Oncorhynchus tshawytscha (Chinook salmon): 112257256
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Entry
112257256 CDS
T05605
Symbol
rufy2
Name
(RefSeq) RUN and FYVE domain-containing protein 2 isoform X1
KO
K12482
RUN and FYVE domain-containing protein 1/2
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112257256 (rufy2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112257256 (rufy2)
Membrane trafficking [BR:
otw04131
]
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
112257256 (rufy2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RUN
FYVE
Trimer_CC
GIT_CC
PPP1R21_C
YabA
bZIP_1
FYVE_CARP1-2
zf-RING_5
Crescentin
Motif
Other DBs
NCBI-GeneID:
112257256
NCBI-ProteinID:
XP_024286525
LinkDB
All DBs
Position
LG01:77649933..77665668
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AA seq
697 aa
AA seq
DB search
MATPAEQDLALAEAESNKEKSQVFGILRLQEEKSSGEKASTTTMMAGDGRWQAPIFALAR
KASETFSGSSSHVLAKVAEPTSFVNEWSVPALRDPMSMERTNLLNMAKLSIKGLIESALS
FGRTLDSDYPPLQQFFVVMEHCLKHGLKVKKSFLGYNKSLWGPLEMVEKLCPEAGEIAAS
VRDLPGLKTPLGRARAWLRLALMQKRLADYLRLLITRKDLLSDFYDNSAVMVEEEGAVIV
GLLVGLNVIDANLCVKGEDLDTQVGVIDFSMYLKNDIDDYRSGERNGQVAAILDQKNYVE
ELNRQLNSSVHGLQGRVDNLEKSNSKLIEELAIAKNNIIKLQEENHQLRNENTIILIKAQ
QQLEVTQVDVDVELDTYKQSRQGLDEMYNEARRQLREECQLRQDVENELVVQVSMKQEMD
LAMKLLEKDIHEKQDTLIGLRHQLDEVKAINVEMYTKMQTSDDGMKQKNDMITRLEEKTN
QITATMKQLEQRLQEAERDRWTAEDGARKFKHDFANKADSLQKQIAQREKQMLQLETDLK
IEKEWRQTLQNDLERERDIVAQLSAEAQQINGLKKEFHRLQDENSQLKGICEEQEQALEE
LGCKLSESKLKIEDIKEANKALQGGQVWLKDKDATHCKLCEKEFSISRRKHHCRNCGEIF
CNACSDNELPLPASPKPVRVCDTCHALLLQRCSSNAT
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacctgcagagcaagaccttgcattagctgaagcagaaagcaacaaggagaag
tctcaagtatttggaatccttaggttacaggaagaaaaatcgtccggtgaaaaagctagc
accacgaccatgatggcaggggatgggagatggcaggcgcccatatttgccctagccagg
aaagcatcggagaccttttcaggaagcagcagtcatgttctagcaaaggtagcggaaccc
acatcttttgtaaacgaatggagtgtcccagctctgcgggaccctatgtcgatggagaga
actaacctgctgaacatggccaagctcagcatcaaaggactgatcgagtcggccctcagt
tttggacgcaccctggactccgactaccctccactccagcagttctttgttgtcatggag
cactgcctcaaacatggcctcaaagtgaagaagtcctttcttggatacaacaagtcactg
tggggtcctctggagatggtggagaagttgtgtcctgaggcaggagagattgcagccagc
gtcagggacctaccaggactaaagactccactgggcagagctcgggcctggctgcgtctg
gccctgatgcagaagaggctggctgattacctccgccttctgatcaccagaaaggacctg
ctgagtgatttctatgacaactctgctgtgatggtagaggaggagggtgctgtcattgtt
ggcctgctggtgggactcaatgtgatcgatgccaacctgtgtgtcaagggcgaggacctg
gatacacaggttggggtcattgacttctcaatgtacttgaaaaatgacattgatgactac
agaagtggagaaaggaatggtcaagtagcagccatcctagaccagaagaactacgttgaa
gaattaaataggcagcttaattcttcagtacacggcttacaagggagggtcgataacttg
gagaaatcaaactctaaactcattgaggagctggcgattgcaaaaaataacataatcaaa
ctgcaagaggagaaccatcagcttagaaatgagaacactattattctcataaaagctcag
cagcaacttgaggtgacccaggttgacgtggatgtggagctggacacctataagcagtcg
aggcagggccttgacgagatgtacaatgaggccaggagacagctcagggaggagtgtcaa
ctacgccaggatgtggaaaatgagttggtggtacaggtgagcatgaagcaggagatggat
ctggccatgaaactgttggaaaaggacattcacgaaaaacaggacacactgatcggcctg
cgccaccagctggatgaagtcaaggccatcaatgtggaaatgtacacaaaaatgcagact
tctgatgatggcatgaaacagaagaacgacatgatcactcgtttggaggagaagaccaat
caaatcacagcaaccatgaaacagctggagcaaagattacaagaggcagagcgggaccgt
tggactgcagaagatggagctcgcaaattcaagcatgactttgccaacaaagccgacagc
ctccaaaagcagatagcccagagagagaaacaaatgctgcagctggagacagacctaaag
attgagaaggagtggcggcaaaccttacagaacgacctggagagggaacgagacatcgtc
gcccagctcagtgctgaagcccagcaaataaatggacttaaaaaggagttccacaggctg
caggatgagaacagccagctgaaggggatttgtgaagaacaggagcaggccctggaggag
ttaggctgcaaactcagcgaatcaaaacttaaaatcgaagacataaaagaggcaaataaa
gctcttcagggagggcaggtctggttgaaggacaaagatgctacccactgtaaactttgt
gagaaggagttctccatctctaggagaaagcaccactgtagaaactgtggggagatcttc
tgcaatgcctgctctgacaacgagctgcccctccctgcctcaccaaaaccagtgagggtc
tgtgatacgtgccacgcccttctcctccaacgctgctcctccaatgccacgtga
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