Oncorhynchus tshawytscha (Chinook salmon): 112257333
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Entry
112257333 CDS
T05605
Name
(RefSeq) macrophage mannose receptor 1
KO
K06560
mannose receptor, C type
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
112257333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
otw04131
]
112257333
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
otw04054
]
112257333
04090 CD molecules [BR:
otw04090
]
112257333
04091 Lectins [BR:
otw04091
]
112257333
Membrane trafficking [BR:
otw04131
]
Endocytosis
Phagocytosis
C-lectin receptors
112257333
Pattern recognition receptors [BR:
otw04054
]
Membrane-bound pattern recognition receptors
C-type lectin receptors
112257333
CD molecules [BR:
otw04090
]
Proteins
112257333
Lectins [BR:
otw04091
]
C-Type lectins
Group 6: Mannose receptor family
112257333
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_C
F5_F8_type_C
LCCL
Gal_Lectin
Chordopox_A33R
UL45
Rxt3
Motif
Other DBs
NCBI-GeneID:
112257333
NCBI-ProteinID:
XP_024286595
LinkDB
All DBs
Position
LG09:8127274..8161276
Genome browser
AA seq
2163 aa
AA seq
DB search
MLLLLFTLCSLLSCAFSQCEEGWRAYEDKCYYFSTNTKSWDDARTDCVGRGSHLMSILDI
PERTWVRTQVGTEIFWIGLNDIAAEGVWEWTDGSTFLPFLAYWKPGNPDNWEDNEDCGEV
VGGEQGRWNDDVCTSRRKYICKRPNPNPPTMCDTANGWSQYGSNCYKLKTDTRKSWLGAR
HDCVRDGADLVSIASPEEEQYITGRLDDSFFDIWLGYTTLKCTTISCQVEIDRTQFSWSD
ASSGTYTNWGTDPVQPDLSEKQNGICVAVIKEAGQDFGKWKSHICRYERPYMCKRALNTI
CPPGWISFSGNCYWVVSNKMFLTSWHEAQQKCSSEGANLVTIKTQEEQYFINTHLPDLNQ
GEVPDVWIGVADEDQDGTFRWVDKTDITFSNWKPSFPKNTVNLWDCGQIYTGDFSGKWET
TNCFKNLGYICKMVGGQNVKPTSVPDSHCDAGYLLYGDYCYHFETEMVKNWLDAESYCAS
QRGHLASFHTQEELSFITTHMPAPSWVGLSDSRTEGVWVWSDGTPSDFLPWAPNQPDNWQ
GNEDCSNIRGFNHHEAGLLNDEFCTSTLEFVCRKAKGQGPPPIPPTSGPDWNEKCGSWMS
DPFNDYCYLFNYLSMRKWADARADCVNQKGDLLSITEPFEQAFIQSKVQLIPTGVSVWMG
GHDSITEGGWEWTDASPFRYIHWNAGNPDNYGGEDCLSMLINTGYWNDDNCDYNRGYICK
RRGNTPVSPPPHDGFETAYICEDSSAVLHCDTNSVINIQSAFFGRKSDKICPHQEGASGT
CTVGGILPLVRKACDNRPFCFLYAYTETDPCPSISKYLEVVYSCEQNVCLRGLGVEDGNV
TDSMLSASSSQSSHGPNGARLNGGSCWMPSNPLNSWIQVNLGEAKKITGVVIQGCPSADH
WVTKFKIQHSMDGSKWTEYKDDGGVFTGCMDRNTPETQLLGTPVSAQYVRILPQEFNGQT
GLRFDILGCIPDYAVSCDAKPNFNFANDLMTVHCPAGCAQVLYTVYGSGVYRGDSNICAA
GIHAGVILNDIGGDCTMLKEPGQNFYSGSTKNGITSRQYDGNYEISYQFADKELSCSGPD
WYEFGEFCYKPYGDKKTWHAARGECRKLGADLVSIQSMTEQSWLESYLYMATNDVWIGLN
DMGFSGLFSWSDNHWVTFTYWAPGEPNNHQGFNEDCVEMFYQTGRWNDVPCTELNTYICK
MPKAHYLLPSVMPTVYGCTQGWDAYGYSCYWMEETARTWSDAKAFCEQQNSKLLHIGDIY
EQSHFTVKLARYTGLWWIGLRATGDSGGVDYIWDNGAPLTFTHWDRNQPDNHAGTCVAMT
TGLTGGFWDDKPCTELFPFVCETPRPDITPPTKPPTPPPSLDCADGWTAERHFRNCYKLF
