Oncorhynchus tshawytscha (Chinook salmon): 112257264
Help
Entry
112257264 CDS
T05605
Name
(RefSeq) BRCA1-associated protein-like
KO
K10632
BRCA1-associated protein [EC:
2.3.2.27
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
otw04121
]
112257264
Enzymes [BR:
otw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
112257264
Ubiquitin system [BR:
otw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
112257264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRAP2
zf-UBP
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-RING_11
zf-RING_UBOX
CENPH
RRM_1
zf-ANAPC11
Crescentin
V_ATPase_I
FUSC
Tropomyosin
Shugoshin_N
UPF0242
CENP-F_leu_zip
DUF1664
Motif
Other DBs
NCBI-GeneID:
112257264
NCBI-ProteinID:
XP_042182281
LinkDB
All DBs
Position
LG09:17782740..17795368
Genome browser
AA seq
560 aa
AA seq
DB search
MRIGPRTLERAAVLHHHIGSRTMGDMVIETFPPNPGEQTGAEGEEGGGAQPLEDQPDGRG
PTEGPTDVSAEGTEVAPDSPSKQLPDQISFFSGNPSVEIVHGIMHLYKTNKMTSLTEDMR
RSAMLCILTVPSTMTRHDLMKFVAPFYDVMEHMKIIRDSTPNQYMVLIKFSSQADADSFY
TACNGCTFNSIEDAVCQLVYVERAEVIKSEQGASLPVIELAELPKCTVCLERMDESVNGV
LTTLCNHSFHSLCLQRWEDASCPVCRYCQTPEPVEDNKCFECGVQENLWICGHIGCGRYV
SRHAYKHFEETQHTYAIQLTHHRVWDYAGNNYFHRLVASKTDGKMVQYGCEGETCQEEKI
NALQLEYSHLLTSQLESQLIYWENKIDHLEKDTAEEISNLKAKFKETIDRCDNLERRLGE
LAKDKQSMDKKCGQLSTRVTKLVQDLKEEQEMNRCLRASQVQLQAQLAEDEHKARETGER
KDRVIAELQEQLRDVMFYLETQQQIGLPPETRTEIQEGHINIGAAATPAPGPSTAIGRGR
RGRSKKGRERLDPNSGGERD
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgcgaataggtccgcgcacgttggagagagcagccgtcttacatcatcacatcggcagc
agaaccatgggagacatggtcatcgagaccttcccacccaatcctggtgagcagactggg
gcagagggagaggagggtggaggagcccaacccctagaggatcaaccagacgggaggggt
cctactgagggccctacagatgtcagtgccgagggcacagaggtggctccagactcgccc
tccaagcagcttccagaccagatctccttcttcagtggaaacccctcagtggagattgtc
cacggcatcatgcacctctacaagaccaacaagatgacatcactgacggaggacatgcgt
cgcagtgccatgctgtgtatcctgaccgtaccctccaccatgacaagacacgacctcatg
aagtttgtggcaccattttatgatgtcatggagcacatgaagatcatacgagactccacc
cctaaccagtacatggtgctgatcaagtttagtagccaggctgatgcagatagtttctac
acagcgtgtaatggctgtacgttcaactccatagaggatgcagtctgccagctggtctat
gtggagagagctgaggtcatcaagtctgagcagggcgccagtcttccagtgattgagctg
gcagagcttcctaagtgtaccgtgtgtctggagaggatggatgagtcagtgaatggggta
ctcactacactctgtaaccacagcttccacagcctgtgtctgcaacgctgggaggatgcc
tcgtgtcctgtgtgtcggtattgtcagaccccagagcctgtagaggataacaagtgcttt
gaatgtggagttcaggagaacctttggatctgtggtcatatcggctgcggtcgctatgtc
agtcgtcatgcctacaaacactttgaggagacgcaacacacgtacgccatacagctcact
caccaccgtgtctgggactatgctggaaataactattttcacaggctggtggccagtaag
actgatgggaagatggttcagtatgggtgtgaaggagaaacctgtcaagaggagaagata
aatgctctgcaactagagtactctcacctgctaacgagtcagctggagtcccagctcatt
tactgggagaataagattgatcacctggagaaggacacagcagaggagatcagcaacctg
aaggccaagtttaaggagaccatagatcgatgtgataacctggagcgtcggctgggagag
ctggccaaggacaaacagagcatggacaagaagtgtggtcagttgtcgacccgtgtgacg
aaacttgttcaggacctgaaagaggaacaggaaatgaatcgctgtctgagagccagtcag
gttcagctacaggcccagttggctgaagatgagcacaaggctagagagactggcgagcgt
aaggacagggtgatagcagagctccaggagcagctgagagatgtcatgttttacctggag
actcagcagcagataggtctgcctccagagaccaggactgagatacaggaaggacacatc
aacataggcgcagcagccactcccgccccaggaccctccaccgccataggccgaggccgc
agggggcggtccaaaaaggggagggagagactagatcctaattctgggggagagagagac
tag
DBGET
integrated database retrieval system
