgcggacactaaatacaaaggattggagcaggaa
atttgttgccaattcaaaaaagttgcaggtgcggacagtgcaaggaaatgggaatgtaag
ttcatcaaagacactggatccacatgggaggtctgtctggaccagaacatcatactaaca
gattcactaaatatgtgttgttcagctggagactctactcaccttgaccgacaaagccca
agttctggatctttgccatcccagatagagaggattgacagagagcataatacacagctg
caattctggaaactggatatagtcctgggacagactttggatgtgtacgcctcctccata
gcgggccctggttatttctggtgccagtatgcaaactctgaggagcttgctgaaatctct
aaagtttgtcagctcattggaaactctgagcataaggacacagtcctcatgtctaccctg
agccctggaagtctttgtctggctctctttgccgaagacaagcaatggtatcgagctcag
attgttagcaaaatggatgttatctctgttgtctttgtggattatggaaatgagtcagaa
actgatttgaagtctttgaagtctgttccacctcagctactagaacaccctcctcaggcc
tttctgtgttccctggctgaatttgagaactcagaaggcagctgggatgacaacgccctt
gatgggtttcatgagctccttgctgataagccgctgaaagtgacagttcagagcatggat
aataatatcaagctccctattcctcaataccaagtgaaagtagagtgtgaggagctgatt
gtgaatgacttcatgaagacttgctggagaggctcccccaccgagtctcaatcagaggaa
gcggctaatcattgtaactgtcaacgggaagaaactgatgattga
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integrated database retrieval system