MVDFSKKKSWPAAREDCISRGADLVSIHNMEEESFLSTYTKGKSKWIGLKHNPTDGGYHW
SDATPVSHTNWGHGEPNNHEGREDCVEMVSNTNGTSSWWNDLNCDAHQDWICMISKGKKP
IVPPVPPPPVPAPDCGTNAVWRKNNGICYYYNDTDIVDFQTAMSRCYDEKALLVSILNKD
EQAYINTMIGTGRAESSWIGMVVFGIAADQYQWVDWSPVTYVFWGLGEPNNANGEEQCVQ
MNRHQGNWNDVNCARTNAGYLCKKYPNEDHTPPPPTQPWTGYCPAGWMLFRNKCFMFQGH
GHGMKANWTSARSWCQSKGAELAVIDNQYENDFVSSYLRDLRLPTWIGLTDSLVEGGFGW
SDGVSPVLYTNWADKEPNNNGGREHCTAITHNYLVSGRWNDDLCTEEHSWVCSMKKSSSI
APPAPTKNPCPSGYISWYKNCYKLVEEPKTWEAAQVACEQEGGNLASVDMSYDQAFVAGV
VLQGKADAWIGLRRKDDSSSYTWTDGWSVFFTHWGPGEPSNHKTEGCVAMRADPIFHGTW
NDTDCNSAKAYICKISSESPPPTPAPGDGKCLLGWVPFGRYCYFVYNGPQGFSWPEARHY
CQIVRGDLVSIHSRPEVEFILKMNYTRVHNVWIGLTRDNNFGWSWTDMQSLAFLNWAPNE
PNEAFHNGDVGGENCVEMYPDGQWNDNHCMQKRGYACRHRQYYTTDGGGIVIPTDAPQAS
GAGLIAGAVIGAIVVFTLIFGLLYYVFSIRGVKLSDVSFPTRTGRSVDVPAFNNPNFGGE
SET
NT seq
6492 nt
NT seq
+upstream
nt +downstream
nt
atgctgctattgcttttcaccctctgtagtctgctcagttgtgccttcagtcagtgtgag
gagggatggagggcctatgaggacaagtgttactacttctctaccaacacaaagtcctgg
gatgatgcccgcacagactgtgtgggacgggggagccatctgatgagcatcctggacatt
cctgagaggacatgggtacggactcaggttggtacagagattttctggatcggtctgaat
gacattgctgctgagggagtgtgggagtggactgacgggagcaccttcctccccttctta
gcatactggaaaccagggaatcctgacaactgggaggacaacgaggattgtggggaggtg
gtcgggggagagcaaggacgatggaatgatgacgtctgcactagccggcggaagtatata
tgcaagcgccccaaccctaatcctccaacaatgtgcgacacagccaacggatggagccag
tatggatccaactgctacaaactaaagacagacaccaggaagagctggttgggagccaga
cacgactgtgttagagatggggcagacctggtgtccattgcatcaccggaagaggagcag
tacatcacaggacgactggacgattccttctttgacatttggcttggctacaccactctg
aaatgcacaacaatatcatgtcaggttgaaattgacaggactcagttcagctggtctgat
gcttcttctggtacctacaccaactggggaactgatcctgtgcagccagatctcagtgaa
aagcagaacgggatttgtgtggcagtgatcaaggaggcaggacaggactttgggaagtgg
aagtcccatatatgccgctatgagcgtccttacatgtgcaaaagagcactcaacacaatt
tgccctcccggttggatcagcttcagtgggaactgttactgggtggtcagcaacaagatg
ttcctgaccagttggcatgaggctcaacagaagtgttcaagtgagggggctaacctggtg
acaattaagactcaagaggagcaatacttcatcaacactcatctaccagaccttaatcaa
ggggaagtgccggatgtctggattggtgttgcagatgaggaccaggatggtacattcaga
tgggtggacaaaacagatattacgttctccaattggaaacctagctttcccaagaacaca
gtaaacctctgggactgtggtcaaatctacaccggagatttctctggaaaatgggaaaca
accaattgcttcaaaaacctgggatacatttgtaaaatggtggggggtcaaaatgttaag
ccgacctctgttccagattcacattgtgatgctgggtatcttctgtatggagactactgc
tatcactttgagactgaaatggtgaaaaattggctagatgcagagagttactgtgccagt
caaagaggccacctggcaagttttcatactcaagaggaactgagcttcataactactcat
atgcccgcaccatcctgggttggtcttagtgacagtaggacagaaggagtgtgggtctgg
tcggatgggactccatccgactttctaccatgggcgcccaaccagcctgataactggcag
