Oncorhynchus tshawytscha (Chinook salmon): 112257300
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Entry
112257300 CDS
T05605
Name
(RefSeq) sorting nexin-18
KO
K17923
sorting nexin-9/18/33
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112257300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112257300
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
otw04990
]
112257300
Membrane trafficking [BR:
otw04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
112257300
Macropinocytosis
Sorting nexins
112257300
Domain-containing proteins not elsewhere classified [BR:
otw04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
112257300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3_WASP_bdg
PX
SH3_9
SH3_2
SH3_1
Vps5
XFP
SH3_10
Motif
Other DBs
NCBI-GeneID:
112257300
NCBI-ProteinID:
XP_024286558
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All DBs
Position
LG09:complement(13863715..13868913)
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AA seq
571 aa
AA seq
DB search
MAFRAKALYDFSSENLGEISITENEVVTLYSEQDIEGWLEGTNSRGDTGLFPASYVEILR
NESSDISSNNNGISADQGQPDSPSSGYDSSYYSQSHSRAENIKDPTHSAYPVQIPQRHGY
QTSQGSDDDWDDDWDDSSTVGAEPGTKHDNDGTSSTAYTVTTSLPGRRDSSQAKSSATIG
KNLNRFSTFVKSGGEAFVLGEAAAFVKDGDKICVVMGQYGPEWQEDPYPFACSIDDPTKQ
TKFKGMKSYMSYRLTPSHTQSQVNRRYKHFDWLYARLVERFPVISVPHLPEKQATGRFEQ
DFVSKRRKGLIWWMNHMTSHPVLARCDVFQHFLTCPSTDEKTWKMGKRKAEKDELTGANF
FLTISTPAVPLDLQEVENKVDGFKAFTRKMDDNCLVVNATINEFARKQITGFKKEYQKVG
QSFKLLGQAFEMDQQSYSVGLNRAIAFTGEAYEAIGDYFAEQPRQDLDPISDLLDLYKGH
LANYPDIIHVQKGALTKVKECQKQEGEGSTINERCNIISCATLAEIQHFHRTRVRDFKTQ
MQHHLQQQIIFFQKITGKLEEALQKYDEDII
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggcgtttagggcaaaagccttgtacgactttagttcggaaaatctaggtgagatatcg
attactgagaacgaagttgttactttatacagcgaacaagacatagagggatggctagag
ggaacaaacagcagaggggatactggtctttttccagcctcatacgtggagattctcaga
aatgaatcatctgacatctcgtccaacaataatggcatatcggcggatcaaggtcaaccc
gactccccatcaagtggatatgattcatcatactattcccagtcccactctcgtgctgag
aacattaaagatccgacccactccgcttatcctgtgcaaattccccagcgccatggttac
cagaccagtcaaggtagtgatgatgactgggatgatgactgggatgacagctctactgtg
ggggctgagcccggaactaaacatgacaatgatggaactagttccacagcatacacagtg
actacttcgttgcctgggagacgtgacagttcccaagccaaaagttcagcaacaataggt
aaaaacctcaacaggttctcaacctttgtgaaatctggcggagaggcttttgtattgggc
gaggcggctgcctttgtcaaagatggggacaagatctgtgttgtcatggggcagtatgga
ccagagtggcaggaagacccatacccgtttgcctgctccatcgatgaccccaccaaacag
acaaaattcaaaggcatgaagagttacatgtcatacagactgactccatcccacacccag
agccaggtgaatagaagatacaagcactttgactggctctacgctcgacttgtggaacgc
ttccctgtcatctcagtcccccatctgcctgagaaacaggccactgggcgctttgaacag
gactttgtctccaaacgcagaaaaggtttgatatggtggatgaaccacatgacgagccac
cctgtcctggctagatgtgacgtgttccagcacttcctcacctgccccagcacagacgag
aagacgtggaagatgggcaagagaaaggcagagaaggatgagttgactggcgctaacttc
ttcctgaccatctccaccccggctgttccactggacctacaggaggtagagaacaaggtc
gatgggtttaaagccttcaccaggaagatggatgacaactgcctagtggtgaacgccacc
atcaacgagtttgcccggaagcagatcaccggatttaagaaagagtatcagaaagtgggt
cagtctttcaaactgttgggccaagcctttgagatggaccagcagtcctattctgtagga
ctgaaccgtgccatagcattcacaggagaggcctacgaggctataggagactactttgct
gagcagcccagacaggatttggaccccatatcggatctgctggacctgtacaagggacac
ctggccaactatcctgatatcatccatgttcagaaaggtgcccttaccaaagtgaaggag
tgccagaaacaagaaggggagggatcaaccatcaacgagcgttgtaacataatttcctgc
gccacactggctgagatccagcactttcaccgtacacgcgtacgtgacttcaagacccag
atgcaacaccacctccagcagcaaatcatcttcttccagaagatcactgggaagctagaa
gaggcactgcagaagtacgatgaggatatcatataa
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