Oncorhynchus tshawytscha (Chinook salmon): 112256945
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Entry
112256945 CDS
T05605
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04141
Protein processing in endoplasmic reticulum
otw04210
Apoptosis
otw04217
Necroptosis
otw04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112256945
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
112256945
04217 Necroptosis
112256945
04218 Cellular senescence
112256945
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
otw01002
]
112256945
Enzymes [BR:
otw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
112256945
Peptidases and inhibitors [BR:
otw01002
]
Cysteine peptidases
Family C2: calpain family
112256945
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
Sec_GG
Motif
Other DBs
NCBI-GeneID:
112256945
NCBI-ProteinID:
XP_042181114
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All DBs
Position
LG08:complement(8654692..8676439)
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AA seq
698 aa
AA seq
DB search
MPPPGVCMSIMQERHKKEGVGSLANPEKHSNQDFQQLTQYCLVRGVRYIDEIFPPDHNSI
GDGLLSPDDMGRVVWLRPAKMVQNPDFILDGLSRFDFGQGMVGDCWFLASIGALTFQKDI
LEQVVPLNQSFKEDYCGIFHFRFWRFGKWVDVVIDDKLPTVDGRLIFVHSKTPNEFWPAL
LEKAYAKVCGSYADMNLGTPSEAMMDFTGGVHITFKLTDAPPNLWDLLFRAVQSKSLMGC
NTPQGETSANTVAPNGLVRGHAYTVTGVKQIMSQGRPVNLIRLFNPWGRGEWKGGWSDKS
SMWQTVSPDDRKMCLSVKEDGEFWMTMEDFCRHFTDVTICCMCPDFLDGNSKGLWTHSLH
DGRWVAGTTAGGCMNFPDSFWINPQYRVKIEGLDRDCSETQGDNNMLVSLMQKPDKRNRR
LVKSLHIGINIFEVPAQFKGQRGKFPAVFFNNNVPVAQSKNYLNARTVVVFSRLKPGEYL
IVPSAFNPNETASFILSILSKVETHIHENSNYQDIVEITKPMPTHNRADMDNKQTLFRQY
SDQFEEVDAEQLQRILHETLLQGNAKKTQGFSLESCRSMVALMDTSITGKLNSSEFLHLW
RKVTVYKDIFLRSDVNRSGMLSLSQLRNAIMASGVRLSDSLLNLIALRYGGSSGNISLES
FISLVLRVDRMAKIFRQLNEGGAISLRDNEWMYITMYA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcccggtgtgtgtatgagtataatgcaggagcgccacaagaaagagggtgtt
gggagtcttgccaacccagagaaacacagcaaccaagactttcagcagctgacgcaatac
tgtttggtcaggggagtgaggtacatcgatgagatattccccccagaccataactccatt
ggtgatgggctactttcccctgatgacatgggcagagtggtgtggttgagaccagcgaaa
atggtacagaatccagattttatccttgatggactttcaaggtttgactttgggcaagga
atggttggagattgctggtttcttgcttccattggggctttgacgttccagaaggacatc
ctggaacaagtagtacccctaaaccaaagctttaaagaggattactgcggaatattccac
ttcaggttctggaggtttgggaagtgggtggacgttgtgatcgatgacaagctaccaaca
gttgacggcaggctcattttcgttcattcaaaaactcccaatgagttttggcccgccttg
ctggagaaagcctatgccaaggtgtgtggctcctacgcagacatgaatttagggacccct
tcagaggctatgatggacttcactggaggggttcacatcacattcaagctcactgacgct
ccaccaaatctgtgggacctcctgttcagagctgtccaatccaaatctctgatggggtgt
aacacacctcaaggggaaacatcagcaaacacggtggcacccaacggattagtgaggggt
catgcttacaccgtcactggggttaaacagatcatgagccaaggcagaccagtgaatctg
atccgcctcttcaacccctggggccggggagagtggaagggaggctggagcgataagtct
tccatgtggcaaacagtgagtcctgacgatcggaagatgtgtctgtcagtgaaagaggat
ggggaattctggatgacaatggaagacttctgtaggcacttcacagatgtgactatctgc
tgtatgtgccctgattttctcgacggcaactctaaaggtctttggacacactccttacat
gatggcagatgggttgctggaaccactgctggaggttgcatgaatttcccagacagtttc
tggataaatccccagtatcgggtgaagatcgagggattagacagggactgctctgagaca
cagggcgacaacaacatgttggtgtctctgatgcagaagcctgacaagagaaacagacgc
ctggtcaaaagtctccacatcggcatcaacatcttcgaggtgcctgcccaattcaaagga
cagagggggaagtttcctgcagtcttcttcaacaacaatgtgcctgtcgcccaatcgaag
aactacctgaatgctcgaacagtggtggtgttctccaggctgaaacctggtgaatacctg
atcgtgccatcagccttcaacccaaacgaaaccgcctccttcatcttgtccatcctctcc
aaggtggagacccacatccatgaaaactcaaattaccaagatattgtggaaatcaccaag
cccatgcctactcacaatagagcagatatggacaacaaacaaactctgtttcggcaatat
tctgatcagtttgaggaggtggatgctgaacagcttcagaggattctacatgaaactctc
ctccaaggaaatgcaaagaaaacacaaggcttcagcttggagtcctgtcgcagcatggtg
gccttaatggatacatcaatcactggaaaactgaacagttctgaatttctacatctatgg
agaaaagttaccgtgtacaaggatatcttcttacgttcagatgtgaaccgttccggaatg
ttgtcattgagtcaactgaggaacgcaatcatggcttcaggggtcaggctgagtgacagt
ctgttgaacctcattgctctgcgctacggtggatcttctggaaacatcagcctggagagt
ttcatcagcctcgttctacgcgtggaccgcatggccaaaatattcagacaactcaacgag
ggaggggccatatctcttcgagacaacgagtggatgtacattactatgtatgcataa
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