Oncorhynchus tshawytscha (Chinook salmon): 112257075
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Entry
112257075 CDS
T05605
Symbol
nkx1.2lb
Name
(RefSeq) NK1 transcription factor-related protein 1
KO
K09309
homeobox protein Nkx-1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
otw03000
]
112257075 (nkx1.2lb)
Transcription factors [BR:
otw03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: NKL
112257075 (nkx1.2lb)
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GFIT
Motif
Pfam:
Homeodomain
Nop14
Motif
Other DBs
NCBI-GeneID:
112257075
NCBI-ProteinID:
XP_024286420
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Position
LG08:complement(71497751..71505550)
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AA seq
387 aa
AA seq
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MNREKVQVGDVSVAAPPASGVTTQTAVIVVAAPESMDNHGEKRLSANALSVFSCPGGRDI
LQADSRNNSPRQEPAPVAMPMLHRTTSFSVLDILDPNKFTSKKPNPNRTGSEFAFGTENR
GGDDSSHDVEQKSYADDYDTCQKSTGLKEGFMCAYRSEECENDFKRGSHSDSEMQDDVCS
EEGSSALTGNAEGELGHHDDDDQASKSPRSPGGQQTQQSGSNGQSNQGKPKRKRSGSDSK
SGKPRRARTAFTYEQLVALENKFKSTRYLSVCERLNLALSLSLTETQVKIWFQNRRTKWK
KQNPGADTSAPTGGGQNGQSNGLGSLSPLSSSPPMSHLSMHTGYPGHGPGGLVCTTQLPF
LPSHAVLSPFMLGSQTYGAPAFYTSHL
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaacagggaaaaggttcaggtgggagacgtctcagttgctgctccgccggcgtccggt
gtgactacccaaacagctgtgatcgtcgtggccgctccggaaagcatggacaatcacggc
gagaagcggctctctgccaacgcactgtcggtgttttcctgccccgggggtagagacata
ctgcaagcggacagtcgaaacaactctccacgtcaagagccggctccggtagcaatgcca
atgcttcaccggaccacttcattttcggttttggacattttggacccaaataaatttacg
agcaaaaagccaaatcctaaccggacaggcagcgaattcgccttcgggacagagaaccgt
ggaggtgatgactcgagtcatgatgtagagcagaagtcttatgcagatgactatgacaca
tgtcaaaaatctacaggactaaaggaggggttcatgtgtgcctacagatccgaagaatgc
gagaatgatttcaaaagaggctcccactctgacagcgagatgcaggatgacgtgtgtagt
gaggagggcagcagcgcactaactggaaacgcggagggggaactgggacaccatgatgac
gacgaccaggcgagcaagagcccaagaagtcctggtggacagcaaactcaacagtcaggg
tcgaatggacaaagtaatcaaggaaagccgaagagaaagcgctctggctccgattcaaag
tcgggtaagccccgaagggcccggacagcattcacttacgaacaacttgttgcactggag
aacaaattcaagtccacccgatacctctctgtgtgtgagaggctcaatttggcactgtca
ctcagtttgactgaaactcaagtcaaaatctggttccagaaccgacggaccaagtggaag
aaacaaaaccctggcgcagataccagcgccccgacgggcggtggccagaacggccagagc
aatggactaggaagcctgagtccactcagctcgtctcctcccatgagccatctgtcaatg
cacacgggctacccaggtcacggaccaggcgggctagtctgcaccacccaattacccttt
ctgccaagtcatgcggtactgtcacctttcatgttaggatctcagacttacggagcgcct
gcgttttacacttctcacctgtga
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