Oncorhynchus tshawytscha (Chinook salmon): 112257124
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Entry
112257124 CDS
T05605
Symbol
colec11
Name
(RefSeq) collectin-11 isoform X1
KO
K10066
collectin sub-family member 11
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112257124 (colec11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112257124 (colec11)
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
otw04091
]
112257124 (colec11)
Membrane trafficking [BR:
otw04131
]
Endocytosis
Phagocytosis
Opsonins
112257124 (colec11)
Lectins [BR:
otw04091
]
C-Type lectins
Group 3: Collectins
112257124 (colec11)
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Gene cluster
GFIT
Motif
Pfam:
Lectin_C
Collagen
Motif
Other DBs
NCBI-GeneID:
112257124
NCBI-ProteinID:
XP_024286453
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All DBs
Position
LG08:complement(40568210..40572489)
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AA seq
277 aa
AA seq
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MSGEKLMPCVLITLLGLTLMESAHGQHMSDEPCSVQILVPGLKGEEGEKGVKGAPGRPGR
MGPPGEIGHLGVKGQKGIMGHYGKIGPSGVKGVKGDMGDAGSRGPNGDPGVPCECTPLRK
IIGEMDILVTQLSNELKFIKNALPSPAAVAGIKETDSKVYLLVKEEKRYTDAEVYCQGRG
GHLTMPKDEGANAAIAGYITEAGLSRVYIGINDIDREGHFTYVDNSPMSTFSKWREGEPN
NAYDDEDCAEMVAVGDWTDVACHSTMYFVCEFDKDSG
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgagtggagagaagctgatgccttgtgtacttatcactctactggggctgaccctgatg
gagtcagctcatggacagcacatgtcagacgaaccctgctctgtccaaattctcgtccca
ggactcaaaggagaggaaggagaaaagggagtgaaaggagcacctgggagaccgggaaga
atgggtccaccaggggagataggacatctgggagttaaagggcagaagggtataatggga
cattatgggaagattggccccagtggagtcaaaggtgtaaagggagatatgggtgatgct
ggatcaaggggcccgaatggtgatccaggtgttccatgtgaatgcacacccctgaggaaa
attattggtgagatggacatcctagtgacacagttatccaatgagctgaagttcataaaa
aatgcactgccctcccctgcagctgtcgccggcatcaaagagaccgacagcaaggtctat
ctgctggtcaaggaggagaaacgctacaccgatgcagaggtctattgtcaggggaggggt
ggacacctgaccatgcccaaggacgagggggccaatgcggccatcgctgggtacatcaca
gaggcgggcctgagccgggtgtacattggtatcaacgacatagaccgcgagggccatttc
acctacgtggataactccccaatgagcaccttcagcaagtggagggaaggggaacccaac
aatgcctacgatgatgaggactgtgctgaaatggtggcggtgggggactggaccgatgtg
gcctgccactccaccatgtactttgtctgtgagtttgacaaggacagtggctga
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