KEGG   Oncorhynchus tshawytscha (Chinook salmon): 112256983
Entry
112256983         CDS       T05605                                 
Symbol
vti1b
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B
  KO
K08493  vesicle transport through interaction with t-SNAREs 1
Organism
otw  Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:otw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    112256983 (vti1b)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:otw04131]
    112256983 (vti1b)
Membrane trafficking [BR:otw04131]
 SNARE
  SNAP-25[N] (Qb)
   Vti1
    112256983 (vti1b)
SSDB
Motif
Pfam: V-SNARE_C V-SNARE Sec20 Fusion_gly DUF2264_C
Other DBs
NCBI-GeneID: 112256983
NCBI-ProteinID: XP_024286346
LinkDB
Position
LG08:complement(5580041..5598098)
AA seq 226 aa
MSSEEFEKLQEIFKSLYDELKLMPDRLLKCQGEEKKRLVRTFDERHGEAVEVLQGMEQEL
IGVPSSYRNAMSTRLRLFRRDLGKLQREVKSTDLSSTSSTRPAEGAYGIYSSQNEHSTQL
QSQRALLIQGHEHLNNASQSIERSQRIAAETDQIGVDIIEELGEQREQLDRTRDRLVNTG
ENLSRSRKILRAMSRRLMTNKLLLSVIILMELVILGAVVYLKFFRK
NT seq 681 nt   +upstreamnt  +downstreamnt
atgtcatcggaagagtttgaaaagctgcaggagatcttcaaatccctttatgacgaactg
aagttgatgcctgacagattactgaaatgtcaaggagaggagaagaagaggttggtgcga
acttttgacgaaagacacggagaggcagtggaagtgctgcaggggatggagcaggagttg
atcggtgttccctcgtcctaccggaacgccatgtccaccaggctgcgtctgttccgcaga
gacctggggaagctccagagagaggtgaagagcactgacctgtcctccacctcctctacc
cggccagcagagggcgcctacggcatctactcctctcagaacgaacacagcacccagctt
cagtctcagagggccttgctgatccagggacacgagcacctgaacaatgccagtcagagt
atagagaggagtcagcgcattgccgcagagacagaccagatcggcgtggacatcatcgag
gagctgggagagcagagagaacagctggaccgcaccagagacagattggtcaacactggg
gagaacctcagccggagcaggaagatcctacgagccatgtctcgacgactgatgaccaac
aagctgttgttatccgtcattattctgatggagctggtcatactgggtgcagtcgtctac
ctcaagttcttccgcaagtag

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