ggcaatgaggattgttccaatattaggggattcaaccaccatgaagcagggctactcaac
gatgagttctgtacctccacattggaatttgtctgcagaaaagcaaaaggtcaaggaccc
ccacccatacctcccacatcggggccagattggaatgagaagtgtggctcttggatgtca
gacccgttcaatgactactgctacctgtttaactacctgtccatgaggaaatgggctgat
gcacgtgctgactgtgtaaaccagaaaggggaccttctcagcatcaccgagccctttgag
caagccttcattcaatctaaggtccagctgattcctacgggggtctccgtgtggatgggg
ggacatgactccattacagaggggggttgggagtggactgatgcctctcctttcagatac
atccactggaatgcaggcaacccagacaactatggaggagaggattgcctttccatgctt
atcaacaccggctactggaacgatgacaactgtgattacaatagaggatacatatgcaag
cgcagaggaaacacaccagtttctcctccaccccacgatgggtttgaaacggcttacatc
tgtgaggactccagtgctgtcctccactgtgataccaacagtgtcatcaacattcagtca
gctttctttggccgcaagagtgacaagatctgcccccaccaggaaggagcttcaggaaca
tgcactgtaggtggcatcctgcctttggtacgaaaggcgtgtgacaaccgacccttctgc
ttcttgtatgcctatactgaaactgacccctgcccttcaatctccaaatacctggaagtg
gtgtacagctgtgagcaaaatgtgtgtctgaggggacttggtgtggaggatggtaacgtc
actgactccatgctgtccgcctcgtcctcacagagttcacacggtccgaacggagctcgt
ctgaatggtggctcctgctggatgccatcaaatcccttaaactcctggatccaggtgaac
ctcggtgaggccaaaaagatcacaggtgttgtgatccaggggtgtcctagtgcagatcac
tgggtgactaaattcaagatccagcacagtatggatggaagcaaatggactgaatacaaa
gacgatggaggggtattcacaggctgcatggacagaaacaccccagagacacagcttctg
ggcactcctgtctctgcccagtatgtcaggattcttccccaggaattcaacggacagact
ggtcttcgctttgacatcctgggatgtatacctgactatgctgtgtcctgtgatgcaaag
cccaactttaactttgcaaatgatcttatgaccgtacactgcccagcaggatgtgcgcaa
gtactatatactgtttatggctctggcgtatatcgtggggactccaacatctgtgcagct
ggtatccatgcaggagtaatcctgaatgatatcggaggagactgtactatgttgaaagaa
ccaggccagaacttctacagtggctccaccaagaacggaatcacctccaggcagtatgat
gggaactatgaaatttcataccagtttgcagataaagagttgagttgctcggggcctgac
tggtatgaatttggggagttctgctacaagccctacggagataaaaagacatggcatgca
gcccgtggagagtgcaggaagctgggagctgacctggtgtccattcagtccatgacagaa
cagagctggctggagagctacctttacatggccaccaatgatgtgtggattgggctgaat
gatatgggcttctcaggcctgttctcctggtcagacaaccactgggtcactttcacctac
tgggcaccaggagaacccaacaatcatcaaggcttcaatgaggactgtgtggagatgttt
tatcagactggtagatggaatgatgtcccctgcacagaactgaacacttatatatgcaag
atgcccaaagcccactacctgcttccttctgtcatgcccactgtgtacggatgcacacag
ggctgggacgcctatggctattcctgttactggatggaagagaccgccagaacctggtca
gacgccaaggccttctgtgagcagcaaaacagcaaacttctacacattggggacatttat
gaacagtcccacttcacggtgaaactggctagatacactggtttgtggtggattggactg
agggccacgggtgactcaggaggggtggattacatctgggataatggagcacctctcacc
ttcacacactgggatcgaaaccagccagataaccatgcgggaacctgcgttgccatgact
acgggccttactggtgggttctgggatgacaagccatgcactgagttgttcccattcgtg
tgtgagacaccaaggcctgacatcaccccgcccactaaacctccaactcctcccccttca
