Oncorhynchus tshawytscha (Chinook salmon): 112257066
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Entry
112257066 CDS
T05605
Name
(RefSeq) glutamate receptor 1-like
KO
K05197
glutamate receptor 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04080
Neuroactive ligand-receptor interaction
otw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
112257066
04082 Neuroactive ligand signaling
112257066
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
otw04040
]
112257066
Ion channels [BR:
otw04040
]
Ligand-gated channels
Glutamate (ionotropic)
112257066
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
GRP
Motif
Other DBs
NCBI-GeneID:
112257066
NCBI-ProteinID:
XP_042181894
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All DBs
Position
LG08:74693920..74906018
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AA seq
930 aa
AA seq
DB search
MQRSFTLLYTSFLGMCLGSSFPSNINIGGLFPTESHEYDVFRFALSHHQDIPKLVPQVDM
VKIGNSFSMTYAFCSQFSKGVYAIIGLYDRKTVNMLMSFCGALHVCFVTPSFPIETANQF
VIQLRPELQDTLVGVIDHYGWTKFVYMYSSDSGLSVLQKVLDTAAERSWLVTSVNVETMT
EASFLKVFQDLDKRKEGQIIIDCETERLTSILKKIVEQGKNAKSYHYILANLGFLDIDLT
DLRKGGANITGFQLVNYTEQNVSRTIQQWMEFENKDAKIPKRRLKYTGALTYDGVKVMST
AFQNLRKQRIDISRRGNAGECLANPPAPWGQGIDIQRALQQVRIDGLTGHIQFNEKGRRT
NFTVSVMELAPSGPKKVGYWNEDEKYVSTATFMRGSNDSSYGLQNRTYIVTTILESPYVM
LKKNHDQLSGNDKYEGYIVELAAEIAKHVGYHYKLKVVSDGKYGARDPETKMWNGMVGEL
VYGKADVAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPTKSKPGVFSFLDPLAYEIWM
CIVFAYIGVSVVLFLVSRFSPYEWHAEDYEEEADPQTPTQPTGPGAGLQSGQSPGQPGQN
QQNQEQTNEFGIFNSLWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLA
AFLTVERMVSPIESAEDLAKQTEIAYGTLDAGSTKEFFRRSKIAVFEKMWSYMKSADPSV
FVKTTDEGVMRVRKSKGRYAYLLESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSP
LRNPVNLAVLKLNEQGLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILIG
GLGLAMLVALVEFCYKSRTESQRMKQNVNDAMHCSSMTRMSGNGGGGGGGGGGAGGGENG
RILTHDFPETVQTLSCMSHTASMGLSASGL
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgaagcttcaccctcctgtacaccagttttctggggatgtgcttgggttcaagt
tttccaagtaacatcaatatagggggactattcccaaccgaatctcacgaatatgacgtg
tttcggttcgcgctctcgcaccaccaggatatccccaaactggtgccgcaggtggatatg
gtcaagataggcaacagcttctccatgacatatgccttctgttcccagttctctaaaggt
gtctatgctatcattggcctctacgacaggaagacggtcaacatgctgatgtcgttctgc
ggggcgctgcacgtgtgtttcgtcacgccttccttccccatcgagacggccaaccagttt
gtgatccagctgagacccgagctacaggacactctggtgggggtcatagaccactacgga
tggaccaagttcgtctacatgtacagttctgactctggcctgtctgtgctgcagaaggtc
ctggacacggctgctgagaggagctggctggtgacgtctgtcaacgtagagaccatgacg
gaggcctcattcctcaaggtgtttcaagacctggacaagaggaaggagggacagatcatc
attgactgtgagactgagagactcacctccatcctcaaaaagatcgttgaacaggggaag
aatgctaagagttaccactacatcctggccaacctgggttttctggacattgacctaaca
gacctgaggaaaggtggggcgaacatcacaggcttccagctggtcaactacacagagcag
aacgtcagtcgtaccattcagcagtggatggagttcgaaaacaaagacgccaagatcccc
aagagacgcctgaagtacaccggagcattgacatatgacggggtgaaggtgatgtctaca
gcattccagaacctccggaaacagaggatagacatctctcgccgtggcaacgcaggcgaa
tgcctcgccaacccgcccgcaccctggggccaaggcatagatatacagagagccctgcaa
caggtgcgtatcgatggcctgacaggtcatatccagttcaatgagaaaggacgcaggacc
aacttcaccgtcagtgtcatggagctagccccctctggacctaagaaggtgggctactgg
aacgaggacgagaagtacgtcagcacagccaccttcatgagaggaagcaacgacagcagc
tacggcctacagaacaggacctacatagttaccaccatcctggaatccccatacgtgatg
ctgaagaagaaccatgatcagctgtcagggaacgataagtacgagggctacatcgtggag
ctagcggctgagatcgccaagcacgttggataccactacaaactgaaggtggtctcagat
gggaagtatggagccagagaccccgagaccaagatgtggaacggcatggtcggagagctg
gtgtacgggaaagcagacgtggcggtggccccactgaccatcaccctggtccgagaagaa
gtgatcgacttctccaagccattcatgtctctgggcatctccatcatgatcaagaagccc
accaagtctaaaccaggtgtcttctccttcttggacccgctggcctatgagatctggatg
tgtatcgtgttcgcctacatcggtgtgagtgtggtcctgttcctggtgagccgcttcagc
ccctacgagtggcacgcagaggactatgaggaggaggccgacccccagaccccaacccag
ccgacagggccaggtgctgggctacagtcggggcagagccctggtcagccaggccagaac
cagcagaatcaggaacagaccaacgagtttggcatcttcaactctctctggttctccctg
ggagccttcatgcagcagggatgtgacatctcacccaggtctctgtcagggcggatagtg
gggggtgtgtggtggttctttactctcatcatcatctcgtcctacacggccaacctggct
gctttcctcaccgtggagaggatggtgtcccccatagagagtgctgaggatctggctaaa
cagactgagatcgcctacggaactctggatgctggttccaccaaggagttcttcaggcgg
tctaagatcgcagtgtttgagaagatgtggtcgtacatgaagtcggccgacccctcagtg
tttgtgaagaccacagacgagggagtgatgagggtcaggaagtccaaagggaggtatgcc
tacctgttagagtccaccatgaacgagtacatcgagcagaggaaaccctgtgacaccatg
aaggtgggggggaacctggactctaaaggatacggtatcgccacgcccaagggctcaccc
ctcagaaaccctgttaacctggccgtgttaaaactgaacgagcaaggcctgttggacaaa
ctgaaaaacaaatggtggtacgacaagggagagtgtggcagcgggggcggggactccaag
gataagacaagtgcgttgagcctgagcaacgtggccggagtgttctacattctgattgga
gggctgggcctggccatgctggtggcgttggtggagttctgctacaagtcgcgaaccgag
tctcagagaatgaagcagaacgtcaacgacgccatgcactgctcctccatgaccagaatg
agcgggaacgggggagggggaggaggaggggggggaggagcaggtggaggagagaacgga
cgcatcctaactcacgacttccctgaaacagtccagactctctcctgcatgagccacacc
gccagcatggggctcagcgcctccggcctgtga
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