Oncorhynchus tshawytscha (Chinook salmon): 112257014
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Entry
112257014 CDS
T05605
Symbol
cyfip2
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04810
Regulation of actin cytoskeleton
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
112257014 (cyfip2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112257014 (cyfip2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
otw03019
]
112257014 (cyfip2)
Messenger RNA biogenesis [BR:
otw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
112257014 (cyfip2)
Factors involved in mRNA localization
Other mRNA localization factors
112257014 (cyfip2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
112257014
NCBI-ProteinID:
XP_042181897
LinkDB
All DBs
Position
LG08:75018286..75083639
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AA seq
1252 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCGEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLQQQLEVIPGYEELLAD
IVNISVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLGKIDKFFK
LQVVPLFGDMQIELSRYIETSAHYEENKSKWTCTQSSISPQYNLCEQMVQIRDDHIRFIS
ELARYSNSEVVTGSGLDSHKSDEEYRELFDLALRGLQLLSKWSTHVMEVYSWKLVHPTDK
FCNKDCPGTAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNQAIRNTIYA
ALQDFAQMTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGAREPPNDPCLRGEKDPKGG
FDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKHSFFF
THLLNFSEALQHCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMME
YVLYPLDLYNDSGYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMSGSVL
LDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLVTQRISAAMYKSLDQ
AISRFESEDLTSIVELEWLMDINRLTHRLLSKHMTLDSFDAMFREANHNVSAPYGRITLH
VFWELNFDFLPNYCYNGSTNRFVRTAIPFTQEPQRDKPANVQPYYLYGSKPLNIAYSHIY
SSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICRL
PRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCDL
LHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTPQQIAIAREGDLLT
KERLCCGLSMFEVILTRIRSFLQDAVWRGPPPTNGVMHVDECMEFHRLWSAMQFVYCIPV
GTHEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDSKDEIIKNVPLK
KMADRIRKYQILNNEIFAILNKYMKAVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgacgacccacgtgactctggaggatgctctgtctaacgtggatctgttggaggagctg
cccctccctgaccagcagccctgcatcgaacctccgccttcatctatcatgtaccaggcc
aacttcgataccaactttgaggacaggaatgcgtttgtaacggggatagctcgctacatc
gagcaggctactgtccactctagcatgaatgagatgcttgaggagggccatgagtatgct
gtcatgctctacacctggagaagctgctcaagagctataccacaggtgaagtgtaatgag
cagcccaacagggtggagatctatgagaagactgtggaggtgctggaaccagaggtcacc
aagctcatgaagttcatgtacttccagcgtaaggccatcgagcgtttctgcggggaggtg
aagcgtctctgccacgctgagcggaggaaggacttcgtctctgaagcctacctcctcacc
ctgggcaagttcatcaacatgttcgctgtgctcgacgaactcaagaacatgaagtgcagc
gtcaagaatgaccactctgcctataaaagggcagctcagttcctgaggaagatggctgac
cctcagtccatccaggagtcacagaacctctctatgtttctagccaatcacaacaggatt
actcagtgtctgcagcagcagttggaggtgattcctggctatgaggagttgttagcagac
attgtcaacatcagtgttgattactatgagaacaaaatgtacctgacgcccagcgagaaa
cacatgctgctcaaggtgatgggttttggtctctatctgatggacggtaacgtcagtaac
