Oncorhynchus tshawytscha (Chinook salmon): 112256983
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Entry
112256983 CDS
T05605
Symbol
vti1b
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
112256983 (vti1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112256983 (vti1b)
Membrane trafficking [BR:
otw04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
112256983 (vti1b)
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Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
Fusion_gly
DUF2264_C
Motif
Other DBs
NCBI-GeneID:
112256983
NCBI-ProteinID:
XP_024286346
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Position
LG08:complement(5580041..5598098)
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AA seq
226 aa
AA seq
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MSSEEFEKLQEIFKSLYDELKLMPDRLLKCQGEEKKRLVRTFDERHGEAVEVLQGMEQEL
IGVPSSYRNAMSTRLRLFRRDLGKLQREVKSTDLSSTSSTRPAEGAYGIYSSQNEHSTQL
QSQRALLIQGHEHLNNASQSIERSQRIAAETDQIGVDIIEELGEQREQLDRTRDRLVNTG
ENLSRSRKILRAMSRRLMTNKLLLSVIILMELVILGAVVYLKFFRK
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcggaagagtttgaaaagctgcaggagatcttcaaatccctttatgacgaactg
aagttgatgcctgacagattactgaaatgtcaaggagaggagaagaagaggttggtgcga
acttttgacgaaagacacggagaggcagtggaagtgctgcaggggatggagcaggagttg
atcggtgttccctcgtcctaccggaacgccatgtccaccaggctgcgtctgttccgcaga
gacctggggaagctccagagagaggtgaagagcactgacctgtcctccacctcctctacc
cggccagcagagggcgcctacggcatctactcctctcagaacgaacacagcacccagctt
cagtctcagagggccttgctgatccagggacacgagcacctgaacaatgccagtcagagt
atagagaggagtcagcgcattgccgcagagacagaccagatcggcgtggacatcatcgag
gagctgggagagcagagagaacagctggaccgcaccagagacagattggtcaacactggg
gagaacctcagccggagcaggaagatcctacgagccatgtctcgacgactgatgaccaac
aagctgttgttatccgtcattattctgatggagctggtcatactgggtgcagtcgtctac
ctcaagttcttccgcaagtag
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integrated database retrieval system