Oncorhynchus tshawytscha (Chinook salmon): 112257310
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Entry
112257310 CDS
T05605
Name
(RefSeq) YTH domain-containing protein 1-like isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
otw03041
]
112257310
Spliceosome [BR:
otw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
112257310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
112257310
NCBI-ProteinID:
XP_042182322
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All DBs
Position
LG09:complement(3836484..3874291)
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AA seq
710 aa
AA seq
DB search
MAVDKRDEKDGELNVLDDILTEAPDQDDELYNPESEQHVNQKKGSKRKNNRGDNQVLKRL
RPTAHTTARQATKRSAPSAGASGEKPVNSRRGRHPSEYNTDSYYEDRKTHPIRDGGAQRG
EPPKAAHPDKPLGRRKTHLMRDCGAQRGEPLKAALPDKPLGCRRETDRHRIMPELTTEKP
SPPSEEGRVSPSKEAAEEEGASDQETGSTAESSEGHRSNMEEGEEDEEEEYEVQEVDQRA
KSAPNDYNIRSEVSDSQSESFSEGESVLSGSASEASGSETTHEKLSSSVRAVRKNQNSKL
KYVIRDARFFMIKSNNHENVSLAKAKGVWSTLPVNEKKLNAAFRSDRSVILVFSVKESGK
FQGFARLSSESHHGGSPIHWVLPAGMNAKMLGGVFKIDWICRRELPFTKTAHLSNSWNEH
KPVKIGRDGQEMEPGCGMQLCVTFPQDENINLYQVIHKMRHKRRMPSEPRSRGRPPYREP
TRGDLGSLPNSCRGRPEENAILNRKRPRIDYPAEFPQRPGFTLDPRNPPVDRRFPTGVRR
DVFLNGSYNDYMREFHHTIGQPTPWQGMAQYPGMEQQPHHPFYQHHPPPPQSHPPYAGQH
PVPHDARFREPVPHDARFREPVPHDARFREKRLVRSYSSSVHDYDMRVDDFLRRTQAVVT
SRRSRPRERDRQRERERPRDARRDRERGRDRERDRIRDREKEKERGHYRR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgacaaacgagatgagaaagacggagagctcaatgtgctggatgacatcctc
accgaggcccctgaccaggatgacgagctctataaccctgagagtgaacagcacgtcaac
cagaaaaaagggtctaagaggaagaacaaccgaggggataaccaggtgctgaagcgtctg
cgacccactgctcacaccaccgccagacaggctactaagagatcagccccttcggctggg
gccagcggggaaaagccagtcaactccaggaggggacggcacccctccgagtacaatact
gatagttactatgaggacaggaagacccatcctataagagatggtggggcgcagagaggg
gagcctcccaaagcagcccaccctgacaagccccttggccgcagaaagacccatcttatg
agagattgtggggcacagagaggggagcctctcaaagcagccctccctgacaagcccctg
ggctgcaggagagagacagacagacacaggatcatgcctgagctcaccactgagaagccg
agtcctcccagcgaggagggcagggtcagcccctctaaggaagcagcagaagaagagggg
gcgtcagaccaggagacgggcagcacggccgagtcctccgagggacaccgatccaacatg
gaggagggagaggaagatgaagaggaagagtatgaggtgcaggaagtggatcagagagcc
aagagtgctccaaatgattacaacattcgcagtgaagtcagcgactcccagtctgagtcc
ttctctgagggggagtctgttctctccggctctgcctctgaggcttcaggttctgagaca
acgcatgagaaactgtcatcgtctgtccgcgccgtccgcaagaaccagaacagcaagctg
aagtacgtcatacgagacgcccgcttcttcatgatcaagagcaacaaccatgagaacgtg
tccctggccaaggccaagggtgtgtggtccactttgcctgttaatgagaagaagctgaat
gctgccttccgttccgatcgcagtgtcatcctggtcttctcggtcaaggagagtggcaag
ttccaaggttttgccaggctgtcctcagagtctcatcatggagggtctcccatccactgg
gtcctgcctgctgggatgaacgccaagatgctgggtggggtgttcaagatcgactggatc
tgcagacgcgagttgccgttcactaaaacggctcacctctccaactcgtggaacgaacac
aagcctgtaaagatcggccgagacggacaggaaatggagccggggtgtgggatgcagctc
tgtgtgacgttcccccaggacgagaacattaacttgtatcaagttattcataaaatgcga
cacaagaggaggatgccttcggagccgcgctctcgaggacgcccgccgtacagagagccc
acccgaggcgacctgggaagtttgcctaattcatgtaggggtcggccagaggaaaatgcc
attctcaacaggaaacggccgaggattgattatccagcagagttcccacagagaccaggc
tttacactggaccctcgcaacccgccagttgaccggcggttccccactggagtgaggaga
gatgtttttctcaatgggtcctacaatgattacatgagagagttccaccacaccattggg
cagcctactccttggcaaggaatggcacagtaccctgggatggagcagcaacctcaccac
ccgttctaccagcaccatcctcctcctccccagtcacacccaccctatgctgggcaacac
cctgtaccacacgacgcccgcttcagagaacctgtaccacacgacgcccgcttcagagaa
cctgtaccacacgacgcccgcttcagagagaagagacttgtccgctcctatagctccagt
gtgcatgactatgatatgcgcgtggatgacttcctgagacggacccaggccgtggtgacc
agtcgccgcagccgtccacgggaacgagacaggcaaagggagcgagaacggcccagagat
gcccgccgggaccgagaacgtggacgcgaccgggagagagacaggatcagggacagggag
aaggagaaggagagggggcactacaggagataa
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