Oncorhynchus tshawytscha (Chinook salmon): 112257389
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Entry
112257389 CDS
T05605
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
otw
Oncorhynchus tshawytscha (Chinook salmon)
Pathway
otw00310
Lysine degradation
otw00514
Other types of O-glycan biosynthesis
otw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
otw00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112257389
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
112257389
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
otw01003
]
112257389
Enzymes [BR:
otw01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
112257389
Glycosyltransferases [BR:
otw01003
]
O-Glycan biosynthesis
O-linked Gal type
112257389
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
112257389
NCBI-ProteinID:
XP_042182480
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All DBs
Position
LG09:complement(12640875..12654128)
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AA seq
590 aa
AA seq
DB search
MFLWVLVLGAFVSRSECYFSEEKYPEESKMQPPTVVIAIIARNAAHSLPYYLGALERLNY
PKARISVWAATDHNADNTTAVLREWLTVMQQFYHYVEWRPMEHPTSYPGEMGPKYWSNGR
YEYLMKLKQAALNFAKTRWADYILYADTDNILTNPETLNLLIAENKSVVAPMLDSQGAYS
NYWCGITPQGYYRRTAEYFPTRQRHRLGCYPVPMVHSTFLLDMRKTGMKKLAFHPPHLDY
SWPFDDIIVFAFSCRVSEVQMYLCNKVRYGYLNVPAKPHHTIEDDSISFSHLILEATIDG
PPMAPSKYVSLFPKQRDLMGFDEVYLINLRRRQDRRDRMLYSLNELEIDVKVVDAIDGGA
LNSSDIKILGVDILPGYYDPFSRRTLTKGEVGCFLSHYYIWKEMVDQQMDKALIFEDDVR
FQANFKRRVLRLMEEVEMVELDWDIIYLGRKQVKPGDEEVVENVRNLVVADYSYWTLSYA
ISLQGAQKLLNAEPLSKMLPVDEFLPIMYDKHTNENYKSHYPNRNLQAFSTRPLLVQPAQ
YAGDPKWVSDTETSTLWDDDNVRTDWRGSHKTLKGAPQPDMLQTSYKDEL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttgggttttagttttaggggccttcgtttctagatcagaatgttacttttca
gaggagaaatatccagaagaatcgaaaatgcagccgccaacggttgttattgcgatcatt
gctcggaacgcggcgcattccttgccttactacctcggagcattggagagactgaactat
cccaaagcacgcatttctgtttgggcagcgacagatcacaatgctgacaacactacagct
gttctgagagaatggctgacagtcatgcaacagttttatcactacgtggaatggaggcct
atggagcatcctacgtcctacccaggagagatggggcctaaatactggagcaacggcaga
tatgaatacctgatgaaacttaaacaggctgctctcaacttcgccaagacacgctgggct
gactacatactgtacgctgacacagacaacatcctgaccaacccagagactctgaacctt
ctgatagcagagaacaagtctgttgtggcccccatgctggactctcagggagcctactcc
aactactggtgcggcatcactccccaaggttactaccggcgtacagctgagtatttcccc
accagacagcgccaccggctgggctgctacccggtgcccatggtccactctaccttcctg
ctggacatgaggaagacgggtatgaagaagctggccttccaccctcctcacctggactac
tcctggcccttcgatgacatcatcgtcttcgccttctcctgccgcgtctcagaggtgcag
atgtacctgtgtaacaaggtgaggtatggttacctgaacgtcccagccaagcctcaccac
accatagaggacgacagcatcagctttagtcatctcatactggaggccaccatcgatggc
ccccccatggccccctccaaatacgtgagtctcttccccaaacagagagacctcatgggg
ttcgatgaggtgtacctgatcaacctgcgtcgtcgtcaggaccgtagagacaggatgctg
tattctctcaatgagctggagatagatgtcaaggtggtggacgccatcgatggaggagct
ctgaacagcagtgatataaagattctgggagtggacatactgcctggttactatgacccg
ttctctcgccgtaccctgacaaaaggagaggtgggatgcttcctgagtcattactacatc
tggaaggagatggtagaccagcagatggacaaggcgctgatcttcgaggatgacgtgcgt
ttccaggccaacttcaagcggcgcgtacttcgtctgatggaggaggtggagatggtggaa
ctggactgggacatcatttacctgggccgtaagcaggtgaagccaggtgatgaggaggtg
gtggagaacgtgaggaacctggtggtagcagactattcctactggaccctgtcctatgcc
atctctctccagggggcccagaagctgctcaacgctgaacccctctccaagatgctgccc
gtcgatgaattcttacccatcatgtacgacaaacacaccaatgagaactacaagtcccac
tatcctaaccgtaacctgcaggcgttctccacacgccccctactggtgcaaccagcccaa
tacgccggggaccccaagtgggtgagcgacacagagacctccacgctgtgggacgacgac
aacgtgcgaacagactggaggggctcccacaaaacgctgaagggggctccccaacccgac
atgctgcagacgtcatataaagatgagctgtag
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