ttggactgtgcggacggttggacggctgagcgacacttcaggaactgctacaagctcttc
atggtggacttctccaagaagaagagttggcctgcagcccgtgaagactgtatctccagg
ggggcagaccttgtcagtatccataacatggaggaagagagcttcctgtccacgtacacc
aaggggaagtccaagtggatcggtctgaaacacaaccctacagatggaggttaccactgg
agtgacgctactcctgtgagccacaccaactggggacatggggagcccaacaaccatgag
ggtcgtgaggactgtgtagagatggtgagcaacacaaatgggacgtcctcttggtggaac
gatctcaactgtgatgcccatcaggactggatctgcatgatctccaaggggaagaaaccc
atcgtgcctccagttccccctcctcctgttccagcacctgactgcggtaccaatgctgtc
tggaggaagaacaatggcatctgctactactacaatgacaccgacatagtagacttccag
acagctatgtcccgctgctacgatgagaaggctctactggtctccatcttaaacaaagat
gaacaggcgtacatcaacacgatgattgggacgggacgggctgaatcatcatggattgga
atggttgtgtttgggatcgcagcagaccagtaccagtgggtggactggtcccctgtcaca
tatgttttctggggtctgggagagcctaataatgccaatggggaggaacagtgtgtccag
atgaacagacatcaaggtaactggaatgatgtcaactgcgcccgtaccaatgcaggttac
ctgtgtaagaaataccctaatgaagaccacactccacctcctcccacccaaccctggacg
ggatactgcccagcgggatggatgctgttccgaaacaagtgctttatgttccaagggcac
gggcacgggatgaaagccaactggacctctgctcggagttggtgccaaagtaaaggagca
gaattagctgtcatcgacaatcaatatgagaacgactttgtgtccagctatctaagggat
ctgaggctgccaacatggattggcttgacagacagcctggtggagggagggtttggctgg
agtgatggtgtgagtccagtgttgtacaccaactgggccgacaaggaacccaacaacaat
ggaggacgggagcactgcaccgccattacccataactacttggtgagtggacgctggaat
gatgacttgtgcactgaggaacatagctgggtctgctccatgaagaaatcaagcagtata
gctccgccagctccaaccaaaaacccctgcccctctggttacatctcctggtataagaac
tgctacaagctggtggaggagccgaagacgtgggaggcagctcaggtggcctgtgagcag
gaaggtggtaacttggccagcgtagacatgagctacgaccaggcctttgtggccggggtt
gtactccagggcaaagcagatgcatggattggactaagacgcaaggatgatagcagttca
tatacatggacagacggctggtcagtgttcttcactcactggggacctggggagcctagt
aaccacaaaacagagggctgtgtagcaatgcgtgcagatcctatcttccatggaacatgg
aacgacaccgattgtaattctgccaaggcctatatctgcaagatctcctcagagtctcct
cctccaaccccagcccctggagatgggaaatgccttttaggctgggttccctttggtcgc
tactgctactttgtatacaacgggccccagggattctcctggccagaggcaagacactac
tgccaaatagtgagaggagacctggtgtccatccacagtagaccagaggtggagttcatc
ttgaaaatgaattacaccagagtacacaacgtctggatcggcctgaccagggacaacaac
tttggctggagttggacagacatgcagtccttggctttcctaaactgggcgcctaacgag
cccaacgaagccttccacaatggagacgtgggaggagagaactgtgtcgagatgtaccct
gacggacaatggaatgataaccactgtatgcagaagagaggatatgcctgtcgccaccgc
caatactacaccacagatggcggtggtatagtcattcccaccgatgctccccaggctagc
ggtgctggactgatcgctggggctgtgattggggccattgttgtcttcaccttgatattt
ggactgctttattacgtcttcagcatcagaggagtcaagctgagtgacgtcagcttccca
acgagaacaggaaggagtgttgatgtgcctgcttttaacaaccccaactttggaggagaa
tcggaaacatga
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integrated database retrieval system