atctacaaactagacgccaagaagaggatcaacctgggaaagatcgacaagttcttcaag
ctgcaggtggtgcctctgtttggagatatgcagatagaactatcacgttacatagagacc
agcgcccactacgaggagaacaagtccaagtggacgtgtacccagagctccatctctccc
cagtacaacctgtgtgagcagatggttcagattcgtgatgaccacatccggttcatctct
gagctggctcgctacagtaacagtgaggtagtgaccgggtcaggcctggacagtcacaag
tcagacgaggagtacagggaactgtttgacctggcactcagagggttacagctgctgtcc
aagtggagcacacacgtcatggaagtgtactcgtggaagctggtccacccaacagacaag
ttctgtaacaaggactgtcctggcacagcggaggagtatgagagagctacacgttacaac
tacacctcagaggagaagtttgccctggtcgaggtcatcgccatgatcaagggactgcag
gtgttgatgggtcgtatggagagcgtattcaaccaggccataaggaacaccatctatgca
gccctgcaggactttgcccagatgaccctcagagagcctctacgtcaggctgtacgcaag
aagaagaacgttctcatcagtgtcctgcaggcgatccgtaagaccatctgtgactgggag
ggggctcgggagcctcccaatgacccttgtctcaggggggagaaggaccccaagggaggg
ttcgacatcaaggtgccccgcagagctgtgggaccctcgagcacacagctgtacatggtt
cgtaccatgctggagtcgttgatagctgataagagtggttctaagaagactctacgcagc
agtctggatggacccatagtactggctatagaagacttccacaaacactccttcttcttc
acacacctgctcaacttcagcgaggcgctgcagcactgctgtgacctgtctcagctgtgg
ttcagagagttcttcctggagctgaccatggggcgcaggatccagttccccatcgagatg
tccatgccctggatcctcacagaccacatactggagaccaaggagccatccatgatggag
tatgtgttgtaccctctggacctctacaatgacagtggctactacgctctgaccaagttc
aagaaacaattcctctacgatgagatagaggctgaggtgaacctgtgcttcgatcagttt
gtctacaagctggctgaccagatatttgcctactacaaagccatgtctggaagtgtcctc
ctggacaagcgtttcagggcagagtgtaaaaactatggtgtgatcatcccctaccccccc
tccaaccgttatgagaccctgctcaaacagagacacgtacagctcctaggtcgctccatc
gatctgaaccgtctggtcacccagaggatctcagcagccatgtacaagtctctggaccag
gccatcagtcgctttgagagtgaagacctcacctccattgtggagttggagtggttgatg
gacatcaacagactgactcatcgtctgctctcgaagcacatgaccctggacagcttcgac
gccatgttccgtgaggccaaccacaatgtgtctgccccctacggccgcatcacgctccat
gtcttctgggaactcaactttgacttcctccccaactactgctacaacggctccaccaac
cgcttcgttcggactgccatcccctttacccaggagcctcagcgagacaagccggccaac
gtgcagccgtactacctgtatgggtctaagcctctgaacattgcctactcacacatctat
agctcctacaggaacttcgtaggcccgccccacttcaagaccatctgccgtctccttggt
taccagggcatcgccgtggtgatggaggagctgctcaagatagtcaagagcctgttgcag
ggcactatcctgcagtatgtgaagactctgatcgaggtgatgcctaagatctgtcgcctg
ccacgccacgagtacggatccccaggtatcctggagttcttccaccaccagctgaaggac
attatagagtacgcagagctgaagacagatgtcttccagagtctcagagaggtggggaac
gccatcctcttctgtctgctcatcgaacaagctctgtcccaggaggaggtgtgtgacctg
cttcatgcagcccccttccagaacatcctccccagggtctacatcaaagagggggagcgt
ctggaagtcaggatgaagaggctggaggctaagtatgctccactccatctggtgcccctc
atcgagaggctggggacccctcagcaaatagctatagcccgtgagggggatctgttgacc
aaggagcgtctttgctgtggcctgtccatgttcgaggtgatccttacaaggatccgtagt
ttcctgcaggacgccgtgtggcgaggcccgcctcccaccaatggcgtgatgcatgtggac
gagtgtatggagttccaccgcctctggagcgccatgcagtttgtttactgcatacccgtc
ggcactcacgagttcaccgcagagcagtgttttggtgacgggctgaactgggcaggctgt
tccatcatcgtgctgttgggtcagcagcgccgctttgacctgtttgacttctgctaccac
ctgctcaaggtgcagaggcaggacagcaaggatgagatcatcaagaacgtgccactgaag
aagatggctgaccgcatcaggaagtaccagatcctgaacaatgagatctttgccatcctc
aacaagtacatgaaggctgtggagaccgatagttccaccgtggagcatgtccgctgcttc
cagccacctatacaccagtccctggccacaacatgctga
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