Oncorhynchus tshawytscha (Chinook salmon): 112256928
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Entry
112256928 CDS
T05605
Symbol
slc5a6b
Name
(RefSeq) solute carrier family 5 member 6 isoform X1
KO
K14386
solute carrier family 5 (sodium-dependent multivitamin transporter), member 6
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
112256928 (slc5a6b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
otw02000
]
112256928 (slc5a6b)
Transporters [BR:
otw02000
]
Solute carrier family (SLC)
SLC5: Sodium glucose cotransporter
112256928 (slc5a6b)
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Gene cluster
GFIT
Motif
Pfam:
SSF
DUF5319
Motif
Other DBs
NCBI-GeneID:
112256928
NCBI-ProteinID:
XP_024286284
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All DBs
Position
LG08:11820853..11835367
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AA seq
647 aa
AA seq
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MSPSIPFSNSSRILIPGTKMDALAQMHFATIDYVIFALLLASSMGIGLYYALSGGRQRTT
QEFLLADRSMSCLPVSLSLIATFQSAVAIVGVPAEIYTHGTQYWFIGCAYILGLFIPAHI
FIPVFYKLHLTSAYQYLELRFNKPVRICGTVTFIFQTVIYMAVCVYTPALALNAVTGFDL
WGAVLATGLVCTLYTTLGGLKAVIWTDVFQTIVMFAGQLAVIVVGVQQTGGVAEVWRKVS
EGNRISGIDLNPDPTVEYTFWTLGVGGVFLMLSLYGVNQAQVQRYLSAKTERDAIMSCYM
VFPSLQLALALSCVMGLVMFARYCGEDHFHNLGVLSKNEMVLYFVMDMLQGLPGLSGLFI
SCLFSAALSTISSAFNSLATVTMEDLIKPHCPSMTEARATLLSKGLACSYGLLCLAMAYL
THLMSDSVLQTAFKIFGMVGGPLLGVFSLGLFFPWANSTGALVGLGSGLAMAFWVGIGSI
VTSTSGGLAAVSQFNCTAVQLSGNITTAMGTALISTAMPTVTHSRPMGLQRFYSLSFMWY
SALNSFTVVITGLVVSFLTGPMKAEEVTPGTLYPLLGNMLFFVPDKLKQKLCCVTPLGHG
PTIQECPPAQHERNGQAIYTEEGLLEEERQSFLLTSHTPVVEHETAL
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgagcccctccatcccattcagcaatagtagccgtatcctgattcctggcaccaagatg
gatgctttggcacaaatgcacttcgccactatcgactatgttatatttgcccttttgttg
gcgtcgtccatgggcatagggctgtactatgccctgtcagggggtcggcagcgcaccact
caggagttcctgctggcggaccggagcatgagctgcctccctgtgtctctgtcactaatc
gctacatttcaatcagcggtggcaatagtgggcgtgccagcggagatctatacccatggc
actcagtactggttcataggctgtgcttacatcctggggctattcattccagcacacatt
ttcattcctgtgttctacaagctgcatcttaccagcgcttaccagtatctggaactgcgg
ttcaacaaaccagtgcgtatatgtggaacagttaccttcatctttcagacggtcatatat
atggctgtttgtgtgtacactccagccctagcactcaatgcagttactggctttgattta
tggggagcagtgctggccactggactggtgtgtacactgtatacaactctgggaggcctg
aaggcagtgatctggacagatgtcttccagaccatagtgatgtttgctggtcaactagcg
gtcatcgtggtgggggtccagcagactgggggggtggcagaggtctggaggaaggtctca
gaggggaaccgcatctccggcatagacctgaaccctgatcctacggtggagtacacgttc
tggaccctgggggtggggggagtcttcttgatgttgtctctgtatggggtcaaccaggcc
caggtccagagatacctcagcgccaagaccgagagggacgccatcatgtcttgctacatg
gtgtttccctctctacagttagctctagctctgagctgtgtcatggggcttgtcatgttt
gcacgctactgtggggaggaccatttccacaatctaggtgtcttatcaaaaaatgagatg
gtgttgtactttgtgatggacatgctgcagggtctacctggcctgtctggactgtttatc
tcctgcctgtttagtgcagctctcagcaccatctcatcagcctttaactctctggctaca
gtgaccatggaggatctgatcaaaccacactgcccctccatgacagaggccagggccacc
ctgctctccaagggactggcatgttcatatggactgctgtgtctggccatggcctatctc
acccacttgatgagtgattccgttttgcagactgctttcaaaatatttggaatggttggt
ggtcctcttctgggtgtcttctctcttgggttgttctttccttgggcgaactctaccggt
gccctggtagggttggggtcaggcctggcgatggccttctgggtgggcatcgggagcatc
gtaaccagtacctctgggggtcttgctgctgtgtctcagttcaactgtactgctgtacaa
ctctcagggaacatcaccacagccatggggacagcactcatcagtactgcaatgcccacc
gttacacacagccgaccaatgggtctgcagaggttctactccttgtccttcatgtggtac
agtgctctcaactccttcactgtggtgatcacagggttggttgttagctttctcacagga
ccaatgaaagcggaggaggtgaccccaggcactctgtatcccctgttgggcaacatgctg
ttcttcgtaccagataaactcaaacagaagctgtgctgcgtcaccccactggggcatggg
ccaaccatccaggaatgtccacctgctcaacacgagagaaatggtcaggccatctacaca
gaggagggcttgttagaagaggagaggcaaagctttcttctaacctcccacacacctgtt
gtggaacatgagaccgctctgtga
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